@TOME V2.3
(Mar 2018)
Ref.
-
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Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
Show Ligands of Templates
Complexes Affinity Score
Main Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Complexes Tab
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : B0VRA0: (2017-12-01 )
MQGIDLHTHSNISDGTLSPELLVQAAVDVKLHTLALTDHDTMDGLQRARNAAQPHDLQIISGVEISSQWSRPSTKKSYSVHIVALNMQDEAPILEALEQQKRIRAQRAVVICELLKKCIGFDIYQDVLDKVENQPDRITRTHIAKTLVEKNVVSRPQQAFDRFLKEGKRAFVKFEGLGLKETIEVIHNSKGLAVLAHPTRYDLSATNTRYLIEIFASYGGDAVELPPPVDPLSTRQMIDRMIDQHHLAISIGSDFHGENMPWIKLGNTPKPTSNQQCIWERFI
Atome Classification :
(20 SA)
-----------------------------------------------------------------------------------------------------------.........10.-.--.....----.20........30........------------40...--------..-------------.----------------.---.----50------------------------..----.---.-.....60........70....----....80-.......-.--90-.....-...100......-...110........120.-......-130.-.......140.......150.......160.......170.......180.......190.....---..200-..---.-.-----------.-.-..210---..-..-.-...220.......230----.......240.----.....-.250.......260.......270.......280.----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
(Atome)
(Ident)
(Tito)
(Num)
(QMean)
(Ligand)
(Uniprot)
-----------------------------------------------------------------------------------------------------------MQ
G
I
D
LHTHSNI-S--DGTL
S
----
P
E
L
L
V
Q
A
A
V
D
V
K
L
H
T
L
A
LTDH------------
D
T
M
D
G
--------
L
Q
-------------
R
----------------
A
---R----N-------------------------AA----Q---P-H
D
L
Q
I
I
S
G
V
E
ISSQWSRPSTK----
K
S
Y
S
V
H
-
I
V
A
LNMQ-D--E
A
-
P
I
L
E
A
-
L
E
Q
Q
--
K
R
I
R
A
Q
-
R
A
V
V
-
I
C
E
L
L
K
K
C
I
G
F
D
I
-
Y
Q
D
V
L
D
-
K
V-E-NQP
D
R
I
T
R
T
H
I
A
K
T
L
V
E
K
N
VVSR
P
Q
Q
A
F
D
R
F
L
K
EG
K
R
A
F
V
K
FEGL
G
L
K
E
T
I
E
V
I
HNSK
G
L
A
V
L
AH---PTR-Y-DL---S-A-----------T-N-
T
R
Y
L
----
I
E
-
I
F
-
A
-
S
YGG
D
A
V
ELPPPVDPL----
S
T
R
Q
M
I
D
R
M
I
D----QH
H
L
A
-
I
S
IGSDFHGENM
P
W
I
KLGNTPKPTSN
Q
Q
C
I
W
E
RFI----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
23
HHSearch
87.08
33%
0
- C- -
-
2YB4
-
35NBP_CHRVO
A:
[2-255]
------------------------------------------------------------------------------------------------------------
A
N
I
D
L
H
F
H
S
R
T
-
S
--
D
G
A
L
T
----
P
T
E
V
I
D
R
A
A
A
R
A
P
A
L
L
A
L
T
D
H
------------
D
C
T
G
G
--------
L
A
-------------
E
----------------
A
---
A
----
A
-------------------------
A
A
----
A
---
R
-
R
G
I
P
F
L
N
G
V
E
V
S
V
S
W
G
----------
R
H
T
V
H
-
I
V
G
L
G
I
D
-
P
A-
E
P
-
A
L
A
A
G
-
L
K
S
I
--
