@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : B0VLD7: (2017-11-01 )
MIMQIRQFQAQRMQAPRDFTPIENTPICVEIGAGKGKHALLFSGQNPQHTLYAIERTREKFLAMQKQHGLEPRDNLIPVHADALPWVVHALYPAQVEHFFILYPNPEPHNPAQRWLNMPFFEFLLSRLKTGGTITLAGNIPEYIEEAEQQLLNVWKLPYQKEKIAQTSARTHFEIKYLERGELCQQLIMTKPEGYNTRFDEFAPLQGQIHVE

Atome Classification :

(20 SA) -------------.........10........20-------..--...------....30........40.-.......50....-------...--.60.-.......70----...----...--..80........90.-.......100.....--...--110.......120.......130..---.....140...-....150...-....160----.--.-----.......---170........180.....-...190.......200.......210----------------------------------------------------------------------------------------------------------------------
(Atome) (Ident) (Tito) (Num) (QMean) (Ligand) (Uniprot) -------------MIMQIRQFQAQRMQAPRDFT--------PI--ENT------PICVEIGAGKGKHALLF-SGQNPQHTLYAIE-------RTR--EKFL-AMQKQHGLE----PRD----NLI--PVHADALPWVVHALY-PAQVEHFF-ILYPNP--EPH--NPAQRWLNMPFFEFLLSRLKTGGTI---TLAGNIPEYIE-EAEQQLLNVW-KLPYQ------K--E-----KIAQTSA---R-THFEIKYLER-GELCQQ-LIMTKPEGYNTRFDEFAPLQGQIHVE----------------------------------------------------------------------------------------------------------------------
34 HHSearch 75.6520% -30 - C3 - - 3DXX TRMB_ECOLI A:[33-210] ---------------------------------------------REA------PVTLEIGFGMGASLVAM-AKDRPEQDFLGIE-------VHS--PGVG-ACLASAHEE----GLS----NLR--VMCHDAVEVLHKMIP-DNSLRMVQ-LFFPDP--WHKARHNKRRIVQVPFAELVKSKLQLGGVF---HMATDWEPYAE-HMLEVMSSID-GYKNL------S--ESNDYVPRPASRP---V-TKFEQRGHRL-GHGVWD-LMFERVK-----------------------------------------------------------------------------------------------------------------------------------------
33 HHSearch 74.9220% -32 - C3 - - 3DXY TRMB_ECOLI A:[33-210] ---------------------------------------------REA------PVTLEIGFGMGASLVAM-AKDRPEQDFLGIE-------VHS--PGVG-ACLASAHEE----GLS----NLR--VMCHDAVEVLHKMIP-DNSLRMVQ-LFFPDP--WHKARHNKRRIVQVPFAELVKSKLQLGGVF---HMATDWEPYAE-HMLEVMSSID-GYKNL------S--ESNDYVPRPASRP---V-TKFEQRGHRL-GHGVWD-LMFERVK-----------------------------------------------------------------------------------------------------------------------------------------
3 PsiBlast_PDB 68.6725% -98 - C3 - - 3DXZ TRMB_ECOLI A:[35-163] -----------------------------------------------A------PVTLEIGFGMGASLVAM-AKDRPEQDFLGIE-------VHS--PGVG-ACLASAHEE----GLS----NLR--VMCHDAVE-VLHKMI-PDNSLRMVQLFFPDPWHKAR--HNKRRIVQVPFAELVKSKLQLGGVF---HMATDWEPYAE--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2 PsiBlast_PDB 68.6425% -99 - C3 - - 3DXY TRMB_ECOLI A:[35-157] -----------------------------------------------A------PVTLEIGFGMGASLVAM-AKDRPEQDFLGIE-------VHS--PGVG-ACLASAHEE----GLS----NLR--VMCHDAVE-VLHKMI-PDNSLRMVQLFFPDPWHKAR--HNKRRIVQVPFAELVKSKLQLGGVF---HMATDWEPYAE--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
1 PsiBlast_PDB 67.9825% -92 - C3 - - 3DXX - TRMB_ECOLI A:[35-157] -----------------------------------------------A------PVTLEIGFGMGASLVAM-AKDRPEQDFLGIE-------VHS--PGVG-ACLASAHEE----GLS----NLR--VMCHDAVE-VLHKMI-PDNSLRMVQLFFPDPWHKAR--HNKRRIVQVPFAELVKSKLQLGGVF---HMATDWEPYAE--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
