@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : LinJ_36_4780: (2018-03-13 )
MNPATQDAAAAEEESPVVCTAKKYIFDLHSYAWKESDCLIRIPRPHKGMGHGGMRVCYAVEDVDEEGAGTPMVAKMFRRNISDVVEKDYFNEGAAQCMCEEFANNFNRIHLTNIHKPNISFLQCYVVRIPRDSIPVASQKKRTGFFSYKTQDTGEVMFVMEPMLSGKFTKYNSNYGETYREDKKAALTSSEAKRRTEVFEAAEAFSHFTLVESGGSMLVCDLQGVNDFLTDPQIHTEDGKGLGMGNMGQEGIDKWIEKHECNEICRALGLQPLLGAVPSSTACAKEENLNLGLRAQLQSQNPVRLRDLVPLTKPLEEMTEAERIEYALKVSRLTD

Atome Classification :

(20 SA) ----------------------.........10......--------------..20----........30........40........50----.........60....--------------------------------..----..70......--..80..---------...---------..-----.90...---.....------100.......110.....--..120.......130.------......140.......150-----.......160.......170.......180.......190.......200.......210..-.....220.....----..230....-----...-----240.....--....250.......260.......270.......280.......290.......300.......310.......--320.......330...----
(Atome) (Ident) (Tito) (Num) (QMean) (Ligand) (Uniprot) ----------------------MNPATQDAAAAEEESPV--------------VCTA----KKYIFDLHSYAWKESDCLIRIPRPHKGMG-----HGGMRVCYAVEDVDE--------------------------------EG----AGTPMVAKMF--RRNISD---------VVE---------KD-----YFNEGA---AQCMC------EEFANNFNRIHLTNIHKP--NISFLQCYVVRIPRDS------IPVASQKKRTGFFSYKTQD-----TGEVMFVMEPMLSGKFTKYNSNYGETYREDKKAALTSSEAKRRTEVFEAAEAFSHFTLVESG-GSMLVCDLQGVND----FLTDPQIHT-----EDG-----K--GLGMG--NMGQEGIDKWIEKHECNEICRALGLQPLLGAVPSSTACAKEENLNLGLRAQLQSQNPVRLRDLVPLTKPLEEMT--EAERIEYALKVSRLTD----
18 HHSearch 77.6234% 15 - C3 - - 3LKM A:[22-273] --------------------------------------T--------------GEMG----ILWEFDPIINKWIRLS--MKLKVERKPFA-----EGALREAYHTVSLGVGTDENYPLGKLFPPIEMISPISKNNEAMTQ--LK----NGTKFVLKLY--KKE--QQ--------ASR---------EL-----YFEDVK---MQMVC------RDWGNKFNQKKPP----K--KIEFLMSWVVELIDRS------PSS---------------N-----GQPILCSIEPLLVGEFKKNNSNYGAVLTN-----------------RSTPQAFSHFTYELSN-KQMIVVDIQGVDD----LYTDPQIHT-----PDG-----K--GFGLG--NLGKAGINKFITTHKCNAVCALLDLDV---------------------------------------------------------------------
19 HHSearch 77.6133% 20 - C3 - - 3PDT A:[22-273] --------------------------------------T--------------GEMG----ILWEFDPIINKWIRLS--MKLKVERKPFA-----EGALREAYHTVSLGVGTDENYPLGTTKLFPPIEMISPISKNNEAMTQLK----NGTKFVLKLY--KKE--QQ--------ASR---------EL-----YFEDVK---MQMVC------RDWGNKFNQKKPP----K--KIEFLMSWVVELIDRS------PS---------------SN-----GQPILCSIEPLLVGEFKKNNSNYGAVLTN-----------------RSTPQAFSHFTYELSN-KQMIVVDIQGVDD----LYTDPQIHT-----PDG-----K--GFGLG--NLGKAGINKFITTHKCNAVCALLDLDV---------------------------------------------------------------------
20 HHSearch 73.7625% 1 * C3 * - 1IAH B:[18-277] ------------------------QSIPFVPVPPRGEPV--------------TVYRLEESSPSILNNSMSSWSQLGLCAKIEFLSKEEM-----GGGLRRAVKVLCTWSEHDI----------------------------LK----SGHLYIIKSF--LPEVIN---------TWSSIYKEDTVLHL-----CLREIQ---QQRAA------QKLTFAFNQMKPKSI-PY--SPRFLEVFLLYCH---------------------------------SAGQWFAVEECMTGEFRKYNNNNGDEIIPT-------------NTLEEIMLAFSHWTYEYTR-GELLVLDLQGVGE----NLTDPSVIK-----AEEKRSCDM--VFGPA--NLGEDAIKNFRAKHHCNSCCRKLKLPDLKRN-----------------------------------------------------------------