R
E
G
R
L
E
-
R
A
R
Q
-
M
G
A
S
L
E
A
A
-
G
I
A
G
C
F
D
G
A
M
R
-
W
C
---
D
N
P
E
M
I
S
R
T
H
F
A
R
H
L
V
D
S
G
A
V
K
D
M
R
T
V
F
R
K
Y
L
T
P
G
K
P
G
Y
V
S
H
Q
W
A
S
L
E
D
A
V
G
W
I
V
G
A
G
G
M
A
V
I
A
H
---
P
G
R
Y
D
-
M
G
-----
R
-----------
T
-
L
-
I
E
R
L
----
I
L
-
D
F
-
Q
-
A
A
G
G
Q
G
I
E
V
A
S
G
S
H
S
L
----
D
D
M
H
K
F
A
L
H
A
D
----
R
H
G
L
Y
-
A
S
S
G
S
D
F
H
A
P
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
22
HHSearch
87.08
33%
0
- C- -
-
2YB1
1
35NBP_CHRVO
A:
[2-255]
------------------------------------------------------------------------------------------------------------
A
N
I
D
L
H
F
H
S
R
T
-
S
--
D
G
A
L
T
----
P
T
E
V
I
D
R
A
A
A
R
A
P
A
L
L
A
L
T
D
H
------------
D
C
T
G
G
--------
L
A
-------------
E
----------------
A
---
A
----
A
-------------------------
A
A
----
A
---
R
-
R
G
I
P
F
L
N
G
V
E
V
S
V
S
W
G
----------
R
H
T
V
H
-
I
V
G
L
G
I
D
-
P
A-
E
P
-
A
L
A
A
G
-
L
K
S
I
--
R
E
G
R
L
E
-
R
A
R
Q
-
M
G
A
S
L
E
A
A
-
G
I
A
G
C
F
D
G
A
M
R
-
W
C
---
D
N
P
E
M
I
S
R
T
H
F
A
R
H
L
V
D
S
G
A
V
K
D
M
R
T
V
F
R
K
Y
L
T
P
G
K
P
G
Y
V
S
H
Q
W
A
S
L
E
D
A
V
G
W
I
V
G
A
G
G
M
A
V
I
A
H
---
P
G
R
Y
D
-
M
G
-----
R
-----------
T
-
L
-
I
E
R
L
----
I
L
-
D
F
-
Q
-
A
A
G
G
Q
G
I
E
V
A
S
G
S
H
S
L
----
D
D
M
H
K
F
A
L
H
A
D
----
R
H
G
L
Y
-
A
S
S
G
S
D
F
H
A
P
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2
PsiBlast_PDB
86.08
32%
-30
- C4 -
-
2YB4
-
35NBP_CHRVO
A:
[2-273]
------------------------------------------------------------------------------------------------------------
A
N
I
D
L
H
F
H
S
R
T
-
S
--
D
G
A
L
T
----
P
T
E
V
I
D
R
A
A
A
R
A
P
A
L
L
A
L
T
D
H
------------
D
C
T
G
G
--------
L
A
-------------
E
----------------
A
---
A
----
A
-------------------------
A
A
----
A
---
R
-
R
G
I
P
F
L
N
G
V
E
V
S
V
S
W
G
R
----------
H
T
V
H
-
I
V
G
L
G
I
D
-
P
--
A
E
-
P
A
L
A
A
G
L
K
S
I
--
R
E
G
R
L
E
-
R
A
R
Q
-
M
G
A
S
L
E
A
A
G
I
A
G
C
-
F
D
G
A
M
R
-
W
C
-
D
-
N
-
P
E
M
I
S
R
T
H
F
A
R
H
L
V
D
S
G
A
V
K
D
M
R
T
V
F
R
K
Y
L
T
P
G
K
P
G
Y
V
S
H
Q
W
A
S
L
E
D
A
V
G
W
I
V
G
A
G
G
M
A
V
I
A
H
---
P
G
R
-
Y
-
D
M
---
G
-
R
-----------
T
-
L
-
I
E
R
L
----
I
L
-
D
F
-
Q
-
A
A
G
G
Q
G
I
E
V
A
S
G
S
H
S
L
----
D
D
M
H
K
F
A
L
H
A
D
----
R
H
G
L
Y
-
A
S
S
G
S
D
F
H
A
P
G
E
---
D
V
G
H
T
E
D
L
P
P
I
C
R
P
I
W
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
1
PsiBlast_PDB
84.57
32%
-34
- C4 -
-
2YB1
1
35NBP_CHRVO
A:
[2-273]
------------------------------------------------------------------------------------------------------------
A
N
I
D
L
H
F
H
S
R
T
-
S
--
D
G
A
L
T
----
P
T
E
V
I
D
R
A
A
A
R
A
P
A
L
L
A
L
T
D
H
------------
