@TOME V2.3
(Mar 2018)

Ref. - - Doc.
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3D Common Core:

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Modeller Result :

Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : GTR12_HUMAN: (2018-03-06 )
MVPVENTEGPSLLNQKGTAVETEGSGSRHPPWARGCGMFTFLSSVTAAVSGLLVGYELGIISGALLQIKTLLALSCHEQEMVVSSLVIGALLASLTGGVLIDRYGRRTAIILSSCLLGLGSLVLILSLSYTVLIVGRIAIGVSISLSSIATCVYIAEIAPQHRRGLLVSLNELMIVIGILSAYISNYAFANVFHGWKYMFGLVIPLGVLQAIAMYFLPPSPRFLVMKGQEGAASKVLGRLRALSDTTEELTVIKSSLKDEYQYSFWDLFRSKDNMRTRIMIGLTLVFFVQITGQPNILFYASTVLKSVGFQSNEAASLASTGVGVVKVISTIPATLLVDHVGSKTFLCIGSSVMAASLVTMGIVNLNIHMNFTHICRSHNSINQSLDESVIYGPGNLSTNNNTLRDHFKGISSHSRSSLMPLRNDVDKRGETTSASLLNAGLSHTEYQIVTDPGDVPAFLKWLSLASLLVYVAAFSIGLGPMPWLVLSEIFPGGIRGRAMALTSSMNWGINLLISLTFLTVTDLIGLPWVCFIYTIMSLASLLFVVMFIPETKGCSLEQISMELAKVNYVKNNICFMSHHQEELVPKQPQKRKPQEQLLECNKLCGRGQSRQLSPET

Atome Classification :

(11 SA) .........10........20........30........40........50........60........70.--------.--------.--------------.--------------....------80-------......--------...90........100.......110-------.....---..120--------------...------------------.------------------..---..130.......140.......150.......160.......170.......180.......190.-------.-------.......200.......210.......220....-..-.230........240.......250-.---...---.....260.......270.......280-.......290.......300.....--..310.......320.......330.......340.......350...--....360.......370.......380.......390.......400.......410.......420.......430.......440.......450.......460.......470.......480.......490.......500.......510.......520----.........530.......540.......550.......560.......570.......580.......590.......600.......610.....
(Atome) (Ident) (Tito) (Num) (QMean) (Ligand) (Uniprot) MVPVENTEGPSLLNQKGTAVETEGSGSRHPPWARGCGMFTFLSSVTAAVSGLLVGYELGIISGALLQIKTLL--------A--------L--------------S--------------CHEQ------E--------MVVSSL--------VIGALLASLTGGVLIDRYGRRTAIIL-------SSCLL---GLGS---------------LVL------------------I------------------LS---LSYTVLIVGRIAIGVSISLSSIATCVYIAEIAPQHRRGLLVSLNELMIVIGILSAYISNYAFA--N-------V-------FHGWKYMFGLVIPLGVLQAIAMYFLPPSPRFLVM-KG-QE-GAASKVLGRLRALSDTTEEL---T---VIK---SSLKDEYQYSFWDLFRSKDNMRTRIMIG-LTLVFFVQITGQPNILFYASTVLKS--VGFQSNEAASLASTGVGVVKVISTIPATLLVDHVGSKTFLCIGSSVMA--ASLVTMGIVNLNIHMNFTHICRSHNSINQSLDESVIYGPGNLSTNNNTLRDHFKGISSHSRSSLMPLRNDVDKRGETTSASLLNAGLSHTEYQIVTDPGDVPAFLKWLSLASLLVYVAAFSIGLGPMPWLVLSEIFPGGIRGRAMALTSSMNWGINLLISLTFLT------VTDLIGLPWVCFIYTIMSLASLLFVVMFIPETKGCSLEQISMELAKVNYVKNNICFMSHHQEELVPKQPQKRKPQEQLLECNKLCGRGQSRQLSPET