6 PsiBlast_PDB 69.4534% 8 - C3 - - 4ZME MHCKA_DICDI A:[105-281] -----------------------------------------------------------------------------------------------------------------------------------------------------GTKFVLKLY--KK---Q---------QAS---------REL----YFEDVK---MQMVC------RDWGNKFNQ------KKPPKKIEFLMSWVVEL-IDR------SPSSNGQ-------------------PILCSIEPLLVGEFKKNNSNYG--------AVLTN----RST-----PQAFSHFTYELSN-KQMIVVDIQGVDD----LYT-PQIHT-----PDG-----K--GFGLG--NLGKAGINKFITTHKCNAVCALLDLDVKLGGVLSG-------------------------------------------------------------
3 PsiBlast_PDB 69.3534% 14 - C3 - - 5E9E MHCKA_DICDI A:[105-276] -----------------------------------------------------------------------------------------------------------------------------------------------------GTKFVLKLY--KKE--Q---------QAS---------REL----YFEDVK---MQMVC------RDWGNKFNQ------KKPPKKIEFLMSWVVEL-IDR------SPSSNGQ-------------------PILCSIEPLLVGEFKKNNSNYG--------AVLTN----RST-----PQAFSHFTYELSN-KQMIVVDIQGVDD----LYTDPQIHT-----PDG-----K--GFGLG--NLGKAGINKFITTHKCNAVCALLDLDVKLG------------------------------------------------------------------
29 Fugue 69.0025% 8 - C3 - - 1IA9 TRPM7_MOUSE A:[3-280] -------------------YYYSAVERNNLMRLSQSIPFVPVPPRGEPVTVYRLEES----SPSILNNSMSSWSQLGLCAKIEFLS--KM-----GGGLRRAVKVLCTWS--------------------------------EHDILKSGHLYIIKSF--LPEVINTWSSIYKEDTVL---------HL-----CLREIQ---QQRAA------QKLTFAFNQMKPKSIPYS---PRFLEVFLLYCH---------------------------------SAGQWFAVEECMTGEFRKYNNNNG-------------DEIIPTNTLEEIMLAFSHWTYEYTR-GELLVLDLQGVGE----NLTDPSVIKAEEKRSCD-----M--VFGPA--NLGEDAIKNFRAKHHCNSCCRKLKLPDLKRNDYT--------------------------------------------------------------
2 PsiBlast_PDB 68.9334% 16 - C3 - - 3LLA MHCKA_DICDI A:[105-275] -----------------------------------------------------------------------------------------------------------------------------------------------------GTKFVLKLY--KKE--Q---------QAS---------REL----YFEDVK---MQMVC------RDWGNKFNQ------KKPPKKIEFLMSWVVEL-IDR------SPSSNGQ-------------------PILCSIEPLLVGEFKKNNSNYG--------AVLTN----RST-----PQAFSHFTYELSN-KQMIVVDIQGVDD----LYTDPQIHT-----PDG-----K--GFGLG--NLGKAGINKFITTHKCNAVCALLDLDVKL-------------------------------------------------------------------
22 HHSearch 68.6127% -26 - C3 - - 4KUJ - ? B:[47-273] ----------------------------------------------------------------------NQFLFQH--STFRVELAPFA-----KGGERLAFRAING----------------------------------------RGDRIVLKRF--FQQRP------------L---------TM-----LLETIE---RQLIC------IYLANIFNKLNVS---PN--KLHFLPNYLFIPSPTK------DL------DGKILTLEQTEQAVAATCRTPNFVEPYLSGYFIKYIDNNGWINES---------------EFHSTLHAFAHWTWVHTK-GALLICDIQGVNANNKFYLTDPALHH-----IDQ-----NKFIYSET--NLGEVGISQFFRTHQCNAICQGLHLPKHKEQVLP--------------------------------------------------------------
21 HHSearch 68.0325% -1 - C3 - - 1IA9 TRPM7_MOUSE A:[18-277] ------------------------QSIPFVPVPPRGEPV--------------TVYRLEESSPSILNNSMSSWSQLGLCAKIEFLSK--M-----GGGLRRAVKVLCTWSEHDI----------------------------LK----SGHLYIIKSF--LPEVIN---------TWSSIYKEDTVLHL-----CLREIQ---QQRAA------QKLTFAFNQMKPKSI-PY--SPRFLEVFLLYCH---------------------------------SAGQWFAVEECMTGEFRKYNNNNGDEIIPT-------------NTLEEIMLAFSHWTYEYTR-GELLVLDLQGVGE----NLTDPSVIK-----AEEKRSCDM--VFGPA--NLGEDAIKNFRAKHHCNSCCRKLKLPDLKRN-----------------------------------------------------------------