D
C
T
G
G
--------
L
A
-------------
E
----------------
A
---
A
----
A
-------------------------
A
A
----
A
---
R
-
R
G
I
P
F
L
N
G
V
E
V
S
V
S
W
G
R
----------
H
T
V
H
-
I
V
G
L
G
I
D
-
P
--
A
E
-
P
A
L
A
A
G
L
K
S
I
--
R
E
G
R
L
E
-
R
A
R
Q
-
M
G
A
S
L
E
A
A
G
I
A
G
C
-
F
D
G
A
M
R
-
W
C
-
D
-
N
-
P
E
M
I
S
R
T
H
F
A
R
H
L
V
D
S
G
A
V
K
D
M
R
T
V
F
R
K
Y
L
T
P
G
K
P
G
Y
V
S
H
Q
W
A
S
L
E
D
A
V
G
W
I
V
G
A
G
G
M
A
V
I
A
H
---
P
G
R
-
Y
-
D
M
---
G
-
R
-----------
T
-
L
-
I
E
R
L
----
I
L
-
D
F
-
Q
-
A
A
G
G
Q
G
I
E
V
A
S
G
S
H
S
L
----
D
D
M
H
K
F
A
L
H
A
D
----
R
H
G
L
Y
-
A
S
S
G
S
D
F
H
A
P
G
E
---
D
V
G
H
T
E
D
L
P
P
I
C
R
P
I
W
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
21
HHSearch
70.62
28%
3
- C4 -
-
3O0F
3
?
A:
[12-275]
-----------------------------------------------------------------------------------------------------------
A
Q
G
W
D
I
H
C
H
T
V
F
-
S
--
D
G
T
E
T
----
P
R
T
L
V
E
Q
A
R
K
L
G
L
H
G
V
A
I
A
D
H
------------
D
T
T
A
G
--------
W
D
-------------
E
----------------
A
---
T
----
E
-------------------------
A
S
----
E
---
E
-
I
G
L
P
L
L
L
G
T
E
I
T
A
V
D
E
----------
D
V
S
V
H
-
M
L
A
F
Q
Y
D
-
P
S-
N
E
-
H
I
S
S
M
-
F
A
N
T
--
R
A
A
R
L
R
-
R
T
K
R
-
M
V
E
R
L
S
Q
--
D
F
P
I
T
W
D
D
V
L
A
-
Q
V
-
K
E
G
E
R
T
T
I
G
R
P
H
I
A
D
A
L
V
A
A
G
V
Y
E
T
R
S
D
A
F
A
D
A
V
S
A
K
S
K
Y
Y
I
P
T
P
S
P
S
T
H
E
V
I
A
A
V
K
G
A
G
G
V
V
V
A
A
H
---
A
G
D
P
Q
-
R
N
---
R
-
R
-----------
L
-
L
-
S
D
E
Q
----
L
D
-
A
M
-
I
-
A
D
G
L
D
G
L
E
V
W
H
R
G
N
P
P
----
E
Q
R
E
R
L
L
T
I
A
A
----
R
H
D
L
L
-
V
T
G
G
S
D
W
H
G
K
G
K
P
N
-
G
L
G
E
N
L
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
4
PsiBlast_PDB
66.88
27%
2
- C4 -
-
3O0F
3
?
A:
[13-268]
------------------------------------------------------------------------------------------------------------
Q
G
W
D
I
H
C
H
T
V
F
-
S
--
D
G
T
E
T
----
P
R
T
L
V
E
Q
A
R
K
L
G
L
H
G
V
A
I
A
D
H
------------
D
T
T
A
G
--------
W
D
-------------
E
----------------
A
---
T
----
E
-------------------------
A
S
----
E
---
E
-
I
G
L
P
L
L
L
G
T
E
I
T
------
A
V
D
----
E
D
V
S
V
H
-
M
L
A
F
Q
Y
D
P
S
--
N
E
-
H
I
S
S
M
-
F
A
N
T
--
R
A
A
R
L
R
-
R
T
K
R
-
M
V
E
R
L
S
Q
D
F
P
I
-
T
-
W
D
D
V
L
A
-
Q
V
K
E
-
G
E
R
T
T
I
G
R
P
H
I
A
D
A
L
V
A
A
G
V
Y
E
T
R
S
D
A
F
A
D
A
V
S
A
K
S
K
Y
Y
I
P
T
P
S
P
S
T
H
E
V
I
A
A
V
K
G
A
G
G
V
V
V
A
A
H
AGD
P
Q
R
------------------------
N
-
R
R
L
L
S
D
E
Q
L
D
-
A
M
-
I
-
A
D
G
L
D
G
L
E
V
W
H
R
G
N
P
P
----
E
Q
R
E
R
L
L
T
I
A
A
----
R
H
D
L
L
-
V
T
G
G
S
D
W
H
G
K
G
K
P
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
3
PsiBlast_PDB
65.28
27%
7
- C4 -
-
3E0F
-
?
