@TOME V2.3
(Mar 2018)
Ref.
-
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Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
Show Ligands of Templates
Complexes Affinity Score
Main Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Complexes Tab
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : B0VLI9: (2017-11-02 )
MKKPVPKIYRTTNWSSYNQALIKRGNISIWFDPKTQWYAQPQGKHGRNQTYSDAAIQWCLMIKSLFRLSLRMVTGFAQSLIKLCGLNWTAPDYSTLCRRQKRIDIAISYQQSRDGLHLLVDSTGLKFLGEGEWKRKKHQPAYRRQWRKLHIGIDAKTLQIRAVQLTTNNVSDSQVLGDLLDQIPLDERIDSVYTEGAYDTKHCRQVILDRDAHAVIPPRKNAKPWKDKKLRSLERNELLKTVKRLGRSLWKKWSGYHRRSLVETKMHCIK
Atome Classification :
(20 SA)
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------.....------....----10...---.....20----.------.....---...30.--...-----....40..---.....----------------.-50..-------.--...---..------------60-------..---...-..------..70--------.....---------------------.-----------..80...-.----------------------.-.--..90...-------..-----------...100-----------....--..----.110.-------.--------------------------.-----------..--..120..-----..---.-----.-.-----130--...-.-....140---..---.......150.----.---.--.-----...160.......170.....-...180..-.-....190...--.-..----.200....---------------..-.210...---------------.--...---------------220-.-......-.230-------------....-----...240----...--...--------..250..------------....-..260.......270---------------------------------------------------------------------
(Atome)
(Ident)
(Tito)
(Num)
(QMean)
(Ligand)
(Uniprot)
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MKKPV------PK
I
Y
----RTTNW---S
S
Y
N
Q
A
-----
L
------
I
KRG
N
---
I
S
I
W
FD--PKT-----
Q
W
Y
AQPQG---KHGRN----------------Q-T
Y
S
D
-------
A
--
A
I
Q
---
W
C
------------
L
--------
M
I
---
K
S
L
-
F
R
------
L
S
L
R
--------
M
V
T
G
F
---------------------
A
-----------
Q
S
L
I
K
L
C-G----------------------L-N--WTAP
D
Y
S
-------
T
L
-----------
C
R
RQ
K
R
-----------
I
D
I
A
--
I
S
----
Y
QQSR-------D--------------------------
G
-----------
L
H
--
L
L
VDSTG-----
L
K
---
F
-----L-G-----EG---EWK-R-KKHQ
P
-----
A
Y
---
R
R
Q
W
R
K
L
H
I
G
I
----
D
---
A
--
K
-----
T
L
Q
I
R
A
V
Q
L
TTNNV
S
-
D
S
Q
V
L
-
G
D
L
L
D
QIP-
L
-
D
E
R
I
D
S
V
Y
TE--G-AY----
D
T
K
H
C
R
Q
V
---------------
I
L-DRDAHAV---------------I--PPR---------------KN--A-KPW
K
D
K
-
K
L
R
S
-------------
L
E
R
N
-----
E
L
L
K
T
-----
V
K
R
--
L
G
R
--------
S
L
W
-
K
KW------------SGY
H
-
R