21 Fugue 79.4031%-127 - C5 - - 4GC0 XYLE_ECOLI A:[5-479] ----------------------------------YNSSYIFSITLVATLGGLLFGYDTAVISGTVESLNTVFVAPQNLSES--------A--------------A--------------NSLL------G--------FCVASA--------LIGCIIGGALGGYCSNRFGRRDSLKI-------AAVLF---FISG---------------VGSAWPELGFTSINPDNTVPVY------------------LA---GYVPEFVIYRIIGGIGVGLASMLSPMYIAELAPAHIRGKLVSFNQFAIIFGQLLVYCVNYFIA--RSGDASWLN-------TDGWRYMFASECIPALLFLMLLYTVPESPRWLMS-RG-KQ-EQAEGILRKIMGNTLATQAV---Q---EIK---HSLDHGRKTGG----RLLMFGVGVIVIG-VMLSIFQQFVGINVVLYYAPEVFKT--LGA-STDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMA--IGMFSLGTAFYTQAP------------------------------------------------------------------------------------------GIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWLANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMWKFVPETKGKTLEELEALWE----------------------------------------------------
33 HHSearch 78.5532%-128 - C5 - - 4GBY XYLE_ECOLI A:[14-468] -------------------------------------------TLVATLGGLLFGYDTAVISGTVESLNTVF--------VAPQNLSESA--------------A--------------NSLL------G--------FCVASA--------LIGCIIGGALGGYCSNRFGRRDSLKI-------AAVLF---FISG---------------VGS------------------AWPELGFTSINPDNTVPVYLA---GYVPEFVIYRIIGGIGVGLASMLSPMYIAELAPAHIRGKLVSFNQFAIIFGQLLVYCVNYFIA--R-------SGDASWLNTDGWRYMFASECIPALLFLMLLYTVPESPRWLMS-RG-KQ-EQAEGILRKIMGNTLATQAV---Q---EIK---HS-LDHGRKTGGRLLM---FGVGVIVIG-VMLSIFQQFVGINVVLYYAPEVFKT--LGAST-DIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMA--IGMFSLGTAFYTQA------------------------------------------------------------------------------------------PGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWLANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMWKFVPETKG---------------------------------------------------------------
34 HHSearch 78.5332%-130 - C5 - - 4GC0 XYLE_ECOLI A:[14-468] -------------------------------------------TLVATLGGLLFGYDTAVISGTVESLNTVF--------VAPQNLSESA--------------A--------------NSLL------G--------FCVASA--------LIGCIIGGALGGYCSNRFGRRDSLKI-------AAVLF---FISG---------------VGS------------------AWPELGFTSINPDNTVPVYLA---GYVPEFVIYRIIGGIGVGLASMLSPMYIAELAPAHIRGKLVSFNQFAIIFGQLLVYCVNYFIA--R-------SGDASWLNTDGWRYMFASECIPALLFLMLLYTVPESPRWLMS-RG-KQ-EQAEGILRKIMGNTLATQAV---Q---EIK---HS-LDHGRKTGGRLLM---FGVGVIVIG-VMLSIFQQFVGINVVLYYAPEVFKT--LGAST-DIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMA--IGMFSLGTAFYTQA------------------------------------------------------------------------------------------PGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWLANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMWKFVPETKG---------------------------------------------------------------
35 HHSearch 72.3328%-106 - C5 - - 5EQG GTR1_HUMAN A:[10-455] -------------------------------------GRLMLAVGGAVLGSLQFGYNTGVINAPQKVIEEFY--------N--------Q--------------TWVHRYGESILPTTLTTLW------S--------LSVAIF--------SVGGMIGSFSVGLFVNRFGRRNSMLM-------MNLLA---FVSA---------------VLM------------------G------------------FSKLGKSFEMLILGRFIIGVYCGLTTGFVPMYVGEVSPTALRGALGTLHQLGIVVGILIAQVFGLDSIMGN-------K--------DLWPLLLSIIFIPALLQCIVLPFCPESPRFLLI-NRNEE-NRAKSVLKKLRGTADVTHDL---QEMKEES---RQMMREKKVTILELFRSPA-YRQPILIA-VVLQLSQQLSGINAVFYYSTSIFEK--AGV---QQPVYATIGSGIVNTAFTVVSLFVVERAGRRTLHLIGLAGMA--GCAILMTIALALLEQ------------------------------------------------------------------------------------LPW--MSYLSIVAIFGFVAFFEVGPGPIPWFIVAELFSQGPRPAAIAVAGFSNWTSNFIVGMCFQY------VEQLCGPY-VFIIFTVLLVLFFIFTYFKVPET-----------------------------------------------------------------