A:
[13-268]
------------------------------------------------------------------------------------------------------------
Q
G
W
D
I
H
C
H
T
V
F
-
S
--
D
G
T
E
T
----
P
R
T
L
V
E
Q
A
R
K
L
G
L
H
G
V
A
I
A
D
H
------------
D
T
T
A
G
--------
W
D
-------------
E
----------------
A
---
T
----
E
-------------------------
A
S
----
E
---
E
-
I
G
L
P
L
L
L
G
T
E
I
T
------
A
V
D
----
E
D
V
S
V
H
-
M
L
A
F
Q
Y
D
P
S
--
N
E
-
H
I
S
S
M
-
F
A
N
T
--
R
A
A
R
L
R
-
R
T
K
R
-
M
V
E
R
L
S
Q
D
F
P
I
-
T
-
W
D
D
V
L
A
-
Q
V
K
E
-
G
E
R
T
T
I
G
R
P
H
I
A
D
A
L
V
A
A
G
V
Y
E
T
R
S
D
A
F
A
D
A
V
S
A
K
S
K
Y
Y
I
P
T
P
S
P
S
T
H
E
V
I
A
A
V
K
G
A
G
G
V
V
V
A
A
H
AGD
P
Q
R
------------------------
N
-
R
R
L
L
S
D
E
Q
L
D
-
A
M
-
I
-
A
D
G
L
D
G
L
E
V
W
H
R
G
N
P
P
----
E
Q
R
E
R
L
L
T
I
A
A
----
R
H
D
L
L
-
V
T
G
G
S
D
W
H
G
K
G
K
P
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
43
Fugue
61.25
24%
52
- C4 -
-
3E0F
-
?
A:
[9-294]
--------------------------------------------------------------------------------------------------------EPP
A
Q
G
W
D
I
H
C
H
T
V
F
-
S
--
D
G
T
E
T
----
P
R
T
L
V
E
Q
A
R
K
L
G
L
H
G
V
A
I
A
D
H
------------
D
T
T
A
G
--------
W
D
-------------
E
----------------
A
---
T
----
E
-------------------------
A
S
----
E
---
E
-
I
G
L
P
L
L
L
G
T
E
I
T
A
V
D
----------
E
D
V
S
V
H
M
L
-
A
F
Q
Y
D
-
P
--
S
N
-
E
H
I
S
S
M
F
A
N
T
--
R
A
A
R
L
R
-
R
T
K
R
M
V
E
R
L
S
Q
D
-
F
P
I
T
W
-
D
D
V
L
A
Q
-
V
K
-
E
-
G
E
R
T
T
I
G
R
P
H
I
A
D
A
L
V
A
A
G
V
Y
E
T
R
S
D
A
F
A
D
A
V
S
A
K
S
K
Y
Y
I
P
T
P
S
P
S
T
H
E
V
I
A
A
V
K
G
A
G
G
V
V
V
A
A
H
---
A
G
D
-
P
-
Q
R
---
N
-
R
-----------
R
-
L
-
L
S
D
E
----
Q
L
-
D
A
M
I
-
A
D
G
L
D
G
L
E
V
W
H
R
G
N
P
P
----
E
Q
R
E
R
L
L
T
I
A
A
----
R
H
D
L
L
-
V
T
G
G
S
D
W
H
G
K
G
-
K
P
N
G
L
G
E
N
L
T
D
D
D
T
V
R
E
I
L
C
R
G
V
DLIGR-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
26
HHSearch
47.33
24%
-2
- C4 -
-
2ANU
-
?