R
S
L
V
E
T
K
M
HCIK-----------------------------------------------------------------------
30
Fugue
64.31
22%
3
- C2 -
-
4QNU
1
CMOB_ECOLI
A:
[1-323]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
I
D
F
---
G
N
F
Y
S
------
L
------
I
A
K
N
H
---
L
S
H
W
L
E
T
L
P
A
Q
-----
I
A
N
W
Q
R
E
Q
---
Q
H
G
L
F
----------------
K
-
Q
W
S
N
-------
A
--
V
E
F
---
L
P
EIKPYRLDLLHS
V
--------
T
A
---
E
S
E
-
E
P
------
L
S
A
G
--------
Q
I
K
R
I
---------------------
E
-----------
T
L
M
R
N
L
-------------------------
M
-
P
--
W
R
K
G
P
F
S
L
YGVNID
T
E
-----------
W
R
S
D
W
K
-----------
W
D
R
V
--
L
P
----
H
L
S
D
L
-------
T
--------------------------
G
-----------
R
T
--
I
L
D
V
G
C
G
SG
Y
H
M
W
R
---
M
-----
I
-
G
-----
A
G
---
A
-------------------------
H
L
A
V
G
I
----
D
PT
Q
L
--
F
-----
L
C
Q
F
E
A
V
R
K
L
L
G
N
D
Q
-
R
A
H
L
L
-
P
L
G
I
E
Q
L
P
-
A
-
L
K
A
F
D
T
V
F
S
M
--
G
V
L
Y
HRRS
P
L
E
H
L
W
Q
L
K
D
Q
LVNE
G
E
L
V
L
E
T
L
V
I
-
D
G
D
E
N
T
V
L
V
P
G
DRYAQMRNVYF
I
--
P
S
A
---------------
L
A
--
L
-
K
N
W
L
K
K
C
G
F
V
D
-------------
I
R
I
A
-----
D
V
S
V
T
-----
T
T
E
--
E
Q
R
R
T
EWMVTE
S
L
A
-
D
F
L
------------
D
P
H
D
-
P
G
K
T
V
E
G
Y
P
A
P
K
R
A
V
L
I
A
R
K
P---------------------------------------------------------------
26
Fugue
57.84
19%
5
- C1 -
-
4NWV
-
?
A:
[30-384]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
S
V
A
P
V
------
A
K
A
N
----
A
L
R
T
T
---
S
S
N
S
I
L
-----
L
------
K
G
C
D
R
---
I
V
T
V
V
D
--
A
S
T
YDAGS
A
I
V
S
I
P
I
T
---
P
D
I
A
Y
----------------
R
-
L
G
S
T
-------
A
--
R
T
F
---
Q
R
------------
I
--------
K
Y
---
R
S
L
K
F
R
------
V
N
A
Q
CATTT
A
G
G
Y
V
A
G
F
---------------------
V
KDAADVLPTGT
A
S
I
P
Y
L
M
-
S
----------------------
N
-
T
G
S
F
T
Q
P
W
W
K
-------
S
T
-----------
V
H
N
V
K
I
-----------
P
Q
K
L
--
F
Y
----
T
E
A
P
T
-------
R
--------------------------
G
ADA
V
R
E
Y
C
P
G
Q
F
H
--
V
L
V
D
S
K
P
-----
S
Q
I
C
P
V
-----
T
-
V
-----
D
L
---
E
W
V
-
V
-
E
L
H
D
A
-----
T
F
---
R
K
E
S
D
Q
T
A
I
S
A
----
I
---
V
AD
H
-----
T
L
N
V
Y
G
L
P
A
T
S
N
R
V
G
-
H
I
L
I
S
-
P
I
G
Q
T
P
K
D
-
L
-
T
P
T
R
F
A
T
F
F
G
--
F
-
L
P
----
D
D
K
F
C
--
V
---------------
R
I
-
P
T
P
V
D
V
V
---------------
L
--
T
G
D
---------------
N
V
--
Y
-
Q
S
V
E
A
T
-
H
I
R
A
Y
L
V
N
GGL
G
I
D
F
H
L
A
A
Y
N
-----
D
T
T
H
T
-----
I
Q
P
--
I
I
P
--------
T
L
W
-
N
V
Y
D
V----------
T
G
A
V
-
T
A
P
F
T
S
A
I
Y
D
N
H
V
W
T
HK
D
K
F
V