31 HHSearch 71.9828%-103 - C5 - - 4ZW9 GTR3_HUMAN A:[29-479] ------------------------------------TPALIFAITVATIGSFQFGYNTGVINAPEKIIKEFI--------T--------KTLTDKGNAPPSEVLL--------------TSLW------S--------LSVAIF--------SVGGMIGSFSVGLFVNRFGRRNSMLI-------VNLLA---VTGG---------------CFM------------------GLCK---------------VA---KSVEMLILGRLVIGLFCGLCTGFVPMYIGEISPTALRGAFGTLNQLGIVVGILVAQIFGLEFILGS-------E--------ELWPLLLGFTILPAILQSAALPFCPESPRFLLI-NR-KEEENAKQILQRLWGTQDVSQDIQEMK---DES---ARMSQEKQVTVLELFR------VSSYRQPIIISIVLQLSQQLSGINAVFYYSTGIFKDAG-VQEPIYATIGAGVVNTIFTVVSLFLVERAGRRTLHMIGLGGMA--FCSTLMTVSLLLKDN---------------------------------------------------------------------------------YNG--M--SFVCIGAILV-FVAFFEIGPGPIPWFIVAELFSQGPRPAAMAVAGCSNWTSNFLVGLLFPS------AAHYLGAY-VFIIFTGFLITFLAFTFFKVPETRGRT-------------------------------------------------------------
2 PsiBlast_PDB 57.6829%-117 - C5 - - 4GBY XYLE_ECOLI A:[9-360] --------------------------------------YIFSITLVATLGGLLFGYDTAVISGTVESLNTVF--------V--------A--------------P--------------QNLS------ESAANSLLGFCVASA--------LIGCIIGGALGGYCSNRFGRRDSLKI-------AAVLFFISGVGSAWPELGFTSINPDNTVPV------------------Y------------------LA---GYVPEFVIYRIIGGIGVGLASMLSPMYIAELAPAHIRGKLVSFNQFAIIFGQLLVYCVNYFIA--R-------SGDASWLNTDGWRYMFASECIPALLFLMLLYTVPESPRWLMS-RG-KQ-EQAEGILRKIMGNTLATQAV---Q---EIK---HSL-DHGRKTGGRLLMFGVGV---IVIG-VMLSIFQQFVGINVVLYYAPEVFKT--LG-ASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMA--IGMFSLG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
4 PsiBlast_PDB 57.6529%-115 - C5 - - 4GC0 XYLE_ECOLI A:[9-360] --------------------------------------YIFSITLVATLGGLLFGYDTAVISGTVESLNTVF--------V--------A--------------P--------------QNLS------ESAANSLLGFCVASA--------LIGCIIGGALGGYCSNRFGRRDSLKI-------AAVLFFISGVGSAWPELGFTSINPDNTVPV------------------Y------------------LA---GYVPEFVIYRIIGGIGVGLASMLSPMYIAELAPAHIRGKLVSFNQFAIIFGQLLVYCVNYFIA--R-------SGDASWLNTDGWRYMFASECIPALLFLMLLYTVPESPRWLMS-RG-KQ-EQAEGILRKIMGNTLATQAV---Q---EIK---HSL-DHGRKTGGRLLMFGVGV---IVIG-VMLSIFQQFVGINVVLYYAPEVFKT--LG-ASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMA--IGMFSLG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
3 PsiBlast_PDB 57.2829%-114 - C5 - - 4GBZ XYLE_ECOLI A:[9-360] --------------------------------------YIFSITLVATLGGLLFGYDTAVISGTVESLNTVF--------V--------A--------------P--------------QNLS------ESAANSLLGFCVASA--------LIGCIIGGALGGYCSNRFGRRDSLKI-------AAVLFFISGVGSAWPELGFTSINPDNTVPV------------------Y------------------LA---GYVPEFVIYRIIGGIGVGLASMLSPMYIAELAPAHIRGKLVSFNQFAIIFGQLLVYCVNYFIA--R-------SGDASWLNTDGWRYMFASECIPALLFLMLLYTVPESPRWLMS-RG-KQ-EQAEGILRKIMGNTLATQAV---Q---EIK---HSL-DHGRKTGGRLLMFGVGV---IVIG-VMLSIFQQFVGINVVLYYAPEVFKT--LG-ASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMA--IGMFSLG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