F:
[19-209]
-----------------------------------------------------------------------------------------------------------
W
L
L
C
D
F
H
V
H
T
N
M
-
S
--
D
G
H
L
P
----
L
G
E
V
V
D
L
F
G
K
H
G
V
D
V
V
S
I
T
D
H
------------
I
V
D
R
R
--------
T
L
-------------
E
QRKRNGEPLGAITEDK
F
QDY
L
KRLW
R
-------------------------
E
Q
KRAW
E
---
E
-
Y
G
M
I
L
I
P
G
V
E
I
T
N
N
T
------------
D
L
Y
H
-
I
V
A
V
D
V
K
-
E
--
Y
V
----------------------------------
D
----------------------------------------------------------
P
S
L
P
V
E
E
I
V
E
K
L
K
E
Q
N
A
L
V
I
A
A
H
---
P
D
R
K--------H
L
-----------
S
-
W
Y
L
W
A
N
----
M
E
-
R
F
-
K
--
D
T
F
D
A
W
E
I
A
N
R
D
D
L
-----------
F
N
S
V
G
----
V
K
K
Y
R
-
Y
V
A
N
S
D
F
H
E
L
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
24
HHSearch
44.86
19%
-9
- C4 -
-
3E38
1
?
A:
[18-198]
-----------------------------------------------------------------------------------------------------------
T
L
K
C
D
F
H
M
H
S
V
F
-
S
--
D
G
L
V
W
----
P
T
V
R
V
D
E
A
Y
R
D
G
L
D
A
I
S
L
T
E
H
------------
I
E
Y
R
P
--------
H
K
QDVVSDHN
R
S
F
D
-
L
----------------
C
---
R
----
E
-------------------------
Q
A
----
E
---
K
-
L
G
I
L
L
I
K
G
S
E
I
T
R
A
M
A
------------
P
G
H
-
F
N
A
I
F
L
S
-
D
--
S
N
-----------------------------------
P
--------------------------------------------------------
L
E
Q
K
D
Y
K
D
A
F
R
E
A
K
K
Q
G
A
F
M
F
W
N
H
---
P
G
W
D
S
-
Q
Q
PD-
T
-
T
-----------
K
-
W
-
W
-
P
E
----
H
T
-
A
L
-
Y
Q
E
G
C
M
H
G
I
E
V
A
N
G
H
L
Y
-------
M
P
E
A
I
Q
W
C
L
----
D
K
N
L
T
-
M
I
G
T
S
D
I
H
Q
P
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
25
HHSearch
44.27
19%
-10
- C4 -
-
3E38
2
?
B:
[18-198]
-----------------------------------------------------------------------------------------------------------
T
L
K
C
D
F
H
M
H
S
V
F
-
S
--
D
G
L
V
W
----
P
T
V
R
V
D
E
A
Y
R
D
G
L
D
A
I
S
L
T
E
H
------------
I
E
Y
R
P
--------
H
K
QDVVSDHN
R
S
F
D
-
L
----------------
C
---
R
----
E
-------------------------
Q
A
----
E
---
K
-
L
G
I
L
L
I
K
G
S
E
I
T
R
A
M
A
------------
P
G
H
-
F
N
A
I
F
L
S
-
D
--
S
N
-----------------------------------
P
--------------------------------------------------------
L
E
Q
K
D
Y
K
D
A
F
R
E
A
K
K
Q
G
A
F
M
F
W
N
H
---
P
G
W
D
S
-
Q
Q
PD-
T
-
T
-----------
K
-
W
-
W
-
P
E
----
H
T
-
A
L
-
Y
Q
E
G
C
M
H
G
I
E
V
A
N
G
H
L
Y
-------
M
P
E
A
I
Q
W
C
L
----
D
K
N
L
T
-
M
I
G
T
S
D
I
H
Q
P
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
9
PsiBlast_PDB
43.36
25%
-35
- C4 -
-
3E38
1
?