P
V
S
FQDEPIP
G
T
V
F
D
Y
L
Y
PRS------------------------------------------
25
Fugue
52.46
17%
12
- C2 -
-
1YT3
-
RND_ECOLI
A:
[1-375]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------M
N
Y
Q
M
I
TT
D
D
A
L
A
S
L
C
E
A
V
R
A
F
------
P
A
I
A
----
L
D
T
E
F
---
V
R
T
R
T
Y
-----
Y
------
P
Q
L
G
L
---
I
Q
L
-
F
D
--
G
E
H
-----
L
A
L
I
D
P
L
G
ITD
W
S
P
L
K
----------------
A
-
I
L
R
D
-------
P
--
S
I
T
---
K
F
------------
L
H
AG
S
E
D
L
E
V
F
---
L
N
V
-
F
G
ELPQP
L
I
D
T
Q
--------
I
L
A
A
F
---------------------
C
GRPMSWG
F
---
A
S
M
V
E
E
Y
-
S
G
V
T
L
D
KSESRTDWLARPLT
E
R
Q
C
-
E
--
Y
A
A
A
D
V
W
-------
Y
L
-----------
L
P
I
T
A
K
-----------
L
M
V
E
--
T
E
A
S
GW
L
P
A
A
L
-------
D
--------------------------
E
-----------
C
R
--
L
M
Q
M
R
R
Q
-----
E
V
---
V
-----
A
-
P
-----
E
D
---
A
W
R
-
D
-
I
T
N
A
W
-----
Q
L
R--
T
R
Q
L
A
C
L
Q
L
L
A
----
D
---
W
--
R
-----
L
R
K
A
R
E
R
D
L
A
V
N
F
V
V
-
R
E
E
H
L
-
W
S
V
A
R
Y
M
P
-
G
S
L
G
E
L
D
S
L
G
L
S
--
G
-
S
E
----
I
R
F
H
G
K
T
L
---------------
L
A
-
L
V
E
K
A
Q
T
---------------
L
--
P
E
D
ALPQPMLNLMDMPG
Y
R
K
--
A
-
F
K
A
I
K
S
-
L
I
T
D
-------------
V
S
E
T
H
KISA
E
L
L
A
S
-----
R
R
Q
--
I
N
Q
--------
L
L
N
-
W
H
W
KLKPQNNLPELI
S
G
W
R
-
G
E
L
M
A
E
A
L
H
N
L
L
Q
EYPQ-------------------------------------------------------------------
23
Fugue
52.08
16%
36
- C2 -
-
4IIK
3
SIDD_LEGPH
A:
[1-314]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
R
S
I
I
------
T
Q
I
C
NGVL
H
G
Q
S
Y
---
Q
S
G
S
N
D
-----
L
------
D
K
-
G
N
---
S
E
I
F
A
S
--
S
L
------
F
V
H
L
N
E
Q
G
---
K
E
I
K
D
SD
D
K
I
V
I
G
Y
T
KDG
M
A
F
Q
-
I
V
V
D
-------
G
FY
G
C
E
---
R
Q
------------
A
--------
V
F
---
S
F
I
-
D
N
------
Y
V
L
P
--------
L
I
D
N
F
---------------------
S
-----------
L
D
L
T
R
Y
P
D
S
----------------------
K
-
K
--
V
T
E
S
L
I
H
-------
T
I
-----------
Y
S
L
R
S
K
HAPLA
E
F
T
---
M
S
L
C
--
V
T
----
Y
Q
K
D
E
-------
Q
--------------------------
L
-----------
F
C
A
G
F
G
I
G
D
T
G
-----
I
A
---
I
-----
K
R
N
-----
E
G
---
T
------
I
E
Q
L
-----
V
C
---
H
T
E
V
D
G
F
K
D
A
F
----
D
---
N
--
Y
-----
S
S
A
N
I
D
L
V
I
E
R
N
S
V
F
-
N
T
K
V
M
P
G
D
E
L
V
G
Y
T
Y
V
-
P
P
M
L
E
M
T
E
K
E
--
F
-
E
V
----
E
K
R
I
V
R
H
L
---------------
N
L
-
D
P
G
N
F
D
D
---------------
K
--
D
P
L
---------------
F
S
Q
L
L
-
Q
V
V
K
S
K
-
Q
K
Q
L
-------------
V
E
Q
A
-----
K
E
T
G
Q
-----
I
Q
R
--
F
G
D
--------
D
F
T
V
G
R
L
