@TOME V2.3
(Mar 2018)
Ref.
-
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Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
Show Ligands of Templates
Complexes Affinity Score
Main Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Complexes Tab
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : B0VQX7: (2017-11-29 )
MSIETKTTVSRIGETDQLYLTENTPELALERAELRMQLVTLSRVRQEQIHFLQEAIVLLEQARMEYEEMPMSLYLNLSLHLAKAYMLYFELNKEKRFALIAQQILKPLAHHQHGDIYFFLAYASAAQQESALTRHWLTKYLSTAQCDLELLHEHPIFNPVRHELWYKNLIKLRTH
Atome Classification :
(20 SA)
----------------------------------------------.........10.-------.--.......20..-....------..30------......---..-----------.40...--.....50......--------..60.....--...70----........-.80-....-----.--....90..--------....------..--100---....----...-..110.....-------------...120........130......---.-------140..-----.....150-------....-----...-..160.....---------.-------.170...----------------------------------------------------------------------------------------------
(Atome)
(Ident)
(Tito)
(Num)
(QMean)
(Ligand)
(Uniprot)
----------------------------------------------MSIET
K
T
T
V
S
-R-------I--GET
D
Q
L
Y
LTEN-
T
P
E
L
------
A
L
E
-------
R
A
E
L
R
M
---
Q
L
-----------
V
T
L
S
R
V
--
R
Q
E
Q
I
H
F
L
Q
E
A
I
V
--------
L
L
E
Q
A
R
M
E
Y
--
E
EM
P
-----
M
S
L
Y
L
N
L
S
-
L
H
--
L
A
K
A
-----
Y
--
M
L
Y
F
E
LNK--------
E
K
R
F
------
A
L
--
I
-----
A
Q
Q
I
----
L
K
P
-
L
AH-HQHG
D
I
-------------
Y
F
F
L
A-YAS
A
A
Q
Q
E
S
A
L
T
R
H
W
L
T
---
K
-------
Y
L
S
T
A
-----
Q
C
D
L
E
L
---------
L
HEH-----PIF-
N
P
V
R
H
E
L
W
Y
K
---------
N
-------
L
I
K
LRTH----------------------------------------------------------------------------------------------
32
Fugue
63.09
25%
-94
- C5 -
-
1BM9
-
RTP_BACSU
A:
[3-122]
-------------------------------------------------
E
E
K
R
S
------------------------
S
-
T
G
F
L
------
V
K
Q
-------
R
A
F
L
K
L
---
Y
M
-----------
I
T
M
T
E
----
Q
E
R
L
Y
G
L
K
------------
L
L
E
V
L
R
S
E
F
--
K
E
-----------
I
G
F
K
-
P
N
--
H
T
E
V
-----
Y
--
R
S
L
H
E
L
L
D
--------
D
G
I
--------
L
--
K
-----
Q
I
K
V
----
K
K
E
-
G
A
K
-
L
Q
E
V
V
L
-------------
Y
Q
F
K
D
-
Y
E
A
A
K
L
Y
K
K
Q
L
-
K
V
E
L
D
---
R
-------
C
K
K
L
I
-----
E
K
A
L
S
D
---------
N
F
-------------------------------------------------------------------------------------------------------------------------------------------
10
PsiBlast_PDB
60.58
28%
-126
- C7 -
-
3AQL
-
?
A:
[218-315]
---------------------------------------------------------------------------------------------------------------------------------------
H
L
F
E
E
S
L
K
--------
L
L
-
Q
A
G
Y
G
Y
--
E
T
Y
K
-----
L
L
C
E
Y
H
L
F
-
Q
P
--
L
F
P
T
-----
I
--
T
R
Y
F
T
E
N
G
--------
D
S
P
M
------
E
R
--
I
-----
I
E
Q
V
----
L
K
N
-
T
D
T
-
R
I
H
N
D
M
RVN
P
A
F
L
F
A
A
M
F
W
Y
P
L
L
E
-
T
A
Q
K
I
A
Q
E
S
G
L
T
Y
H
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
9
PsiBlast_PDB
60.38
28%
-112
- C7 -
-
3AQK
-
?