8 PsiBlast_PDB 53.0627% -83 - C5 - - 4ZWB GTR3_HUMAN A:[39-388] ----------------------------------------------ATIGSFQFGYNTGVINAPEKIIKEFI--------T--------K--------------T--------------LTDKGNAPPSE--------VLLTSLWSLSVAIFSVGGMIGSFSVGLFVNRFGRRNSMLIVNLLAVTGGCFM---GLCK---------------V----------------------------------------A---KSVEMLILGRLVIGLFCGLCTGFVPMYIGEISPTALRGAFGTLNQLGIVVGILVAQIFGLEFIL-G-------S-------EELWPLLLGFTILPAILQSAALPFCPESPRFLLINRK-EE-ENAKQILQRLWGTQDVSQDI---Q---EMKDESARMSQEKQVTVLELFRV-SSYRQPIIIS-IVLQLSQQLSGINAVFYYSTGIFKD--AGVQEPIYATI---GAGVVNTIFTVVSLFLVERAGRRTLHMIGLGGMAFCSTLMTVSLLLKDNYNGMSFVC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
7 PsiBlast_PDB 53.0527% -83 - C5 - - 4ZW9 GTR3_HUMAN A:[39-388] ----------------------------------------------ATIGSFQFGYNTGVINAPEKIIKEFI--------T--------K--------------T--------------LTDKGNAPPSE--------VLLTSLWSLSVAIFSVGGMIGSFSVGLFVNRFGRRNSMLIVNLLAVTGGCFM---GLCK---------------V----------------------------------------A---KSVEMLILGRLVIGLFCGLCTGFVPMYIGEISPTALRGAFGTLNQLGIVVGILVAQIFGLEFIL-G-------S-------EELWPLLLGFTILPAILQSAALPFCPESPRFLLINRK-EE-ENAKQILQRLWGTQDVSQDI---Q---EMKDESARMSQEKQVTVLELFRV-SSYRQPIIIS-IVLQLSQQLSGINAVFYYSTGIFKD--AGVQEPIYATI---GAGVVNTIFTVVSLFLVERAGRRTLHMIGLGGMAFCSTLMTVSLLLKDNYNGMSFVC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
9 PsiBlast_PDB 52.8327% -84 - C5 - - 4ZWC GTR3_HUMAN A:[39-388] ----------------------------------------------ATIGSFQFGYNTGVINAPEKIIKEFI--------T--------K--------------T--------------LTDKGNAPPSE--------VLLTSLWSLSVAIFSVGGMIGSFSVGLFVNRFGRRNSMLIVNLLAVTGGCFM---GLCK---------------V----------------------------------------A---KSVEMLILGRLVIGLFCGLCTGFVPMYIGEISPTALRGAFGTLNQLGIVVGILVAQIFGLEFIL-G-------S-------EELWPLLLGFTILPAILQSAALPFCPESPRFLLINRK-EE-ENAKQILQRLWGTQDVSQDI---Q---EMKDESARMSQEKQVTVLELFRV-SSYRQPIIIS-IVLQLSQQLSGINAVFYYSTGIFKD--AGVQEPIYATI---GAGVVNTIFTVVSLFLVERAGRRTLHMIGLGGMAFCSTLMTVSLLLKDNYNGMSFVC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


Add PDB User Result:

(2 SA) .........10........20........30........40........50........60........70........80........90........100.......110.......120.......130.......140.......150.......160.......170.......180.......190.......200.......210.......220.......230.......240.......250.......260.......270.......280.......290.......300.......310.......320.......330.......340.......350.......360.......370.......380.......390.......400.......410.......420.......430.......440.......450.......460.......470.......480.......490.......500.......510.......520.......530.......540.......550.......560.......570.......580.......590.......600.......610.....