------------
V
I
P
D
-
Q
L
L
I
N
Q
L
R
I
H
A
L
S
-----------------------------------------------------------------------
24
Fugue
48.25
20%
22
- C3 -
-
5GNG
-
Y1552_HAEIN
A:
[1-214]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
K
T
K
F
Y
D
YQGE
H
L
I
L
----
Y
F
A
G
W
---
G
T
P
P
D
A
VNH
L
I
L
------
P
E
N
H
D
---
L
L
I
C
Y
D
------------
Y
Q
D
L
N
L
---
D
F
D
L
S
----------------
A
-
Y
R
H
I
-------
R
--
L
V
A
---
W
S
------------
M
---------------
G
-
V
W
------
V
A
E
R
--------
V
L
Q
G
I
----------------------------------
R
L
K
S
A
T
-
A
----------------------
V
-
N
--
G
T
G
L
P
C
D
-------
D
------------------------------
S
F
G
--
I
P
----
Y
A
I
F
K
-------
G
--------------------------
T
-----------
L
E
--
N
L
T
E
N
T
R
-----
L
K
---
F
-----
E
-
R
-----
R
I
C
GD
K
A
S
-
F
-
E
R
Y
Q
L
-----
F
P
---
A
R
P
F
D
E
I
H
Q
E
L
----
T
---
A
--
L
-----
F
A
M
I
Q
Q
---------------------------
D
K
R
I
D
L
I
----------------
H
W
A
N
A
---------------
W
V
S
S
R
D
K
--
I
---------------
F
--
T
P
A
---------------
N
Q
--
H
-
Q
Y
W
A
L
R
-
C
A
V
Q
-------------
E
I
E
G
-----
E
H
Y
-
V
-----
F
S
R
---------------
F
-
T
H
W
------------
S
A
L
W
-
D
-----------------------------------------------------------------------------------
22
Fugue
42.20
19%
-10
- C3 -
-
5T6O
-
PHAC_CUPNH
A:
[1-389]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SAFEVGRNVAVTEGAVVFENEY
F
Q
L
L
Q
Y
K
P
LTDKVHA
R
P
L
L
M
V
P
P
C
------
I
N
K
Y
----
Y
I
L
D
L
QPE
S
S
L
V
R
H
-----
V
------
V
E
Q
G
H
T
V
F
L
V
S
W
R
N
--
P
D
A
-----
S
M
A
G
S
T
--------
W
D
----------------
D
-
Y
I
E
H
-------
A
--
A
I
R
---
A
I
------------
E
--------
V
A
---
R
D
I
-
S
G
------
Q
D
K
I
--------
N
V
L
G
F
A
V
G
G
T
I
V
S
T
A
L
A
V
L
A
A
R
GEHP
A
-----------
A
S
V
T
L
L
T
-
T
----------------------
L
L
D
--
F
A
D
T
G
I
L
-------
D
V
FVDEGHVQGAP
C
A
L
L
R
G
-----------
L
E
L
A
N
T
F
S
----
F
L
R
P
N
-------
D
--------------------------
L
-----------
V
W
--
N
Y
V
V
D
N
Y
-----
L
K
---
G
NTPVP
F
-
D
-----
L
L
---
F
W
N
-
G
D
A
T
N
L
P
-----
G
P
---
W
Y
C
W
Y
L
R
H
T
Y
L
----
Q
---
N
--
E
LKVPG
K
L
T
V
C
G
V
P
V
D
L
A
S
I
D
V
P
T
Y
I
Y
-
G
S
R
E
D
H
I
V
-----
P
W
T
A
A
Y
A
S
--
T
-
A
L
----
L
A
N
K
L
R
F
V
---------------
L
G
-
A
S
G
H
I
A
G
---------------
V
I
N
P
P
A
---------------
K
N
--
K
R
S
H
W
T
N
D
-
A
L
P
E
-------------
S
P
Q
Q
-----
W
L
A
G
A
-----
I
E
H
--
H
G
---------
S
W
W
-
P
D
W
------------
T
A
W
L
-
A
G
Q
A