A:
[234-331]
---------------------------------------------------------------------------------------------------------------------------------------
H
L
F
E
E
S
L
K
--------
L
L
-
Q
A
G
Y
G
Y
--
E
T
Y
K
-----
L
L
C
E
Y
H
L
F
-
Q
P
--
L
F
P
T
-----
I
--
T
R
Y
F
T
E
N
G
--------
D
S
P
M
------
E
R
--
I
-----
I
E
Q
V
----
L
K
N
-
T
D
T
-
R
I
H
N
D
M
R
V
N
P
A
F
L
F
A
AMF
W
Y
P
L
L
E
-
T
A
Q
K
I
A
Q
E
S
G
L
T
Y
H
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2
PsiBlast_PDB
58.74
23%
-108
- C7 -
-
5TL4
-
?
A:
[90-170]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
W
E
P
N
K
--------
A
K
Q
Y
------
V
P
--
V
-----
T
---------
P
-
Y
G
H
-
V
I
G
D
G
I
-------------
I
F
Y
L
A
-
E
E
E
F
V
Y
V
G
R
A
P
A
A
N
W
L
M
---
Y
-------
H
A
Q
T
G
-----
G
Y
N
V
D
I
---------
V
H
D
D
RSPSR
P
M
G
-
K
P
V
Q
R
I
S
W
------------------------------------------------------------------------------------------------------------------------
11
PsiBlast_PDB
58.53
28%
-116
- C7 -
-
3AQN
-
?
A:
[218-315]
---------------------------------------------------------------------------------------------------------------------------------------
H
L
F
E
E
S
L
K
--------
L
L
-
Q
A
G
Y
G
Y
--
E
T
Y
K
-----
L
L
C
E
Y
H
L
F
-
Q
P
--
L
F
P
T
-----
I
--
T
R
Y
F
T
E
N
G
--------
D
S
P
M
------
E
R
--
I
-----
I
E
Q
V
----
L
K
N
-
T
D
T
-
R
I
H
N
D
M
R
V
N
P
A
F
L
F
A
A
M
F
W
Y
P
L
L
E
-
T
A
Q
K
I
A
Q
E
S
G
L
T
Y
H
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
31
Fugue
57.96
20%
49
- C2 -
-
4N7R
-
GLUBP_ARATH
C:
[55-306]
--------------------------------STHKPFPAEVSRSI
M
E
L
S
S
V
G
T
L
S
-
T
LTHDGWP
L
--
G
V
G
V
R
F
A
V
D
K
D
G
T
P
V
L
------
C
L
N
RSVSPDK
R
S
A
L
H
V
---
Q
L
EQCGLRTPQCT
I
Q
G
S
I
G
--
R
P
G
D
D
T
V
L
K
R
L
S
A
--------
T
W
R
E
K
F
G
E
E
VK
E
D
S
L
-----
Y
V
V
A
V
D
R
V
-
L
Q
--
M
E
D
F
MEDGI
W
--
V
A
S
S
D
Y
K
N
--------
A
S
P
D
------
P
L
RD
I
-----
A
E
D
I
----
V
N
Q
-
I
N
A
-
N
N
M
E
D
I
-------------
F
R
F
C
N
V
Y
V
D
L
D
F
V
V
S
E
T
K
M
I
W
M
D
---
R
LGFDLRV
W
S
P
R
G
-----
V
Y
D
V
R
I
PFPMEVTDE
K
G
A
K
-----
S
S
F
-
N
G
M
S
Q
L
A
W
E
V
EKSYCPADF
N
-------
K
V
K
L
L
K
Q
VV--------------------------------------------------------------------------------------------
7
PsiBlast_PDB
57.80
23%
-104
- C7 -
-
5X1M
2
?
