@TOME V2.3
(Mar 2018)
Ref.
-
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Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
Show Ligands of Templates
Complexes Affinity Score
Main Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Complexes Tab
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : B0VLT9: (2017-11-04 )
MTILPYALGISLIAITISMLLCLFRMVMGPSIVDRLLALDTLFLNATCLIIVLGIYWTTTSLFEGALLVAMLGFVSTAALARYFTTGHVID
Atome Classification :
(20 SA)
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------.........----10..----.....-------.20..----....------..30........40.-......-------------.50.-----.......60--.....--...70..-......80........90--------------------------
(Atome)
(Ident)
(Tito)
(Num)
(QMean)
(Ligand)
(Uniprot)
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MTIL
P
Y
A
L
G
----
I
S
L
I
----
A
I
T
I
S
-------
M
L
L
C
L
----
F
R
M
V------M
G
P
S
I
V
D
R
L
L
A
L
D
T
L
-
F
LN
A
T
C
-------------
L
I
I
V
-----
L
G
I
Y
WT
T
T
S
--
L
F
E
G
A
--
L
L
V
A
M
L
G
-
F
V
S
T
A
A
L
A
R
Y
FTTGHVID--------------------------
19
HHSearch
57.90
17%
-246
- C5 -
-
4RNG
1
?
F:
[17-87]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
A
----
I
T
T
S
A
-------
L
I
P
Q
A
----
L
K
I
Y
------
K
T
K
S
A
R
D
V
S
L
A
M
F
I
F
-
M
A
I
G
I
T
-------------
L
W
F
F
-----
Y
G
V
L
I
K
E
I
P
--
V
I
L
A
N
--
L
I
S
L
I
L
I
-
F
L
I
I
F
M
K
I
R
Y
----------------------------------
1
PsiBlast_PDB
55.07
29%
-124
- C5 -
-
4D1A
-
HYUP_MICLQ
A:
[96-177]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
P
F
G
I
R
----
G
S
L
I
----
P
I
T
L
K
-------
A
L
L
S
L
F
W
F
G
F
Q
T
W
------
L
G
A
L
A
L
D
E
I
T
R
L
L
T
G
-
F
T
N
L
P
L
-------------
W
I
V
I
-----
F
G
A
I
Q
V
V
T
T
--
F
Y
G
I
T
--
F
I
R
W
M
N
V
-
F
A
S
P
V
L
L
A
------------------------------------
4
PsiBlast_PDB
54.99
29%
-122
- C5 -
-
4D1D
2
HYUP_MICLQ
A:
[96-177]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
P
F
G
I
R
----
G
S
L
I
----
P
I
T
L
K
-------
A
L
L
S
L
F
W
F
G
F
Q
T
W
------
L
G
A
L
A
L
D
E
I
T
R
L
L
T
G
-
F
T
N
L
P
L
-------------
W
I
V
I
-----
F
G
A
I
Q
V
V
T
T
--
F
Y
G
I
T
--
F
I
R
W
M
N
V
-
F
A
S
P
V
L
L
A
------------------------------------
3
PsiBlast_PDB
54.91
29%
-122
- C5 -
-
4D1C
-
HYUP_MICLQ
A:
[96-177]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
P
F
G
I
R
----
G
S
L
I
----
P
I
T
L
K
-------
A
L
L
S
L
F
W
F
G
F
Q
T
W
------
L
G
A
L
A
L
D
E
I
T
R
L
L
T
G
-
F
T
N
L
P
L
-------------
W
I
V
I
-----
F
G
A
I
Q
V
V
T
T
--
F
Y
G
I
T
--
F
I
R
W
M
N
V
-
F
A
S
P
V
L
L
A
------------------------------------
18
HHSearch
54.83
17%
-236
- C5 -
-
4RNG
-
?
