@TOME V2.3
(Mar 2018)
Ref.
-
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Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
Show Ligands of Templates
Complexes Affinity Score
Main Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Complexes Tab
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : B0VN05: (2017-11-12 )
MNSFMQQSPLELTLALDQIDNPSTILPPALLIALTTSLGSFFTCLFAYTIFDKESVKGKISLQLFMNALKNIAMAFLALTIGVILGILLTQLHTHIPFNSWYLLLLFIFLIGIELAFTHFNRTWLSWKILIVPLAAFIGSCLAGFLNYSLLGHEFTLNEILALGQGYGWYSMSGILFTQLHSAELGGIALLTDLFREIVAILLMYTMGWRFPRPAISSAGATSMDVTLAMVKQSCGTHYVPHAMMSGLLLSLLAPLLITVFLNF
Atome Classification :
(20 SA)
---------------------------------------------------------------.........10.........20......--..30..--......40..--------......------50..---------......60----------........70....--------....80........90---.----.......100-----.....-----------....110....--...120.......130.-......140.----......150.-.......--160.......170-.--..-.....----180--.---.......---190..-------.....------200.......210.......220.......230.......240.......250--....------....260..-----------------------------------------------------------
(Atome)
(Ident)
(Tito)
(Num)
(QMean)
(Ligand)
(Uniprot)
---------------------------------------------------------------MN
S
F
M
QQSP
L
-
E
L
T
L
A
LDQIDNPSTIL
P
--
P
A
L
L
I
A
--
L
T
T
S
L
G
S
F
F
T
--------
C
L
F
A
Y
T
------IFDK---------ESVK
G
K
I
S
----------
L
Q
L
F
M
N
A
L
K
N
I
A
M
A
--------
F
L
A
L
T
I
G
V
I
L
G
I
L
L
T
Q
---
L
----HTHIP
F
N
S
-------
W
Y
L
L
L
-----------
L
F
I
F
L
I
G
I
E
L
A
--
F
T
HFNR
T
W
L
S
W
K
I
L
I
V
P
-
L
A
A
F
I
G
S
C
L
A
----
G
F
L
N
Y
S
L-LG-HE
F
T
L
N
E
--
I
L
A
LGQGYG
W
Y
S
--
M
--
S
G
-
I
L
F
T
Q----LH---S---AELG
G
I
A
---
L
L
T
D
L
-------
F
R
E
I
V
------
A
I
L
L
M
Y
TMGWRFPRPAISSAGAT
S
M
D
V
T
L
A
M
V
K
Q
SCGTH
Y
V
P
H
A
M
M
S
G
L
L
L
S
---
L
L
A
P
------
L
L
I
T
V
FLNF-----------------------------------------------------------
36
Fugue
80.57
15%
-
- C2 -
-
3PV2
-
?
A:
[6-439]
-----------------------------------------------------------MPSM
A
P
V
L
K
N
I
M
P
A
-
I
V
N
V
A
V
Q
G
Y
L
P
N
R
K
F
E
S
--
I
G
S
G
V
I
--
I
D
P
N
N
G
V
I
I
T
N
DHVIRNA
S
L
I
T
V
T
------
L
Q
D
G
---------
R
R
L
K
A
R
L
I
GGDSETD
L
A
V
L
K
I
D
A
K
N
L
K
S
L
V
I
G
DSDKLEVG
D
F
V
V
A
I
G
N
P
F
G
L
S
Q
S