5 PsiBlast_PDB 68.0336% 21 - C3 - - 5DYJ MHCKA_DICDI A:[105-275] -----------------------------------------------------------------------------------------------------------------------------------------------------GTKFVLKLY--KKEAEQ---------QAS---------REL----YFEAVK---MQMVC------RDWGNKFNQ------KKPPKKIEFLMSWVVEL-IDR------SPSSNGQ-------------------PILCSIEPLLVGEFKKNNSNYG--------AVLTN----RST-----PQAFSHFTYELSN-KQMIVVDIQGVDD----LYTDPQIHT-----PDG-----K--GFGLG--NLGKAGINKFITTHKCNAVCALLDLDVKL-------------------------------------------------------------------
9 PsiBlast_PDB 67.5934% 11 - C3 - - 4ZS4 MHCKA_DICDI A:[105-273] -----------------------------------------------------------------------------------------------------------------------------------------------------GTKFVLKLY--KKE--Q---------QAS---------REL----YFEDVK---MQMVC------RDWGNKFNQ------KKPPKKIEFLMSWVVEL-IDR------SPSSNGQ-------------------PILCSIEPLLVGEFKKNNSNYG--------AVLTN----RST-----PQAFSHFTYELSN-KQMIVVAIQGVDD----LYTDPQIHT-----PDG-----K--GFGLG--NLGKAGINKFITTHKCNAVCALLDLDV---------------------------------------------------------------------
28 Fugue 67.1529% 64 - C3 - - 3LKM A:[22-273] ---------------TGEMGILWEFDPIINKWIRLSMKL--------------KVER----KPFAEGALREAYHTVSLGVGTDENYPLGKLFPPIEMISPISKNNEAMTQ--------------------------------LK----NGTKFVLKLY--KKE-QQ---------ASR---------EL-----YFEDVK---MQMVC------RDWGNKFNQKKPPK------KIEFLMSWVVELID---------------------RSPSSN-----GQPILCSIEPLLVGEFKKNNSNYGAVLTNR-----------------STPQAFSHFTYELSN-KQMIVVDIQGVDD----LYTDPQIHT-----PDG-----K--GFGLG--NLGKAGINKFITTHKCNAVCALLDLDV---------------------------------------------------------------------
7 PsiBlast_PDB 66.6734% 9 - C3 - - 4ZMF MHCKA_DICDI A:[105-274] -----------------------------------------------------------------------------------------------------------------------------------------------------GTKFVLKLY--KKEA-------------S---------REL----YFEDVK---MQMVC------RDWGNKFNQ------KKPPKKIEFLMSWVVEL-IDR------SPSSNGQ-------------------PILCSIEPLLVGEFKKNNSNYG--------AVLTN----RST-----PQAFSHFTYELSN-KQMIVVDIQGVDD----LYT-PQIHT-----PDG-----K--GFGLG--NLGKAGINKFITTHKCNAVCALLDLDVK--------------------------------------------------------------------
1 PsiBlast_PDB 66.6134% 17 - C3 - - 3LKM A:[105-273] -----------------------------------------------------------------------------------------------------------------------------------------------------GTKFVLKLY--KKE--Q---------QAS---------REL----YFEDVK---MQMVC------RDWGNKFNQ------KKPPKKIEFLMSWVVEL-IDR------SPSSNGQ-------------------PILCSIEPLLVGEFKKNNSNYG--------AVLTN----RST-----PQAFSHFTYELSN-KQMIVVDIQGVDD----LYTDPQIHT-----PDG-----K--GFGLG--NLGKAGINKFITTHKCNAVCALLDLDV---------------------------------------------------------------------