26 Fugue 67.8314% 2 - C3 - - 2VDV - TRMB_YEAST E:[14-240] -------------NPFSDHQLEYPVSPQDMDWSKLYPYYKNQM--TKK------VTIADIGCGFGGLMIDL-SPAFPEDLILGMEIRVQVTNYVE--DRII-ALRNNTSKH----GFQ----NIN--VLRGNAMKFLPNFFE-KGQLSKMF-FCFPDP--HK------ARIITNTLLSEYAYVLKEGGVV---YTITDVKDLHE-WMVKHLEEHP-LFERL------S--K-----EWEENDE---C-VKIMRNATEE-GKKVER-KKGDKFVACFTRLPTPAIL-----------------------------------------------------------------------------------------------------------------------------
39 HHSearch 66.3416% -32 - C3 - - 1YZH - TRMB_STRPN A:[39-213] ------------------------------------------G--NDN------PIHVEVGSGKGAFVSGM-AKQNPDINYIGID-------IQK--SVLS-YALDKVLEV----GVP----NIK--LLWVDGSDLTD-YFE-DGEIDRLY-LNFSDP--WPKKRHEKRRLTYKTFLDTFKRILPENGEI---HFKTDNRGLFE-YSLVSFSQYG--MKLNGVWLDLH--A-----SDFEGNV---M-TEYEQKFSNK-GQVIYR-VEAE--------------------------------------------------------------------------------------------------------------------------------------------
38 HHSearch 64.5016% -33 - C3 - - 1YZH TRMB_STRPN B:[39-213] ------------------------------------------G--NDN------PIHVEVGSGKGAFVSGM-AKQNPDINYIGID-------IQK--SVLS-YALDKVLEV----GVP----NIK--LLWVDGSDLTD-YFE-DGEIDRLY-LNFSDP--WPKKRHEKRRLTYKTFLDTFKRILPENGEI---HFKTDNRGLFE-YSLVSFSQYG--MKLNGVWLDLH--A-----SDFEGNV---M-TEYEQKFSNK-GQVIYR-VEAE--------------------------------------------------------------------------------------------------------------------------------------------
29 Fugue 63.9020% -28 - C3 - - 4QPP ANM6_HUMAN A:[48-376] YYECYSDVSVHEEMIADRVRTDAYRLGILRNWA--------AL--RG-------KTVLDVGAGTGILSIFC-AQAGAR-RVYAVE-------ASAIWQQAR-EVVRFNGLE----DRV----HVLPGPVETVELPEQVDAIV--SEWMGYG-LLHES--------------MLSSVLHARTKWLKEGGLL----LPASAELFIV-PISDQMLE-W-RLGFW------S--Q-----VKQHYGV---D-MSCLEGFATR-CLMGHS-EIVVQG---LSGEDVLARPQRFAQLELSRAGLEQELEAGVGGRFRCSCYGSAPMHGFAIWFQVTFPGGESEKPLVLSTSPFHPATHWKQALLYLNEPVQVEQDTDVSGEITLLPSRDNPRRLRVLLRYKVGDQEEKTKDFAMED
28 Fugue 63.2718% -40 - C3 - - 5FQN ANM6_MOUSE A:[73-401] -LYYECDVSVHEEMIADQVRTEAYRLGILKNWA--------AL--RG-------KTVLDVGAGTG-ILSIF-CAQAGARRVYAVE-------ASAIWQQAR-EVVRLNGLE----DRV----HVLPGPVETVELPERVDAIV-SEWMGYGL-L---------H--ES----MLSSVLHARTKWLKEGGLLLPASAELFVAPISD-QMLEWRLGFW-SQVKQ------H--Y-----GVDMSCM---E-SFATRCLMGH-SEIVVQDLSGEDVLARPQRFAQLELARAGLEQELEAGVGGRFRCSCYGSAPLHGFAVWFQVTFPGPLVLSTSPLHPATHWKQALLYLNEPVPVEQDTDISGEITLLPSPDNPRRLRILLRYKVGDHEEKTKDFAME---------------
37 HHSearch 63.2318% -15 - C3 - - 2FCA - TRMB_BACSU B:[36-211] ------------------------------------------G--NDN------PIHIEVGTGKGQFISGM-AKQNPDINYIGIE-------LFK--SVIV-TAVQKVKDS----EAQ----NVK--LLNIDADTLT-DVFE-PGEVKRVY-LNFSDP--WPKKRHEKRRLTYSHFLKKYEEVMGKGGSI---HFKTDNRGLFE-YSLKSFSEYG-LLLTY------VSLDLHN--SNLEGNI---M-TEYEEKFSAL-GQPIYR-AEVEW-------------------------------------------------------------------------------------------------------------------------------------------
36 HHSearch 62.2318% -17 - C3 - - 2FCA - TRMB_BACSU A:[37-211] ---------------------------------------------NDN------PIHIEVGTGKGQFISGM-AKQNPDINYIGIE-------LFK--SVIV-TAVQKVKDS----EAQ----NVK--LLNIDADTLT-DVFE-PGEVKRVY-LNFSDP--WPKKRHEKRRLTYSHFLKKYEEVMGKGGSI---HFKTDNRGLFE-YSLKSFSEYG-LLLTY------VSLDLHN--SNLEGNI---M-TEYEEKFSAL-GQPIYR-AEVEW-------------------------------------------------------------------------------------------------------------------------------------------
