CBE Database Visualizer

Select Ligand, Chain or interface (right frame) to visualize contacts of 5mo4

(Residues within 4 Angstroms of the ligand are orange)


Visualisation option: mouse right button

Entities Contact Visualizer for 5mo4

ABL1 kinase (T334I_D382N) in complex with asciminib and nilotinib
(X-RAY DIFFRACTION)



Contacts (< 4A) Between Entities (1 Chain(s) & 2 Ligand(s)) :

All Entities CHAIN_A_1
AY7_A_3 AY7_A_3/CHAIN_A_1
NIL_A_2 NIL_A_2/CHAIN_A_1



Entities Features:

TypeWeightLengthInfo
AY7_A_3 non-polymer 449.838 . asciminib
CHAIN_A_1 polymer 56183.176 492 Tyrosine-protein kinase ABL1
NIL_A_2 non-polymer 529.516 . Nilotinib


Additional CBE information:

The CBE (Contacts Between Entities) database is built from the mmCIF database.
All the molecules (entities) were extracted of the structure.
For each main chain (protein chain), amino acid in contact with ligand(s) have been obtained.
The CBE is accessible from the PDB entries.
The ligand code is :XXX_Y_Z were:
XXX = molecule short name
Y = Chain in pdb file
Z = Entity Number

[5mo4.cbe]
[5mo4.fasta)]
[5mo4.pdb)]