(Atome) (Ident) (Tito) (Num) (QMean) (Ligand) (Uniprot) MVPVENTEGPSLLNQKGTAVETEGSGSRHPPWARGCGMFTFLSSVTAAVSGLLVGYELGIISGALLQIKTLLALSCHEQEMVVSSLVIGALLASLTGGVLIDRYGRRTAIILSSCLLGLGSLVLILSLSYTVLIVGRIAIGVSISLSSIATCVYIAEIAPQHRRGLLVSLNELMIVIGILSAYISNYAFANVFHGWKYMFGLVIPLGVLQAIAMYFLPPSPRFLVMKGQEGAASKVLGRLRALSDTTEELTVIKSSLKDEYQYSFWDLFRSKDNMRTRIMIGLTLVFFVQITGQPNILFYASTVLKSVGFQSNEAASLASTGVGVVKVISTIPATLLVDHVGSKTFLCIGSSVMAASLVTMGIVNLNIHMNFTHICRSHNSINQSLDESVIYGPGNLSTNNNTLRDHFKGISSHSRSSLMPLRNDVDKRGETTSASLLNAGLSHTEYQIVTDPGDVPAFLKWLSLASLLVYVAAFSIGLGPMPWLVLSEIFPGGIRGRAMALTSSMNWGINLLISLTFLTVTDLIGLPWVCFIYTIMSLASLLFVVMFIPETKGCSLEQISMELAKVNYVKNNICFMSHHQEELVPKQPQKRKPQEQLLECNKLCGRGQSRQLSPET
55 -100%-144 - C5 - - U055 - A:[31-569] ------------------------------PWARGCGMFTFLSSVTAAVSGLLVGYELGIISGALLQIKTLLALSCHEQEMVVSSLVIGALLASLTGGVLIDRYGRRTAIILSSCLLGLGSLVLILSLSYTVLIVGRIAIGVSISLSSIATCVYIAEIAPQHRRGLLVSLNELMIVIGILSAYISNYAFANVFHGWKYMFGLVIPLGVLQAIAMYFLPPSPRFLVMKGQEGAASKVLGRLRALSDTTEELTVIKSSLKDEYQYSFWDLFRSK-NMRTRIMIGLTLVFFVQITGQPNILFYASTVLKSVGFQ---AASLASTGVGVVKVISTIPATLLVDHVGSKTFLCIGSSVMAASLVTMGIVNLNIHM--------------------------------------------------------------------------------------PAFLKWLSLASLLVYVAAFSIGLGPMPWLVLSEIFPGGIRGRAMALTSSMNWGINLLISLTFLTVTDLIG-PWVCFIYTIMSLASLLFVVMFIPETKGCSLEQISMELAKVNY------------------------------------------------
56 -100%-160 - C5 - - U056 - A:[37-552] ------------------------------------GMFTFLSSVTAAVSGLLVGYELGIISGALLQIKTLLALSCHEQEMVVSSLVIGALLASLTGGVLIDRYGRRTAIILSSCLLGLGSLVLILSLSYTVLIVGRIAIGVSISLSSIATCVYIAEIAPQHRRGLLVSLNELMIVIGILSAYISNYAFANVFHGWKYMFGLVIPLGVLQAIAMYFLPPSPRFLVMKGQEGAASKVLGRLRALSDTTEELTVIKSSLKDEYQYSFWDLFRSK-NMRTRIMIGLTLVFFVQITGQPNILFYASTVLKSVGFQ---AASLASTGVGVVKVISTIPATLLVDHVGSKTFLCIGSSVMAASLVTMGIVNLNIHM--------------------------------------------------------------------------------------PAFLKWLSLASLLVYVAAFSIGLGPMPWLVLSEIFPGGIRGRAMALTSSMNWGINLLISLTFLTVTDLIG-PWVCFIYTIMSLASLLFVVMFIPET-----------------------------------------------------------------