24 Fugue 61.7714% 38 - C3 - - 1YZH - TRMB_STRPN A:[11-214] --------GATELLEANPQYVVLNPLEAKAKWR--------DLFGNDN------PIHVEVGSGKG-AFVSGMAKQNPDINYIGID-------IQK--SVLS-YALDKVLEV----GVP----NIK--LLWVDGSD-LTDYFE-DGEIDRLY-LNFSDPWPKKR--HEKRRLTYKTFLDTFKRILPENGEI---HFKTDNRGLFE-YSLVSFSQYGMKLNGV------W--L-----DLHASDFEGNVMTEYEQKFSNK-GQVIYR-VEAEF-------------------------------------------------------------------------------------------------------------------------------------------
56 HHSearch 58.9719%-111 - C3 - - 3MGG - ? A:[34-140] ---------------------------------------------PPG------AKVLEAGCGIGAQTVIL-AKNNPDAEITSID-------ISP--ESLE-KARENTEKN----GIK----NVK--FLQANIFSLP---FE-DSSFDHIF-VCFVLE--HLQ--S------PEEALKSLKKVLKPGGTI---TVIE---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
27 Fugue 54.7315% -89 - C3 - - 3HM2 - ? B:[6-178] -------------GQLTKQHVRALAISALA------------P--KPH------ETLWDIGGGSGSIAIEW-LRSTPQTTAVCFE-------ISE--ERRE-RILSNAINL----GVS----DRI--AVQQGAPRAFDD--V-PDNPDVIF-IGLTAP--G--------------VFAAAWKRLPVGGRL---VANAVTVESEQMLWA--------LRKQF------G--G-----TISSFAI---S-HEHTVGSFITMKPALPV-HQWTVVKA----------------------------------------------------------------------------------------------------------------------------------------
42 HHSearch 51.9417%-129 - C3 - - 1XXL - YCGJ_BACSU A:[16-123] -------------------------------TA--------EC--RAE------HRVLDIGAGAGHTALAF-SPYV--QECIGVD-------ATK--EMVE-VASSFAQEK----GVE----NVR--FQQGTAESLP---FP-DDSFDIIT-CRYAAH--HFS--------DVRKAVREVARVLKQDGRF---LLV----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
43 HHSearch 50.1217%-128 - C3 - - 2GLU - YCGJ_BACSU B:[16-123] -------------------------------TA--------EC--RAE------HRVLDIGAGAGHTALAF-SPYV--QECIGVD-------ATK--EMVE-VASSFAQEK----GVE----NVR--FQQGTAESLP---FP-DDSFDIIT-CRYAAH--HFS--------DVRKAVREVARVLKQDGRF---LLV----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
45 HHSearch 49.5412% -61 - C3 - - 5BW4 - ? B:[46-164] ---------------------------------------------SAE------RILVDVGTGDARTAYRQ-AIAHPEWLVVGVD-------PAW--QRMT-ETAVRAARKPAKGGAP----NLV--LVSSAIETVP---AALHGVADEVM-VLMPWG--KLL--RGV-VLGEADVLSGLRAVAKPGAPL---EISIGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
25 Fugue 49.5311% -41 - C3 - - 3P2E NPMA_ECOLX A:[2-216] -------------LILKGTKTVDLSKDELTEII--------G---QFD------RVHIDLGTGDGRNIYKL-AINDQNTFYIGID-------PVK--ENLF-DISKKIIKK----PSKGGLSNVV--FVIAAAES--LPFEL-KNIADSIS-ILFPWG---TL--LEYVIKPNRDILSNVADLAKKEAHF---EFVTTYSDLSK-AYFLSEQYKA-ELSNS------G--F-----RIDDVKE---L-DNEYVKQF-N-SLWAKR-LAFGRKR-------SFFRVSGHV-------------------------------------------------------------------------------------------------------------------------
4 PsiBlast_PDB 48.2827% 46 - C3 - - 2FCA - TRMB_BACSU A:[21-121] -------------------------ISNPADYK--------GK--WNTVFGNDNPIHIEVGTGKGQFISGM-AKQNPDINYIGIE-------LFK--SVIVTAVQKVKDSE----AQNV---KLL--NIDADTLTDVFE----PGEVKRVY-LNFSDP--WP--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------