10 PsiBlast_PDB 65.6436% 12 - C3 - - 3PDT A:[105-271] -----------------------------------------------------------------------------------------------------------------------------------------------------GTKFVLKLY--KKE--Q---------QAS---------REL----YFEDVK---MQMVC------RDWGNKFNQ------KKPPKKIEFLMSWVVEL-IDR------SPSSNGQ-------------------PILCSIEPLLVGEFKKNNSNYG--------AVLTN----RST-----PQAFSHFTYELSN-KQMIVVDIQGVDD----LYTDPQIHT-----PDG-----K--GFGLG--NLGKAGINKFITTHKCNAVCALLDL-----------------------------------------------------------------------
4 PsiBlast_PDB 65.0934% 14 - C3 - - 5E4H - MHCKA_DICDI A:[105-275] -----------------------------------------------------------------------------------------------------------------------------------------------------GTKFVLKLY--KK--------------AS---------REL----YFE-VK---MQMVC------RDWGNKFNQ------KKPPKKIEFLMSWVVEL-IDR------SPSSNGQ-------------------PILCSIEPLLVGEFKKNNSNYG--------AVLTN----RST-----PQAFSHFTYELSN-KQMIVVDIQGVDD----LYTDPQIHT-----PDG-----K--GFGLG--NLGKAGINKFITTHKCNAVCALLDLDVKL-------------------------------------------------------------------
12 PsiBlast_PDB 63.5628% -17 - C3 - - 4NL0 ? A:[66-264] ------------------------------------------------------------------------------------------------GGERLAFRAIN------------------------------------G----RGDRIVLKRFFQQRPLTM---------LLE---------TI----------E---RQLIC------IYLANIFNKL---NVSPN--KLHFLPNYLF-IPSPTKDLDGKILTLEQTEQAVAATCRTPN-----------FVEPYLSGYFIKYIDNNGWI---------------NESEFHSTLHAFAHWTWVHTK-GALLICDIQGVNANNKFYLTDPALHH-----IDQ-----N--KFIYSETNLGEVGISQFFRTHQCNAICQGLHL-----------------------------------------------------------------------
11 PsiBlast_PDB 63.3528% -11 - C3 - - 4KUJ ? A:[66-264] ------------------------------------------------------------------------------------------------GGERLAFRAIN------------------------------------G----RGDRIVLKRFFQQRPLTM---------LLE---------TI----------E---RQLIC------IYLANIFNKL---NVSPN--KLHFLPNYLF-IPSPTKDLDGKILTLEQTEQAVAATCRTPN-----------FVEPYLSGYFIKYIDNNGWI---------------NESEFHSTLHAFAHWTWVHTK-GALLICDIQGVNANNKFYLTDPALHH-----IDQ-----N--KFIYSETNLGEVGISQFFRTHQCNAICQGLHL-----------------------------------------------------------------------
8 PsiBlast_PDB 62.5934% 14 - C3 - - 3LMI MHCKA_DICDI A:[105-274] -----------------------------------------------------------------------------------------------------------------------------------------------------GTKFVLKLY--KK-------------QAS---------REL----YFEDVK---MQMVC------RDWGNKFNQ------KKPPKKIEFLMSWVVEL-IDR------SPS-NGQ-------------------PILCSIEPLLVGEFKKNNSNYG--------AVLTN----RST-----PQAFSHFTYELSN-KQMIVVDIQGVDD----LYTAPQIHT-----PDG-----K--GFGLG--NLGKAGINKFITTHKCNAVCALLDLDVK--------------------------------------------------------------------
31 Fugue 45.0317% 17 - C3 - - 4NXT MID51_HUMAN A:[9-345] DLKKSRLRMSLQEKLLTYYRNRAAIPAGEQARAKQAAVD--------------ICAE----LRSFLRAKLPDMPLRDMYLSGSLYDDLQV-----VTADHIQLIVPLVLE--------------------------------QN----LWSCIPGEDT--IMNVPG---------FFL---------VRRENPEYFPRGSSYWDRCVVGGYLSPKTVADTFEKVVAGSINWP--AIGSLLDYVIRPAPPP------------EALTLEVQYERDK-----HLFIDFLPSVTLGDTVLVAKPHRLAQYDNLWRLSLRPAETARLRALDQA----------DSGCRSLCLKILKAICK----STPALGHLT-----ASQ-----L--TNVIL--HLAQEEAD-WS---------PDMLADRFLQALRGLISYLEAGVLPSALN---------------PKVNLFAELTPEEIDELGYTLYCSLSEPEVLL