A
---
T
----
F
G
I
V
S
A
L
K
-------
N
F
I
Q
T
DAAINPGNSG
G
A
L
V
N
A
K
G
E
L
I
G
--
I
N
T
A
I
L
V
G
I
G
F
A
I
P
I
N
M
-
V
K
D
V
A
Q
Q
I
I
K
F---
G
S
I
H
R
G
L
-
M
G
I
F
V
Q
H
L
T
P
--
E
L
A
Q
A
M
G
Y
P
-
E
D
--
F
--
Q
G
-
A
L
V
S
Q
----
V
N
PNS
P
---
A
E
L
A
G
L
K
AGD
I
I
T
Q
I
NDTKITQ
A
T
Q
V
K
------
T
T
I
S
L
L
R
V
G
S
T
V
K
I
I
V
E
R
D
N
K
P
L
T
L
S
A
V
V
T
D
I
K
S
H
E
Q
K
L
Q
S
N
N
P
F
L
Y
G
L
A
L
R
---
A
F
E
Q
ESPPH
G
N
V
I
G
V
Q
V
V
G
ASENS
A
G
W
R
A
GIRPG
D
I
I
ISANKKPVTD
V
K
S
L
Q
T
I
A
Q
EKKK
E
L
L
V
Q
V
L
R
GP
G
S
M
Y
L
L
V
I
28
Fugue
65.29
16%
-49
- C2 -
-
1RHY
2
HIS7_CRYNJ
A:
[2-187]
---------------------------------------------------------SER
I
A
S
V
E
R
T
T
S
E
T
H
I
-
S
C
T
I
D
L
D
H
I
P
G
V
T
E
Q
K
-------
I
N
--
V
S
T
G
I
--------------
G
F
L
D
H
------
M
F
T
A
---------
L
A
K
H
G
G
M
S
----------
L
Q
L
Q
C
K
G
D
L
T
A
--
E
--------
D
C
A
L
A
L
G
E
A
F
K
K
A
L
G
E
--------
R
K
G
I
K
R
Y
G
-------
Y
A
Y
A
P
-----------
L
D
E
S
L
S
R
A
V
I
D
--
I
S
--
S
R
P
Y
F
M
C
H
L
-------------------------------
P
F
T
R
E
K
--
V
G
D
L
S
--------------------------------------
T
E
---
M
V
S
H
L
-------
L
Q
S
F
A
------
F
A
A
--------------------
G
V
T
L
H
I
D
S
I
R
---
G
E
N
--
N
H
H
I
A
E
S
A
F
K
A
---
L
A
L
A
------
I
R
M
A
I
S
R
-------------------------------------------------------------
31
Fugue
62.55
15%
-93
* C4 *
-
1UJN
-
?
A:
[1-347]
M
Q
R
L
E
V
R
E
P
V
P
Y
P
I
L
V
G
EGVLKEVPPLA
G
P
A
A
L
L
F
D
RRV
E
G
F
A
Q
E
V
A
K
A
L
GVR
H
L
L
G
L
P
G
G
EA
A
K
S
L
E
V
Y
G
K
V
-
L
S
W
L
A
E
K
G
L
P
R
N
A
T
L
L
V
V
G
G
G
T
L
T
D
--
L
G
G
F
V
A
A
T
Y
L
R
G
V
A
Y
---
L
A
F
P
T
T
------
T
L
A
I
V
D-------
A
S
V
G
G
K
T
G
----------
I
N
L
P
E
G
--
K
N
L
V
G
A
--------
F
H
F
P
Q
G
V
Y
A
E
L
R
A
L
K
T
---
L
----
P
L
P
T
F
K
E
G
-------
L
V
E
A
F
-----------
K
H
G
L
I
A
G
D
E
A
L
LK
V
E
D
L
T
P
Q
S
P
R
L
E
A
F
L
A
R
-
A
V
A
V
K
V
R
V
T
E
E
D
PL
E
K
G
K
R
R
L
-
L
N
-
L
G
H
T
L
G
H
--
A
L
E
A
Q
T
R
H
A
L
P
H
--
G
--
M
A
-
V
A
Y
G
L
----
L
Y
---
A
---
A
L
L
G
R
A
L
---
G
G
E
D
L
-------
L
P
P
V
R
------
R
L
L
L
W
L
S
P
P
P
L
P
P
L
A
F
E
D
L
L
P
Y
L
S
L
H
W
V
V
P
L
A
P
G
R
L
V
V
R
P
L
P
E
G
L
L
R
E
A
F
A
A
---
W
R
E
E
------
L
K
G
L
G
L
L
-------------------------------------------------------------
2
PsiBlast_PDB
56.44
42%
-265
- C3 -
-
5VKQ
2
?