A:
[89-165]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
W
E
P
N
K
--------
A
K
Q
Y
------
V
P
--
V
-----
T
---------
P
-
Y
G
H
-
V
I
G
D
G
I
-------------
I
F
Y
L
A
-
E
E
E
F
V
Y
V
G
R
A
P
A
A
N
W
L
M
---
Y
-------
H
A
Q
T
G
-----
G
Y
N
V
D
I
---------
V
H
D
D
RSPSR
P
M
G
-
K
P
V
Q
R
I
S
W
------------------------------------------------------------------------------------------------------------------------
8
PsiBlast_PDB
57.30
23%
-110
- C7 -
-
5X1N
2
?
A:
[89-170]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
W
E
P
N
K
--------
A
K
Q
Y
------
V
P
--
V
-----
T
---------
P
-
Y
G
H
-
V
I
G
D
G
I
-------------
I
F
Y
L
A
-
E
E
E
F
V
Y
V
G
R
A
P
A
A
N
W
L
M
---
Y
-------
H
A
Q
T
G
-----
G
Y
N
V
D
I
---------
V
H
D
D
RSPSR
P
M
G
-
K
P
V
Q
R
I
S
W
------------------------------------------------------------------------------------------------------------------------
5
PsiBlast_PDB
56.96
23%
-111
- C7 -
-
5X1K
2
?
A:
[89-165]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
W
E
P
N
K
--------
A
K
Q
Y
------
V
P
--
V
-----
T
---------
P
-
Y
G
H
-
V
I
G
D
G
I
-------------
I
F
Y
L
A
-
E
E
E
F
V
Y
V
G
R
A
P
A
A
N
W
L
M
---
Y
-------
H
A
Q
T
G
-----
G
Y
N
V
D
I
---------
V
H
D
D
RSPSR
P
M
G
-
K
P
V
Q
R
I
S
W
------------------------------------------------------------------------------------------------------------------------
6
PsiBlast_PDB
56.78
23%
-106
- C7 -
-
5X1L
1
?
A:
[89-165]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
W
E
P
N
K
--------
A
K
Q
Y
------
V
P
--
V
-----
T
---------
P
-
Y
G
H
-
V
I
G
D
G
I
-------------
I
F
Y
L
A
-
E
E
E
F
V
Y
V
G
R
A
P
A
A
N
W
L
M
---
Y
-------
H
A
Q
T
G
-----
G
Y
N
V
D
I
---------
V
H
D
D
RSPSR
P
M
G
-
K
P
V
Q
R
I
S
W
------------------------------------------------------------------------------------------------------------------------
4
PsiBlast_PDB
56.21
23%
-105
- C7 -
-
5X1J
1
?
A:
[89-165]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
W
E
P
N
K
--------
A
K
Q
Y
------
V
P
--
V
-----
T
---------
P
-
Y
G
H
-
V
I
G
D
G
I
-------------
I
F
Y
L
A
-
E
E
E
F
V
Y
V
G
R
A
P
A
A
N
W
L
M
---
Y
-------
H
A
Q
T
G
-----
G
Y
N
V
D
I
---------
V
H
D
D
RSPSR
P
M
G
-
K
P
V
Q
R
I
S
W
------------------------------------------------------------------------------------------------------------------------
18
PsiBlast_PDB
54.73
25%
-150
- C7 -
-
3WKI
1
CEEP_RHOMR
A:
[179-244]
--------------------------------------------------------------------------------------------------------------------------------------------------------
L
E
D
A
R
L
S
A
--
K
D
A
P
-----
E
P
R
S
M
N
T
H
-
L
H
--
V
L
E
A
-----
Y
--
A
N
L
Y
R
V
W
P
--------
E
T
E
L
------
A
A
--
R
-----
L
Q
A
L
I
E
L
F
L
R
A
-
I
Y
H
-
P
A
T
G
H
L
-------------
I
L
F
F
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
30
Fugue
53.81
17%
31
* C5 *
-
5TSZ
-
?