A:
[22-114]
---------------------------------------------------------------------------------------------------------------
D
F
H
M
H
S
V
F
-
S
--
D
G
L
V
W
----
P
T
V
R
V
D
E
A
Y
R
D
G
L
D
A
I
S
L
T
E
H
IEYRPHKQDVVS
D
H
N
R
S
--------
F
D
-------------
L
----------------
C
---
R
----
E
-------------------------
Q
A
----
E
---
K
-
L
G
I
L
L
I
K
G
S
E
I
--------
T
R
----
A
M
A
P
G
H
-
F
N
A
I
F
L
S
-
D
--
S
N
-
P
L
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
31
HHSearch
42.48
22%
-5
* C4 *
-
3B0X
-
?
A:
[336-533]
-----------------------------------------------------------------------------------------------------------
Q
V
K
G
D
L
Q
V
H
S
T
Y
-
S
--
D
G
Q
N
T
----
L
E
E
L
W
E
A
A
K
T
M
G
Y
R
Y
L
A
V
T
D
H
------------
S
P
A
V
R
--------
V
A
GGPS
P
E
E
A
L
K
R
V
G
E
----------------
I
---
R
----
R
-------------------------
F
N
----
E
---
T
H
G
P
P
Y
L
L
A
G
A
E
V
D
I
H
P
D
-------------
G
T
-
L
D
Y
-
P
D
W
-
V
--
L
R
----------------------------
E
---
L
-
D
L
V
L
-------------------
V
S
V
H
S
---------------
R
----
F
N
-----
L
--
P
K
A
D
Q
T
K
R
L
L
K
A
-
L
E
N
P
F
V
H
V
L
A
H
---
P
T
A
R
L
-
L
G
RRA
P
-
I
-----------
E
A
D
-
W
E
A
V
----
F
Q
-
K
A
-
K
-
E
-
K
G
V
A
V
E
I
D
G
Y
Y
D
R
M
----
D
L
P
D
D
L
A
R
M
A
Y
----
G
M
G
L
W
-
I
S
L
S
T
D
A
H
Q
T
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
19
PsiBlast_PDB
38.90
26%
-24
- C4 -
-
2ANU
-
?
A:
[23-155]
---------------------------------------------------------------------------------------------------------------
D
F
H
V
H
T
N
M
-
S
--
D
G
H
L
P
L
G
E
V
V
D
L
F
G
K
H
G
V
D
V
V
S
I
T
D
H
I
V
D
R
------------
R
T
L
E
----------
Q
-------------
R
----------------
K
---
R
----
N
GEPLGAITEDK
F
Q
D
Y
L
K
R
L
W
R
E
Q
K
R
A
W
----
E
---
E
-
Y
G
M
I
L
I
P
G
V
E
I
--------
T
N
----
N
T
D
L
Y
H
-
I
V
A
V
D
V
K
-
E
--
Y
V
D
P
S
L
P
V
-
E
E
I
V
--
E
K
L
K
E
Q
-
N
A
L
V
-
I
A
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
18
PsiBlast_PDB
38.86
28%
-130
- C5 -
-
5NUG
-
?
A:
[1606-1933]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
D
L
L
G
K
I
Q
K
A
L
G
E
Y
L
E
R
E
R
S
S
F
P
R
F
Y
F
V
G
D
E
D
L
L
E
I
I
G
N
S
K
N
V
A
K
L
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
33
HHSearch
38.82
22%
-7
- C4 -
-
4GX8
-
DPO3A_ECOLI (first)
B:
[49-147]
-----------------------------------------------------------------------------------------------------------
P
R
F
V
H
L
R
V
H
S
D
Y
-
S
M
I
D
G
P
A
K
----
T
A
P
L
V
K
K
A
A
A
L
G
M
P
A
L
A
I
T
D
F
------------
T
N
L
C
G
--------
L
V
-------------
K
----------------
F
---
Y
----
G
-------------------------
A
G
----
H
---
G
-
A
G
I
K
P
I
V
G
A
D
F
N
V
Q
C
D
L
L
G
-------
D
E
L
T
H
-
L
T
V
L
A
A
N
-
N
T
G
Y
Q
-
N
L
T
L
L
-
I
S
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
50
Fugue
38.77
16%
22
- C4 -
-
3F2B
3
?
