CBE Database Visualizer

Select Ligand, Chain or interface (right frame) to visualize contacts of 3e37

(Residues within 4 Angstroms of the ligand are orange)


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Entities Contact Visualizer for 3e37

Protein farnesyltransferase complexed with bisubstrate ethylenediamine scaffold inhibitor 5
(X-RAY DIFFRACTION)



Contacts (< 4A) Between Entities (2 Chain(s) & 3 Ligand(s)) :

All Entities CHAIN_A_1 CHAIN_B_2
ED5_B_4 ED5_B_4/CHAIN_A_1 ED5_B_4/CHAIN_B_2
SUC_B_5 SUC_B_5/CHAIN_A_1 SUC_B_5/CHAIN_B_2
ZN_B_3 No contact ZN_B_3/CHAIN_B_2



Entities Features:

TypeWeightLengthInfo
CHAIN_A_1 polymer 44459.961 315 Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha
CHAIN_B_2 polymer 48822.883 410 Protein farnesyltransferase subunit beta
ED5_B_4 non-polymer 606.782 . TERT-BUTYL 4-({(2-{(4-CYANOPHENYL)[(1-METHYL-1H-IMIDAZOL-5-YL)METHYL]AMINO}ETHYL)[(2-METHYLPHENYL)SULFONYL]AMINO}METHYL)PIPERIDINE-1-CARBOXYLATE
SUC_B_5 non-polymer 342.299 . SUGAR (SUCROSE)
ZN_B_3 non-polymer 65.380 . ZINC ION


Additional CBE information:

The CBE (Contacts Between Entities) database is built from the mmCIF database.
All the molecules (entities) were extracted of the structure.
For each main chain (protein chain), amino acid in contact with ligand(s) have been obtained.
The CBE is accessible from the PDB entries.
The ligand code is :XXX_Y_Z were:
XXX = molecule short name
Y = Chain in pdb file
Z = Entity Number

[3e37.cbe]
[3e37.fasta)]
[3e37.pdb)]