D:
[17-87]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
A
----
I
T
T
S
A
-------
L
I
P
Q
A
----
L
K
I
Y
------
K
T
K
S
A
R
D
V
S
L
A
M
F
I
F
-
M
A
I
G
I
T
-------------
L
W
F
F
-----
Y
G
V
L
I
K
E
I
P
--
V
I
L
A
N
--
L
I
S
L
I
L
I
-
F
L
I
I
F
M
K
I
R
Y
----------------------------------
5
PsiBlast_PDB
54.37
29%
-121
- C5 -
-
2JLN
-
HYUP_MICLQ
A:
[96-177]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
P
F
G
I
R
----
G
S
L
I
----
P
I
T
L
K
-------
A
L
L
S
L
F
W
F
G
F
Q
T
W
------
L
G
A
L
A
L
D
E
I
T
R
L
L
T
G
-
F
T
N
L
P
L
-------------
W
I
V
I
-----
F
G
A
I
Q
V
V
T
T
--
F
Y
G
I
T
--
F
I
R
W
M
N
V
-
F
A
S
P
V
L
L
A
------------------------------------
2
PsiBlast_PDB
54.35
29%
-120
- C5 -
-
4D1B
-
HYUP_MICLQ
A:
[96-177]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
P
F
G
I
R
----
G
S
L
I
----
P
I
T
L
K
-------
A
L
L
S
L
F
W
F
G
F
Q
T
W
------
L
G
A
L
A
L
D
E
I
T
R
L
L
T
G
-
F
T
N
L
P
L
-------------
W
I
V
I
-----
F
G
A
I
Q
V
V
T
T
--
F
Y
G
I
T
--
F
I
R
W
M
N
V
-
F
A
S
P
V
L
L
A
------------------------------------
14
Fugue
52.65
21%
-62
- C5 -
-
5L7J
1
?
A:
[7-459]
TIS
G
V
T
P
V
A
V
M
T
K
PLPCPGKCIYCPTFAATPQSYTPES
P
A
V
L
R
A
K
S
C
EYQ
A
Y
K
Q
V
A
L
R
L
R
I
I
Q
D
M
GHPTD
K
V
E
L
I
I
M
GGTFLSAD
I
T
Y
Q
Y
G
F
I
K
D
C
Y
D
A
L
N
GVVAGS
L
E
E
A
K
T
I
N
ETAQHRCV
G
L
C
I
E
T
R
PDICG
K
A
E
I
Q
R
M
I
D
F
GTT
R
V
E
L
GVQMLDDDIYKLVERGHR
V
S
D
V
A
E
A
T
C
L
L
R
E
Y
G
L
K
V
H
Y
HWMPGLPGSS
P
E
K
D
L
A
L
S
R
M
V
F
E
DPRFCPD
G
L
K
L
Y
P
T
M
V
V
E
GT
I
L
E
Q
W
W
K
E
GR
Y
T
P
Y
P
N
G
T
M
T
G
L
I
A
D
I
K
A
L
VPPY
V
R
I
S
R
VKCRCIRCREYSGE
P
T
L
R
R
L
D
Y
P
A
S
G
----
G
K
E
I
----
F
L
S
F
E
D
ASD---
T
L
Y
G
L
----
L
R
L
R
------
I
P
C
A
---
S
L
P
V
L
G
Q
K
-
Y
G
A
K
T
G
-------------
L
V
R
E
-----
L
H
V
Y
G
T
E
L
S
--
L
G
H
R
G
--
L
G
R
K
L
L
A
-
E
A
E
C
L
A
R
D
E
F
G
L
D
S
L
A
I
L
SGVGA
R
E
Y
Y
R
S
L
G
Y
E
L
V
AGYM
C
K
H
L
D
13
Fugue
44.93
23%
-113
- C4 -
-
1WPI
-
FMP46_YEAST
A:
[1-133]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
S
F
W
K
T
L
Q
R
Q
P
R
T
I
S
L
F
T
N
D
I
A
S
N
I
K
-------
S
Q
K
C
L
----
Q
L
L
K
GDVSHR
F
D
V
E
I
A
N
R
F
P
T
W
D
Q
L
Q
Y
M
R
T
S
C
PQ
G
P
V
S
L
Q
R
Q
I
PK
L
D
S
V
-----
L
K
Y
K
H
T
D
P
T
--
F
G
M
D
L
--
Q
K
C
V
Q
R
G
L
W
N
P
K
E
A
L
W
V
D
W
E
N
K
L
V
G
N
E
P
A
D
I
D
K
Y
IIQRK-------------
7
Fugue
44.87
20%
-130
- C5 -
-
2MN4
-
?