G
A
K
R
A
A
P
A
N
YGNARYRAIEPAPGRYVKAKA--------------------------------------------------
1
PsiBlast_PDB
41.38
23%
-25
- C4 -
-
2HDW
-
Y2218_PSEAE
A:
[116-255]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Y
A
Q
T
-----
M
------
A
E
R
G
F
---
V
T
L
A
F
D
--
P
S
--------
Y
T
G
E
S
G
---
G
Q
P
R
N
----------------
V
-
A
S
P
D
I
N
T
E
D
F
S
A
--
A
V
D
---
F
I
------------
S
--------
L
L
---
P
E
V
-
N
R
------
E
R
I
------------------------------------------------
G
V
I
G
I
C
-
G
----------------------
W
-
G
--
G
M
A
L
N
A
V
-------
A
V
-----------
D
K
R
V
K
A
-----------
V
V
T
S
--
T
M
----
Y
D
M
T
R
V
M
S
KGYN
D
--------------------------
S
-----------
V
T
--
L
E
Q
R
T
R
T
-----
L
E
---
Q
-----
L
-
G
-----
Q
Q
---
R
W
K
D
A
-
E
S
G
T
P
-----
A
Y
---
Q
P
P
Y
N
E
L
K
G
G
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
21
Fugue
40.73
20%
30
- C2 -
-
4X0Q
6
DPOLQ_HUMAN
A:
[6-772]
S
L
S
I
I
DVASDQ
N
L
F
Q
T
F
I
K
E
W
R
C
KK
R
F
S
I
S
L
A
C
E
K
I
RDDTLVV
G
L
A
V
C
WGGR
D
A
Y
Y
F
S
LL
D
P
S
L
T
LK
D
R
M
W
Y
L
Q
S
C
L
RKESD
K
E
C
S
V
V
I
YDF
I
Q
S
Y
K
I
L
L
LSCGISLE
Q
S
Y
E
D
P
K
V
A
C
W
L
L
DPDSQEPT
L
H
S
I
V
T
S
FLPHELPLLEGMETSQGIQSLGLNAGSEHSGR
Y
R
A
S
V
E
S
I
L
I
F
N
S
M
N
Q
L
N
S
L
L
Q
K
E
NLQDVFRKV
E
M
P
S
Q
Y
C
L
A
L
L
E
L
N
G
I
G
F
S
T
A
E
C
E
S
Q
K
H
I
M
Q
A
K
L
D
A
I
E
T
Q
A
Y
Q
LAGHSFSFTS
S
D
D
I
A
E
VLFLE
L
K
L
P
PQFSTS
K
D
V
L
N
K
L
K
A
L
H
------
P
L
P
G
----
L
I
L
E
W
---
R
R
I
T
N
A
-----
I
T
KV
V
F
P
L
Q
R
E
K
---
C
L
N
P
F
L
--
G
M
E
-----
R
I
Y
P
V
S
Q
S
---
H
T
A
T
G
----------------
R
I
T
F
T
E
-------
P
--
N
I
Q
NVP
R
D
------------
F
--------
E
I
---
K
M
G
-
M
P
------
F
S
I
S
--------
M
-------------------------
R
-----------
H
A
F
V
P
F
P
-
G
----------------------
G
-
S
--
I
L
A
A
D
Y
S
-------------------------
Q
-----------
L
E
L
R
--
I
L
----
A
H
L
S
H
-------
D
--------------------------
R
-----------
R
L
--
I
Q
V
L
N
T
G
-----
A
D
---
V
-----
F
-
R
-----
S
I
---
A
A
E
-
W
-
K
M
I
E
P
ESVG
D
D
L
---
R
Q
Q
A
K
Q
I
C
Y
G
I
I
Y
GM
G
---
A
--
K
-----
S
L
G
E
Q
M
------
G
I
K
-
E
N
D
A
A
-
C
Y
I
D
S
F
K
S
-
R
-
Y
T
G
I
N
Q
F
M
T
E
--
T
-
V
K
----
N
C
K
R
D
G
F
V
---------------
Q
T
-
I
L
G
R
R
R
Y
---------------
L
--
P
G
I
---------------
K
D
--
N
-
N
P
Y
R
K
A
-
H
A
E
R
-------------
Q
A
I
N
-----
T
I
V
Q
G
S
A
A
D
I
V
K
I
--
A
T
V
--------
N
I
Q
-
K
Q
L
------------
E
T
F
H
-
S
----
T
F
K
S
H
G
H
R
E
G
M
L
Q
S
DC
P
I
R
G
G
F
F
I
LQLHD
E
L
L
Y