A:
[1261-1363]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
H
G
S
L
T
W
A
S
W
K
I
L
L
L
--
L
V
A
F
I
-
V
C
P
P
----
V
W
I
G
F
T
F
P
M
G
-
H
K
F
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
13
PsiBlast_PDB
55.27
30%
-222
- C3 -
-
4I6Y
-
MVAA_PSEMV
A:
[36-81]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
L
A
N
A
G
A
L
P
M
D
I
A
N
G
M
I
E
N
V
I
G
T
F
E
L
P
Y
A
V
A
S
N
F
Q
I
N
G
R
D
V
L
V
P
------
L
V
V
-----------------------------------------------------------------
9
PsiBlast_PDB
55.24
30%
-217
- C3 -
-
4I56
1
MVAA_PSEMV
A:
[36-81]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
L
A
N
A
G
A
L
P
M
D
I
A
N
G
M
I
E
N
V
I
G
T
F
E
L
P
Y
A
V
A
S
N
F
Q
I
N
G
R
D
V
L
V
P
------
L
V
V
-----------------------------------------------------------------
10
PsiBlast_PDB
54.56
30%
-219
- C3 -
-
4I64
-
MVAA_PSEMV
A:
[36-81]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
L
A
N
A
G
A
L
P
M
D
I
A
N
G
M
I
E
N
V
I
G
T
F
E
L
P
Y
A
V
A
S
N
F
Q
I
N
G
R
D
V
L
V
P
------
L
V
V
-----------------------------------------------------------------
8
PsiBlast_PDB
54.45
30%
-210
- C3 -
-
4I4B
1
MVAA_PSEMV
A:
[36-90]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
L
A
N
A
G
A
L
P
M
D
I
A
N
G
M
I
E
N
V
I
G
T
F
E
L
P
Y
A
V
A
S
N
F
Q
I
N
G
R
D
V
L
V
P
------
L
V
V
-----------------------------------------------------------------
5
PsiBlast_PDB
54.03
30%
-226
- C3 -
-
1R31
1
MVAA_PSEMV
A:
[36-81]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
L
A
N
A
G
A
L
P
M
D
I
A
N
G
M
I
E
N
V
I
G
T
F
E
L
P
Y
A
V
A
S
N
F
Q
I
N
G
R
D
V
L
V
P
------
L
V
V
-----------------------------------------------------------------
12
PsiBlast_PDB
53.69
30%
-211
- C3 -
-
4I6W
-
MVAA_PSEMV
A:
[36-81]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
L
A
N
A
G
A
L
P
M
D
I
A
N
G
M
I
E
N
V
I
G
T
F
E
L
P
Y
A
V
A
S
N
F
Q
I
N
G
R
D
V
L
V
P
------
L
V
V
-----------------------------------------------------------------
11
PsiBlast_PDB
52.59
30%
-218
- C3 -
-
4I6A
1
MVAA_PSEMV
A:
[36-81]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
L
A
N
A
G
A
L
P
M
D
I
A
N
G
M
I
E
N
V
I
G
T
F
E
L
P
Y
A
V
A
S
N
F
Q
I
N
G
R
D
V
L
V
P
------
L
V
V
-----------------------------------------------------------------
6
PsiBlast_PDB
51.24
30%
-202
- C3 -
-
1R7I
-
MVAA_PSEMV
A:
[36-81]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
L
A
N
A
G
A
L
P
M
D
I
A
N
G
M
I
E
N
V
I
G
T
F
E
L
P
Y
A
V
A
S
N
F
Q
I
N
G
R
D
V
L
V
P
------
L
V
V
-----------------------------------------------------------------
4
PsiBlast_PDB
50.72
30%
-205
- C3 -
-
1QAY
-
MVAA_PSEMV
A:
[36-81]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
L
A
N
A
G
A
L
P
M
D
I
A
N
G
M
I
E
N
V
I
G
T
F
E
L
P
Y
A
V
A
S
N
F
Q
I
N
G
R
D
V
L
V
P
------
L
V
V
-----------------------------------------------------------------
7
PsiBlast_PDB
49.77
30%
-215
* C3 *
-
1T02
-
MVAA_PSEMV
A:
[36-81]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
L
A
N
A
G
A
L
P
M
D
I
A
N
G
M
I
E
N
V
I
G
T
F
E
L
P
Y
A
V
A
S
N
F
Q
I
N
G
R
D
V
L
V
P
------
L
V
V
-----------------------------------------------------------------
3
PsiBlast_PDB
49.02
30%
-210
- C3 -
-
1QAX
-
MVAA_PSEMV
A:
[36-81]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
L
A
N
A
G
A
L
P
M
D
I
A
N
G
M
I
E
N
V
I
G
T
F
E
L
P
Y
A
V
A
S
N
F
Q
I
N
G
R
D
V
L
V
P
------
L
V
V
-----------------------------------------------------------------
22
HHSearch
47.68
16%
-109
- C5 -
-
4N7W
2
?