A:
[7-1030]
VRRLETIVEEER
R
V
V
V
Q
G
Y
V
F
D
A
E
V
S
E
L
KSG
R
T
L
L
T
M
K
I
T
DYT
N
S
I
L
V
K
M
F
S
RD
K
E
D
A
E
L
M
S
G
VKKG
M
W
V
K
V
R
G
S
V
Q
NDTFVR
D
L
V
I
IAN
D
L
N
E
I
A
ANERQDTAPEG
E
K
R
V
E
L
H
L
H
T
P
M
-
S
QM
D
A
V
T
S
----
V
T
K
L
I
E
Q
A
K
K
W
G
H
P
A
I
A
V
T
D
H
------------
A
V
V
Q
S
--------
F
P
-------------
E
----------------
A
---
Y
----
S
-------------------------
A
A
----
K
---
K
-
H
G
M
K
V
I
Y
G
L
E
A
N
I
V
------
D
----
D
P
F
H
V
T
-
L
L
A
Q
N
E
T
-
G
--
L
K
-
N
L
F
K
L
-
V
S
L
S
H
I
Q
Y
F
H
R
V
-
P
R
I
P
-
R
S
V
L
V
K
H
R
D
G
L
L
V
-
G
S
G
C
D
K
G
E
L
-
F
-
D
N
V
E
D
I
A
R
F
Y
---
D
F
L
E
V
H
P
P
D
V
Y
K
P
L
Y
V
K
D
E
E
M
I
K
N
I
I
R
S
I
V
A
L
G
E
K
L
D
I
P
V
V
A
T
G
N
-----
V
H
---
Y
L
N
---
P
E
---
D
-
K
-----------
I
-
Y
-
R
K
I
L
----
I
H
-
S
Q
-
G
-
G
A
N
P
L
N
R
H
E
L
P
D
V
Y
F
R
----
T
T
N
E
M
L
D
C
F
S
F
LG
P
E
K
A
K
E
I
-
V
V
D
N
T
Q
K
I
A
S
L
I
G
D
V
K
P
I
K
D
E
L
Y
T
P
R
I
E
G
A
D
E
E
I
R
E
M
S
Y
R
R
A
K
E
I
YGDPLP
K
L
V
E
E
R
L
E
K
E
L
K
S
I
I
G
H
GF
A
V
I
Y
L
I
S
H
K
L
V
K
K
S
L
D
D
G
Y
L
V
G
S
R
G
SVGSS
F
V
A
T
M
T
EITEVNPL
P
P
H
Y
V
C
PNCK
H
S
E
F
F
NDGSVGSGFDLPDKNCPRCG
T
K
Y
K
K
D
G
HDIPFETFLGFKGD
K
V
P
D
I
D
L
N
F
SGEY
Q
P
R
A
H
N
Y
T
K
V
L
FGEDNVYR
A
G
T
I
G
T
VA
D
K
T
A
Y
G
F
V
K
A
Y
A
S
D
H
NLELR
G
A
E
I
D
R
L
A
A
G
C
TGVKR
T
T
G
Q
HP
G
G
I
I
V
V
P
DYMEIYD
F
T
P
I
Q
Y
PADDTSSE
W
R
T
T
HFDFHSIHDN
L
L
K
L
DILGHD
D
P
T
V
I
R
M
L
Q
D
L
SGIDPKTIPTDD
P
D
V
M
G
I
F
S
STEPLGVTPEQIMCNVGTIGIPEFGT
R
F
V
R
Q
M
L
E
E
TRPKT
F
S
E
L
V
Q
I
S
G
L
S
H
GTDVWLGN
A
Q
E
L
I
Q
N
GTCTLSEVIGC
R
D
D
I
M
V
Y
L
I
Y
R
GLE
P
S
L
A
F
K
I
M
E
S
V
R
K
GKGLT
P
E
F
E
A
E
M
R
K
H
DVP
E
W
Y
I
D
S
C
K
K
IK
Y
M
F
P
K
A
H
A
A
A
Y
V
L
M
A
V
R
I
A
Y
F
K
V
HH
P
L
L
Y
Y
A
S
Y
F
T
VRAEDFD
L
D
A
M
I
K
G
S
A
A
I
R
K
R
I
E
E
I
N
A
K
GIQAT
A
K
E
K
S
L
L
T
V
L
E
V
A
L
E
M
C
E
R
G
F
S
F
K
N
IDLYRSQATEFVIDGN
S
L
I
P
P
FNAIPGLG
T
N
V
A
Q
A
I
V
R
A
R
E
E
GEFLS
K
E
D
L
Q
Q
R
G
KLS
K
T
L
L
E
Y
L
E
S
R
GCLDSLPDHNQLSLF
32
HHSearch
38.21
22%
-4
- C4 -
-
4GX8
-
DPO3A_ECOLI (first)
A:
[49-154]
-----------------------------------------------------------------------------------------------------------
P
R
F
V
H
L
R
V
H
S
D
Y
-
S
MI
D
G
P
A
K
----
T
A
P
L
V
K
K
A
A
A
L
G
M
P
A
L
A
I
T
D
F
------------
T
N
L
C
G
--------
L
V
-------------
K
----------------
F
---
Y
----
G
-------------------------
A
G
----
H
---
G
-
A
G
I
K
P
I
V
G
A
D
F
N
V
Q
C
D
L
L
G
-------
D
E
L
T
H
-
L
T
V
L
A
A
N
-
N
T
G
Y
Q
-
N
L
T
L
L
-
I
S
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
44
Fugue
36.78
18%
42
- C4 -
-
2ANU
-
?