E
V
A
EED
V
V
Q
V
A
Q
I
V
K
N
E
M
E
S
AVKLS
V
K
L
K
V
K
V
K
I
G
A
S
W
G
E
L
K
D
F
D
V
27
Fugue
40.04
15%
-73
- C2 -
-
5AF3
1
VPB45_MYCTU
A:
[11-238]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
L
R
F
D
------
V
P
L
Y
----
T
L
A
E
A
---
S
R
Y
L
V
-------------
V
P
R
A
T
---
L
A
T
W
A
D
--
Q
P
I
-------
I
T
A
L
P
H
---
P
T
G
S
H
----------------
A
-
R
L
P
F
-------
V
--
G
I
A
---
E
A
------------
Y
--------
V
L
---
N
A
F
-
R
R
------
A
G
V
P
--------
M
--------------------------------------------------------------------------------------------------------
Q
R
-----------
I
R
P
S
--
L
D
----
W
L
I
K
N
-------
V
--------------------------
G
-----------
P
H
--
A
L
A
S
Q
D
--------------------------------
L
-
C
-
T
D
G
A
E
-----
V
L
---
W
R
F
A
E
R
S
G
E
G
S
----
P
---
D
--
D
-----
L
V
V
R
G
L
I
V
P
R
S
G
Q
Y
V
-
F
K
E
I
V
-
E
H
Y
L
Q
Q
I
S
-
F
-
A
D
--
D
N
L
A
S
M
--
I
-
R
L
----
P
Q
Y
G
D
A
N
V
---------------
V
L
-
D
------------------------
P
R
R
---------------
G
Y
--
G
-
Q
P
V
F
D
G
----
S
-------------
G
V
R
V
-----
A
D
V
L
G
-----
P
L
R
--
A
G
A
--------
T
F
Q
-
A
V
A
------------
D
D
Y
G
V
T
P
D
Q
L
R
D
A
L
D
A
-------------------------------------------------------------------------
28
Fugue
39.62
16%
25
- C2 -
-
1QM4
1
METK1_RAT
A:
[17-396]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G
A
F
M
F
T
S
E
S
V
G
EGH
P
D
K
I
C
D
Q
I
S
D
A
V
L
D
A
H
L
K
Q
DPN
A
K
V
A
C
E
T
V
C
K
TG
M
V
L
L
C
G
E
I
T
S
MAMID
Y
Q
R
V
V
------
R
D
T
I
----
K
H
I
G
Y
---
D
D
-
S
A
K
-----
G
------
F
D
F
K
T
---
C
N
V
L
V
A
--
L
E
Q
-----
Q
---
S
P
--------
E
D
----------------
V
-
G
A
G
D
-------
Q
--
G
L
M
---
F
G
------------
Y
--------
A
T
DET
E
E
C
-
M
P
------
L
T
I
V
--------
L
A
H
K
L
---------------------
N
-----------
T
R
M
A
D
L
R
-
R
S
GV-------------------
L
-
P
--
W
L
R
P
D
S
K
-------
T
Q
-----------
V
T
V
Q
Y
V
Q
D
N
G
A
V
I
P
V
R
V
H
T
I
V
--
I
S
----
V
Q
H
N
E
-------
D
IT
L
E
A
M
R
E
A
L
K
EQVIKAVVPAKYLDE
D
-----------
T
I
--
Y
H
L
Q
P
S
G
-----
R
F
---
V
-----
I
-
G
GPQGD
A
G
---
V
T
G
-
R
-
K
I
I
V
D
-----
T
Y
GGW
G
A
H
G
G
G
A
F
S
G
K
----
D
---
Y
--
T
-----
K
V
D
-
R
S
A
A
Y
A
A
R
W
V
A
-
K
S
L
V
K
-
A
G
L
C
R
R
V
L
-
V
-
Q
V
S
Y
A
I
G
V
A
E
PL
S
-
I
S
----
I
F
T
Y
G
T
S
K
---------------
K
T
-
E
R
E
L
L
E
V
---------------
V
--
N
K
N
---------------
F
D
--
L
-
R
P
G
V
I
V
-
R
D
L
D
-------------
L
K
K
P
-----
I
Y
Q
K
T
-----
A
C
Y
GH
F
G
R
--------
S
E
F
--
P