A:
[1-94]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
T
P
E
Q
R
E
F
L
----
P
E
I
L
----
A
E
I
I
A
N
LD
P
T
K
I
L
E
E
L
L
----
R
R
G
L
------
L
T
P
A
E
L
Q
E
V
L
D
L
K
T
P
-
E
E
Q
A
K
K
-------------
L
I
D
F
-----
I
L
K
L
S
P
A
D
V
--
Q
A
R
I
N
--
V
L
R
A
H
G
Y
-
Q
A
L
A
D
K
L
N
K
Y
L
T
L
E
------------------------------
6
Fugue
43.41
12%
-71
- C5 -
-
3WX4
-
ARN_BPT4
A:
[1-98]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MII
D
S
Q
S
V
V
Q
Y
T
F
K
----
I
D
I
L
----
E
K
L
Y
K
-------
F
L
P
N
L
----
Y
H
S
I
------
V
N
E
L
V
E
E
L
H
L
E
N
N
D
F
-
L
I
G
T
Y
K
-------------
D
L
S
K
-----
A
G
Y
F
Y
V
I
P
A
PG
K
N
I
D
D
--
V
L
K
T
I
M
I
-
Y
V
H
D
Y
E
I
E
D
Y
F
E
L
E
H
H
H
H
--------------------------
9
Fugue
36.38
27%
-148
- C3 -
-
2DCV
-
TACB1_TACTR
A:
[1-42]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Y
V
S
C
L
-
F
R
G
A
R
C
-------------
R
V
Y
S
GRSCC
F
G
Y
Y
C
R
R
D
----
F
P
G
S
--
I
----
F
G
-
T
C
S
R
R
N
F
-------------------------------------
8
Fugue
35.98
19%
-107
- C5 -
-
2G7O
-
TRAM1_ECOLI
A:
[60-127]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
A
----
F
N
Q
T
----
E
F
N
K
L
-------
L
L
E
C
V
----
V
K
T
---------
Q
S
S
V
A
K
I
L
G
I
E
S
L
-
S
P
H
V
S
-----------------------------
G
N
S
--
K
F
E
Y
A
--
N
M
V
E
D
I
R
-
E
K
V
S
S
E
M
E
R
F
F
P
K
N
D
D
E
---------------------------
15
Fugue
34.90
12%
-170
- C5 -
-
1F4N
1
ROP_ECOLX
A:
[1-59]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
T
--------------
K
----
Q
E
K
T
I
-------
L
N
M
A
R
----
F
I
R
S
------
Q
A
L
T
I
L
E
K
A
N
E
L
D
---------------------------------------------
A
D
--
E
I
A
D
I
A
E
-
S
I
H
D
H
A
D
E
I
Y
R
S
A
L
A
R
F
G
DD------------------------
22
HHSearch
34.42
18%
-
- C1 -
-
5IG9
-
?
M:
[14-21]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
F
F
A
R
F
L
S
V
-------------------------------
16
HHSearch
34.19
19%
-317
- C5 -
-
1WAZ
-
?
A:
[42-67]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Y
L
D
Y
V
--
L
L
P
A
L
A
I
-
F
I
G
L
T
I
Y
A
I
Q
R
K
R
Q
------------------------------
21
HHSearch
31.98
18%
-
- C2 -
-
5IG9
-
?
N:
[14-22]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
F
F
A
R
F
L
S
V
S
------------------------------
25
HHSearch
25.34
12%
-177
* C5 *
-
2M0Q
-
KCNE2_HUMAN
A:
[45-77]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
N
F
Y
Y
V
--
I
L
Y
L
M
--
V
M
I
G
M
F
S
-
F
I
I
V
A
I
L
V
S
T
V
K
S
K
R
R
----------------------------
24
HHSearch
18.36
17%
0
- C- -
-
5B5M
-
?
H:
[6-37]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
T
H
--
Y
I
D
A
A
QI
T
I
W
A
F
W
L
-
F
F
F
G
L
I
I
--
Y
L
R
R
E
D
K
R
E
--------------------------
23
HHSearch
18.08
17%
0
- C- -
-
1EYS
3
?
H:
[7-52]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
H
--
Y
I
D
A
A
QI
T
I
W
A
F
W
L
-
F
F
F
G
L
I
I
--
Y
L
R
R
E
D
K
R
E
--------------------------