A:
[162-302]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Q
I
V
--------
V
I
P
I
T
A
G
L
V
I
H
H
T
F
T
K
---
T
V
K
R
I
E
P
Y
L
P
A
M
S
-------
M
V
C
I
L
-----------
A
I
I
S
A
---
V
V
A
--
G
S
Q
S
H
I
A
S
V
G
F
V
V
I
I
A
V
-
I
L
H
N
G
I
G
L
L
S
----
G
Y
W
G
-
G
K
-
L
--
F
G
F
D
E
S
T
C
R
T
L
A
I
E
V
G
M
Q
N
S
G
--
L
--
A
A
-
T
L
G
K
I
----
Y
F
---
S
---
P
L
A
A
L
P
G
---
A
L
F
S
V
-------
W
H
N
L
S
------
G
S
L
L
A
G
Y
W
S
G
K
P
V
------------------------------------------------------------------------------------------------------------------------
1
PsiBlast_PDB
46.77
40%
-100
- C3 -
-
3EEZ
-
?
A:
[128-167]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
S
R
T
P
R
P
I
A
S
S
V
G
A
K
S
V
E
E
T
R
A
V
I
D
R
Y
R
Q
R
G
Y
V
A
H
S
V
K
I
G
-------------------------------------------------------------------------------------
32
Fugue
46.08
11%
-73
- C2 -
-
2YYS
3
?
A:
[1-283]
---------------------------------------------------------------
M
R
E
E
I
G
Y
V
P
V
G
E
A
E
L
Y
V
E
D
V
G
P
V
E
G
--
P
--
A
L
F
V
L
H
G
G
P
G
G
N
A
Y
V
L
R
E
--------
G
L
Q
D
Y
L
EGFR
V
V
Y
F
D
Q
RGSGRSLEL
P
Q
D
P
R
L
F
T
----------
V
D
A
L
V
E
D
T
L
L
L
A
E
A
L
GVE
R
F
G
-
L
L
A
H
G
F
G
A
V
V
A
L
E
V
L
R
---
R
----
F
P
Q
---------------
A
E
-----------
G
A
I
L
L
A
P
W
V
N
F
--
P
W
L
A
A
R
L
A
E
A
A
G
L
A
P
L
P
D
P
E
E
N
L
K
E
A
L
K
----
R
E
E
P
K
A
L
-
F
D
-
R
L
M
F
P
T
P
--
R
G
R
M
A
Y
E
W
L
A
E
G
-----
A
G
-
I
L
G
S
D
----
A
P
---
G
---
L
A
F
L
R
N
G
---
L
W
R
L
D
-------
Y
T
P
Y
L
TPER
R
P
L
Y
V
L
V
G
E
R
D
G
T
S
Y
P
Y
A
E
E
V
A
S
R
L
R
A
P
I
R
V
L
P
-
E
A
G
H
Y
L
W
I
D
A
P
E
A
F
E
E
A
F
K
E
---
A
L
A
A
------
L
V
P
A
L
R
G
P
------------------------------------------------------------
20
HHSearch
45.16
17%
-125
- C5 -
-
5BZ3
4
?
A:
[31-167]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
V
--------
I
G
E
V
L
A
G
V
L
V
G
P
A
L
L
G
LVH
E
----
G
E
I
L
E
F
L
A
-------
E
L
G
A
V
-----------
F
L
L
F
M
V
G
L
E
T
R
--
L
K
D
I
L
A
--
V
G
K
E
A
F
L
V
A
-
V
L
G
V
A
L
P
F
L
G
----
G
Y
L
Y
-
G
L
-
E
--
I
G
F
E
T
L
P
--
A
L
F
L
G
T
A
L
V
A
T
S
V
G
I
--
T
A
-
R
V
L
Q
E
----
L
G
VL-
S
---
R
P
Y
S
R
I
I
---
L
G
A
A
V
-------
I
D
D
V
L
------
G
L
I
V
L
A
C
V
N
----------------------------------------------------------------------------------------------------------------------------
18
HHSearch
44.85
14%
-169
- C5 -
-
5A1S
3
?
D:
[83-233]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
P
--------
V
M
I
F
L
V
A
A
Y
F
V
Y
A
G
I
F
---
T
----
Q
K
E
I
D
A
I
S
N
V
M
DKSN
F
L
N
L
F
-----------
I
A
V
L
I
T
G
A
I
L
S
--
V
N
R
K
L
L
L
K
S
L
L
G
Y
I
P
T
I
-
L
A
G
I
V
G
A
S
L
F
----
G
I
V
I
-
G
L
-
C
--
F
G
I
P
V
D
R
--
I
M
M
L
Y
V
L
P
I
M
G
G
--
G
NG
A
G
A
V
P
L
S
E
I
Y
H
S
V
T
---
G
RS
R
E
E
Y
Y
S
T
A
---
I
A
I
L
T
-------
I
A
N
I
F
------
A
I
I
F
A
A
L
L
D
M
V
--------------------------------------------------------------------------------------------------------------------------