W
------------
E
V
P
K
-
K
L
V
F
--------------------------------------------------------------------------------
2
PsiBlast_PDB
39.62
38%
-82
- C4 -
-
4A3C
-
RPB1_YEAST
A:
[915-988]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
S
-
G
S
E
I
L
-
G
D
L
K
L
Q
V
L
-
L
-
D
E
E
----
Y
K
Q
--
L
-
V
K
----
D
R
K
F
L
R
E
V
---------------
F
V
-
D
G
E
A
N
W
P
---------------
L
--
P
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
14
PsiBlast_PDB
37.86
38%
-84
- C4 -
-
1I3Q
-
RPB1_YEAST
A:
[915-987]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
S
-
G
S
E
I
L
-
G
D
L
K
L
Q
V
L
-
L
-
D
E
E
----
Y
K
Q
--
L
-
V
K
----
D
R
K
F
L
R
E
V
---------------
F
V
-
D
G
E
A
N
W
P
---------------
L
--
P
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
11
PsiBlast_PDB
37.66
38%
-96
- C4 -
-
4A3G
-
RPB1_YEAST
A:
[915-988]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
S
-
G
S
E
I
L
-
G
D
L
K
L
Q
V
L
-
L
-
D
E
E
----
Y
K
Q
--
L
-
V
K
----
D
R
K
F
L
R
E
V
---------------
F
V
-
D
G
E
A
N
W
P
---------------
L
--
P
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
17
PsiBlast_PDB
37.15
38%
-102
- C4 -
-
1K83
-
RPB1_YEAST
A:
[915-988]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
S
-
G
S
E
I
L
-
G
D
L
K
L
Q
V
L
-
L
-
D
E
E
----
Y
K
Q
--
L
-
V
K
----
D
R
K
F
L
R
E
V
---------------
F
V
-
D
G
E
A
N
W
P
---------------
L
--
P
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
13
PsiBlast_PDB
37.01
38%
-71
- C4 -
-
4A93
-
RPB1_YEAST
A:
[915-988]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
S
-
G
S
E
I
L
-
G
D
L
K
L
Q
V
L
-
L
-
D
E
E
----
Y
K
Q
--
L
-
V
K
----
D
R
K
F
L
R
E
V
---------------
F
V
-
D
G
E
A
N
W
P
---------------
L
--
P
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
9
PsiBlast_PDB
36.93
38%
-103
- C4 -
-
4A3L
-
RPB1_YEAST
A:
[915-985]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
S
-
G
S
E
I
L
-
G
D
L
K
L
Q
V
L
-
L
-
D
E
E
----
Y
K
Q
--
L
-
V
K
----
D
R
K
F
L
R
E
V
---------------
F
V
-
D
G
E
A
N
W
P
---------------
L
--
P
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
7
PsiBlast_PDB
36.93
38%
-81
- C4 -
-
4A3J
-
RPB1_YEAST
A:
[915-985]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
S
-
G
S
E
I
L
-
G
D
L
K
L
Q
V
L
-
L
-
D
E
E
----
Y
K
Q
--
L
-
V
K
----
D
R
K
F
L
R
E
V
---------------
F
V
-
D
G
E
A
N
W
P
---------------
L
--
P
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
29
Fugue
36.46
14%
22
- C2 -
-
3WRY
1
?