A:
[13-142]
----------------------------------------------
S
S
L
E
G
G
S
E
F
S
E
R
-------
I
--
G
N
S
L
S
S
F
L
S
E
S
-
A
S
-----------------------------------------
L
E
V
I
G
--
N
E
L
A
D
N
I
A
N
E
I
V
S
--------
S
L
Q
K
D
S
A
S
F
--
L
Q
S
G
-----
F
D
V
K
T
Q
L
K
-
A
T
--
A
K
K
V
-----
L
--
V
E
A
L
K
A
A
L
--------
E
P
T
E
------
K
I
--
V
-----
A
S
T
I
----
K
P
P
-----
R
V
S
E
D
A
-------------
Y
F
L
L
G
-
P
V
V
K
T
L
F
N
K
V
E
D
V
--------------------------------------------------
L
H
-
K
P
I
P
D
T
I
W
E
Y
----------------------------------------------------------------------------------------------------------------------
37
Fugue
53.35
17%
35
- C6 -
-
2W1N
-
A:
[10-237]
----------------------------AE
V
T
G
S
V
S
L
E
A
L
EEVQVG
E
N
I
E
V
G
V
G
I
D
-
E
-------
L
VN
A
E
A
F
A
Y
D
F
T
L
N
-
Y
D
E
N
------
A
F
E
-------
Y
V
E
A
I
S
D
DG
V
F
-----------
V
N
A
K
K
I
--
E
D
G
K
V
R
V
L
V
S
S
L
T
GEPLPAKE
V
L
A
K
V
V
L
R
A
--
E
A
K
T
-----
E
G
S
N
L
S
V
T
N
S
S
--
V
G
D
G
-----
E
--
G
L
V
H
E
I
A
G
--------
T
E
K
T
------
V
N
--
I
I
EGTS
P
E
I
V
----
V
N
P
-
V
R
D
-
F
K
A
S
E
I
NK-----------
K
N
V
T
V
-
T
W
T
E
P
E
T
T
E
G
L
E
G
Y
I
L
Y
K
DG
K
-------
K
V
A
E
I
G
KDET
S
Y
T
F
K
K
---------
L
N
R
H
-----
T
I
Y
-
N
-
F
K
I
A
A
K
Y
S
---------
N
GEV
S
S
K
E
S
L
T
L
R
T
A
----------------------------------------------------------------------------------------------
15
PsiBlast_PDB
53.35
25%
-146
- C7 -
-
3WKF
-
CEEP_RHOMR
A:
[179-244]
--------------------------------------------------------------------------------------------------------------------------------------------------------
L
E
D
A
R
L
S
A
--
K
D
A
P
-----
E
P
R
S
M
N
T
H
-
L
H
--
V
L
E
A
-----
Y
--
A
N
L
Y
R
V
W
P
--------
E
T
E
L
------
A
A
--
R
-----
L
Q
A
L
I
E
L
F
L
R
A
-
I
Y
H
-
P
A
T
G
H
L
-------------
I
L
F
F
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
17
PsiBlast_PDB
51.11
25%
-140
- C7 -
-
3WKH
1
CEEP_RHOMR
A:
[179-244]
--------------------------------------------------------------------------------------------------------------------------------------------------------
L
E
D
A
R
L
S
A
--
K
D
A
P
-----
E
P
R
S
M
N
T
H
-
L
H
--
V
L
E
A
-----
Y
--
A
N
L
Y
R
V
W
P
--------
E
T
E
L
------
A
A
--
R
-----
L
Q
A
L
I
E
L
F
L
R
A
-
I
Y
H
-
P
A
T
G
H
L
-------------
I
L
F
F
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
16
PsiBlast_PDB
50.74
25%
-143
- C7 -
-
3WKG
1
CEEP_RHOMR
A:
[179-244]