A:
[17-244]
---------------------------------------------------------------------------------------------------------T
E
W
L
L
C
D
F
H
V
H
T
N
-M
S
--
D
G
H
L
P
----
L
G
E
V
V
D
L
F
G
K
H
G
V
D
V
V
S
I
T
D
H
------------
I
V
D
R
R
--------
T
L
-------------
E
----------------
Q
---
R
----
K
-------------------------
R
N
----
G
---
E
-
P
L
G
A
I
T
E
D
----------------------------
K
F
Q
-
D
--
Y
L
-
K
R
L
W
R
-
E
Q
K
R
--
A
W
E
E
Y
G
M
I
L
I
P
-
G
V
E
I
T
N
------------------------
N
T
D
L
Y
H
I
V
A
V
D
V
K
E
Y
V
D
P
S
L
P
---------------------
V
E
E
I
V
E
K
L
K
E
Q
N
A
L
V
I
A
A
H
---
P
D
R
-
K
-
K
L
-------------------
S
-
W
Y
L
W
----
A
N
M
E
R
-
F
-
K
D
T
F
D
A
W
E
I
A
N
-----------
R
D
D
L
F
N
S
V
G
----
V
K
K
Y
R
-
Y
V
A
N
S
D
F
H
E
L
W
H
V
Y
S
W
K
T
L
V
K
S
E
K
N
I
E
A
I
K
E
A
I
R
K
NTD
V
A
I
Y
L
M
R
K-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
30
HHSearch
36.70
18%
25
- C4 -
-
4GC3
-
HIS9_LACLA
A:
[3-232]
-----------------------------------------------------------------------------------------------------------
L
K
K
L
D
Y
H
F
H
S
H
F
-
S
A-
D
S
E
E
L
----
P
R
K
H
V
T
E
A
I
A
H
G
L
E
E
I
C
F
T
E
H
------------
R
D
F
Y
F
PGMDFSLN
L
P
-------------
E
----------------
Y
---
F
Q
E
I
-
N
-------------------------
Q
L
----
Q
A
E
F
K
-
D
K
I
K
I
K
I
G
L
E
M
G
I
D
L
R
F
K
S
E
I
N
Q
F
I
D
S
A
P
F
D
-
F
V
I
A
S
V
H
-
E
--
I
-------------------------------------------------------
G
--
D
-----
I
E
V
Y
D
---------
G
T
E
F
Y
L
-
Q
K
T
K
E
E
--
A
Q
R
E
Y
L
L
A
C
L
D
V
V
Q
N
F
E
N
Y
N
S
F
G
H
---
L
D
Y
V
A
R
Y
G
---
P
-
Y
TDKSIKFAEN
R
E
-
I
-
L
F
E
I
----
L
R
-
A
L
-
A
-
S
K
-
E
K
A
L
E
I
N
T
R
L
F
D
D
P
K
T
E
Q
F
Y
S
D
L
L
I
N
F
K
----
R
L
G
G
K
F
I
T
L
G
T
D
S
H
I
A
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------