CBE Database Visualizer

Select Ligand, Chain or interface (right frame) to visualize contacts of 1ho5

(Residues within 4 Angstroms of the ligand are orange)


Visualisation option: mouse right button

Entities Contact Visualizer for 1ho5

5'-NUCLEOTIDASE (E. COLI) IN COMPLEX WITH ADENOSINE AND PHOSPHATE
(X-RAY DIFFRACTION)



Contacts (< 4A) Between Entities (2 Chain(s) & 8 Ligand(s)) :

No contact
No contact
No contact
No contact
No contact
No contact
No contact
No contact



Entities Features:

TypeWeightLengthInfo
ADN_A_9 non-polymer 267.244 . ADENOSINE
ADN_B_10 non-polymer 267.244 . ADENOSINE
CHAIN_A_1 polymer 58278.207 525 5'-NUCLEOTIDASE
CHAIN_B_2 polymer 58278.207 525 5'-NUCLEOTIDASE
MN_A_3 non-polymer 54.938 . MANGANESE (II) ION
MN_A_4 non-polymer 54.938 . MANGANESE (II) ION
MN_B_6 non-polymer 54.938 . MANGANESE (II) ION
MN_B_7 non-polymer 54.938 . MANGANESE (II) ION
PO4_A_5 non-polymer 94.971 . PHOSPHATE ION
PO4_B_8 non-polymer 94.971 . PHOSPHATE ION


Additional CBE information:

The CBE (Contacts Between Entities) database is built from the mmCIF database.
All the molecules (entities) were extracted of the structure.
For each main chain (protein chain), amino acid in contact with ligand(s) have been obtained.
The CBE is accessible from the PDB entries.
The ligand code is :XXX_Y_Z were:
XXX = molecule short name
Y = Chain in pdb file
Z = Entity Number

[1ho5.cbe]
[1ho5.fasta)]
[1ho5.pdb)]