A:
[8-431]
-------------------------------------------------------------------------------------------------------------------------------------------------------S
P
R
V
F
C
I
G
TADTK
F
D
E
L
R
F
L
S
E
H
V
R
S
S
L
N
S
F
S
N
KS
S
F
K
V
G
V
T
V
V
D
VSTSWKETNSCADFDFVP
S
K
D
V
L
S
C
HTLGEETMGTFAD
T
R
G
L
A
I
A
I
M
S
K
A
L
E
T
F
L
S
I
A
N
D
E
Q
NLA
G
V
I
G
L
G
G
S
G
G
T
S
L
L
S
S
A
F
R
S
L
P
I
G
I
------
P
K
V
I
----
I
S
T
V
A
---
S
G
Q
T
E
S
-----
Y
------
I
G
T
S
D
---
L
V
L
F
P
S
--
V
V
D
-----
I
C
G
I
N
N
V
S
---
K
V
V
L
S
----------------
N
-
A
G
A
A
-------
F
--
A
G
M
---
V
I
------------
G
--------
R
L
---
E
S
K
-
F
T
------
V
G
V
T
--------
M
F
-
G
V
---------------------
T
-----------
T
P
C
V
N
A
V
-
K
----------------------
E
-
R
--
L
V
K
E
G
Y
E
-------
T
L
-----------
V
F
H
-------------------------------------------------------------------------------------
A
T
G
---------------------------------------
V
-----
G
G
---
R
A
M
E
D
L
V
R
G
G
F
----
I
---
Q
--
G
-----
V
L
D
I
T
T
T
E
V
A
D
Y
V
V
G
-
G
V
M
A
C
-
D
S
S
R
F
D
A
I
-
L
-
E
K
K
I
P
L
V
L
S
V
--
G
-
A
L
----
D
----------------------
M
V
-
N
F
G
P
K
T
T
---------------
I
--
P
P
E
---------------
F
Q
--
Q
-
R
K
I
H
E
H
-
N
-----------------
E
Q
V
-----
S
L
M
R
T
-----
T
V
G
--
E
N
K
--------
K
F
A
-
A
F
I
------------
A
E
K
L
-
N
K
A
S
S
S
V
C
V
C
L
P
E
KGVSALDAPGKDFYD
P
E
A
T
S
C
L
T
R
E
L
Q
M
L
L
E
NNER
C
Q
V
K
V
L
PYHIND
A
E
F
A
N
A
L
V
D
S
F
L
E
I
S
PK-------
15
PsiBlast_PDB
35.95
38%
-85
* C4 *
-
1I50
-
RPB1_YEAST
A:
[915-987]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
S
-
G
S
E
I
L
-
G
D
L
K
L
Q
V
L
-
L
-
D
E
E
----
Y
K
Q
--
L
-
V
K
----
D
R
K
F
L
R
E
V
---------------
F
V
-
D
G
E
A
N
W
P
---------------
L
--
P
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
4
PsiBlast_PDB
35.46
38%
-87
- C4 -
-
4A3D
-
RPB1_YEAST
A:
[915-988]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
S
-
G
S
E
I
L
-
G
D
L
K
L
Q
V
L
-
L
-
D
E
E
----
Y
K
Q
--
L
-
V
K
----
D
R
K
F
L
R
E
V
---------------
F
V
-
D
G
E
A
N
W
P
---------------
L
--
P
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------