--------------------------------------------------------------------------------------------------------------------------------------------------------
L
E
D
A
R
L
S
A
--
K
D
A
P
-----
E
P
R
S
M
N
T
H
-
L
H
--
V
L
E
A
-----
Y
--
A
N
L
Y
R
V
W
P
--------
E
T
E
L
------
A
A
--
R
-----
L
Q
A
L
I
E
L
F
L
R
A
-
I
Y
H
-
P
A
T
G
H
L
-------------
I
L
F
F
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
38
Fugue
49.60
18%
39
- C4 -
-
5JEN
-
LYSC_CHICK (first)
A:
[62-271]
-----------------------------------------------
I
V
K
A
I
T
F
I
E
-
I
-------
K
--
E
E
K
D
Q
S
S
I
D
V
K
-
T
P
A
L
S
GLSN
K
E
L
E
-------
N
S
I
N
E
K
---
Y
L
-----------
K
E
S
Q
Q
L
--
Y
K
E
F
I
Q
S
T
S
K
N
K
K
--------
G
H
L
S
I
Y
S
D
Y
--
E
T
V
T
DTPD
L
L
S
I
R
R
N
I
E
-
T
T
--
Q
A
S
S
-----
Y
T
Q
S
R
Y
I
T
I
D
K
KNDILLT
L
K
S
L
F
KDER
Y
I
K
V
--
I
-----
S
Q
N
I
----
K
E
Q
M
K
Q
Q
M
K
E
D
P
N
K
-------------
I
Y
W
L
T
-
D
E
D
A
E
P
F
K
T
I
L
P
D
Q
--
T
---
F
-------
Y
I
T
E
D
-----
H
K
L
V
I
S
---------
F
D
E
Y
EVA--
P
G
Y
M
G
V
T
E
F
T
I
P
T
G
---------
V
-------
I
S
N
L
L
V
G
ERYIR-----------------------------------------------------------------------------------------
3
PsiBlast_PDB
48.98
23%
-115
- C7 -
-
5X1I
1
?
A:
[89-165]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
W
E
P
N
K
--------
A
K
Q
Y
------
V
P
--
V
-----
T
---------
P
-
Y
G
H
-
V
I
G
D
G
I
-------------
I
F
Y
L
A
-
E
E
E
F
V
Y
V
G
R
A
P
A
A
N
W
L
M
---
Y
-------
H
A
Q
T
G
-----
G
Y
N
V
D
I
---------
V
H
D
D
RSPSR
P
M
G
---
V
Q
R
I
S
W
------------------------------------------------------------------------------------------------------------------------
36
Fugue
48.56
21%
-19
- C3 -
-
4X2Z
-
A:
[9-309]
Q
K
T
I
Y
L
T
EDGV
K
Y
R
S
I
V
L
K
PGDSLGQFG
Q
V
Y
A
K
NKIVFTADDVEDK
E
I
L
Y
V
P
T
T
D
K
-
S
-------
I
--
L
E
Y
Y
G
L
D
A
Q
K
Y
-
V
I
Y
L
------
Q
T
L
-------
A
Q
K
W
N
V
---
Q
Y
-----------
R
D
N
F
L
I
L
E
W
R
D
G
N
C
W
I
S
S
A
I
V
--------
L
L
Q
A
A
K
I
R
F
--
K
G
F
L
-----
T
E
A
W
A
K
L
L
-
G
G
DP
T
D
F
V
-----
A
--
W
C
Y
A
S
C
T
A
--------
K
V
G
D
------
F
S
--
D
-----
A
N
W
L
----
L
A
N
-
L
A
E
-
H
F
D
A
D
Y
------------------------------
T
N
A
F
L
K
---
K
-------
R
V
S
C
N
C
G
---
I
K
S
Y
E
L
---------
R
G
L
E
-----
A
C
I
-
Q
P
V
R
A
T
-------------
N
-------
L
L
H
F
K
T
Q
Y
S
N
C
PTCG
A
N
N
T
D
E
V
I
E
A
S
L
P
Y
L
L
L
F
A
TD
G
P
A
T
V
D
C
D
EDAV
G
T
V
V
F
V
G
STNS
G
H
C
Y
T
Q
A
AG
Q
A
F
D
NLAKD
R
K
F
G
KKSPYI
T
A
M
Y
T
R
F
A
F
K
N
ETS