@TOME V2.3
(Mar 2018)
Ref.
-
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Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
Show Ligands of Templates
Complexes Affinity Score
Main Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Complexes Tab
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : B0VRI0: (2017-12-03 )
MKTHKSLMVSCLSVLSITLFVQHAQAAAAFDPNGSWMLGDWNGQRTALQAQGYDFSFGYTGEYAGILDSKQTSTHGSAYTGQLALGSHLDLGKILGWQDTEAQITLTYRDGQSLSEHSPALAGHQSSVQEVWGREQTWRLTDLWIKKKFLDQKLDVKVGRFGEGEDFNSFDCDFQNLALCGSQVGNWVGDQWYNWPVSQWAMRVKYNLQPDLYTQVGVYEYNPENLERGKGFNLSTDGSHGAIIPAEVVWSPKLGVQSMPGEYRLGYYYSTADAKEIADSTKTSHKQGVWVTAKQKLFQPADQADRGLTGFVNLTFHDSDTNKVDNMQNIGLVYKGLLNQRPQDELALGVARIHINDDWNDVQAKEYDTEYNTELYYGIHATNWLTIRPNVQYVRHVGALKNGDNTWVGGIKFSTAF
Atome Classification :
(20 SA)
----------------------------------------.........10--------........20....----....30-......-..40........50........60.----.......70........80......----..90---........100----.......110...--..--.-.----120.......130.......140.-......150.......160.......170...---....180....--...190..-...-----------..200...----....-210-.....-..220....----...230.-..--------------...----.240-...-.-...250-.....-...260.-......270--------.......-------------280----.-------------......290.....-..300.....--..---310.......--320......--.330..---------.-.....340..-.....350....---...360----...-----------------.--....---------.-----------------370--------..-...-...380.......-------390---------...----------.....------.400-..-----......410.....------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
(Atome)
(Ident)
(Tito)
(Num)
(QMean)
(Ligand)
(Uniprot)
----------------------------------------MK
T
H
K
S
L
M
V
S
C
--------
L
S
V
L
S
I
T
L
F
V
Q
HA
Q
----
A
A
A
A
FD-PNG
S
W
M
-
L
GDWNGQ
R
T
A
L
Q
AQGY
D
F
S
F
GYTGE----YAGILDSKQTSTHGS
A
Y
T
G
Q
L
ALGS----HL
D
L
---
G
K
ILGWQDT
E
A
----
Q
I
T
L
T
YRDGQSLS--EH--S-P----ALAG
H
Q
S
S
V
Q
E
V
WGREQ
T
W
R
L
T
D
L
-
W
I
K
K
K
F
LDQKLDVKVGRFGEGEDFNSFD
C
D
F
Q
---
N
L
A
L
C
G
S
Q
V
G
N
--WVGDQWYN-W
P
V
-----------
S
Q
W
A
M
R
V
K
----
Y
NLQ-PD
L
-
Y
T
Q
V
G
-
V
Y
EY
N
P
E
NL----ERGKGFN-LS--------------TDG----SHG
A
-
I
I
P
-
A
-
E
V
V
WS--PKLGV-QSMPGE
Y
-
R
L
G
Y
Y
Y
STA--------
D
A
K
E
I
A
D
-------------STK----T-------------SHKQ
G
V
W
V
T
A
K
Q
K
L-FQPADQADRG--L
T
---
G
F
V
N
L
T
FHDS--DTNKVD
N
M
Q
--
N
I
-
G
L
V
---------
Y
-
K
G
L
LNQR
P
Q
D
-
E
L
A
L
G
V
A
R
I
H
IN---DDWN------DV
Q
-----------------
A
--
K
EYD---------T-----------------EY---------N
T
-
E
L
Y
-
Y
G
I
HA
T
N
W
L
T
IRP-------
N
-----------
V
Q
Y
----------
V
R
H
V
G
------ALK--NG-----DN
T
W
VG
G
I
K
F
STAF------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
18
Fugue
81.49
55%
23
* C6 *
-
4GEY
13
?
A:
[17-436]
--------------------------------------------------------------------------------
E
A
F
-
S
S
E
S
K
W
M
T
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W
G
G
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D
K
G
Y
D
F
T
L
D
Y
V
G
E
----
V
A
G
N
L
H
G
G
Y
N
D
D
K
T
A
R
Y
S
D
Q
F
A
L
G
A
----
H
L
D
L
---
Q
K
I
L
G
W
H
D
A
E
F
----
K
L
A
I
T
E
R
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G
R
N
L
S
--
N
D
--
R
-
I
SD--
P
R
A
G
Q
F
S
S
V
Q
E
V
W
G
R
G
Q
T
W
R
L
T
-
Q
M
W
I
K
Q
K
Y
F
D
G
A
L
D
V
K
F
G
R
F
G
E
G
E
D
F
N
S
F
P
C
D
F
Q
---
N
L
A
F
C
G
S
Q
V
G
N
--
W
V
G
G
I
W
Y
N
-
W
P
V
-----------
S
Q
W
A
L
R
V
K
----
Y
N
I
T
-
P
A
F
-
F
V
Q
V
G
-
A
F
E
Q
N
P
S
N
L
----
E
T
G
N
G
F
K
-
L
S
--------------
G
S
G
----
T
K
G
---
A
I
M
P
M
E
A
V
W
S
--
P
K
V
N
---
G
L
P
G
E
Y
-
R
L
G
Y
Y
Y
S
T
A
--------
K
A
D
D
V
Y
D
DVNGNPQALTGEA
F
K
S
----
H
-------------
S
S
K
H
G
W
W
V
V
A
Q
Q
Q
V
-
T
A
H
G
G
D
V
N
R
G
--
L
S
---
L
F
A
N
F
T
V
H
D
K
--
A
T
N
V
V
D
N
Y
Q
--
Q
V
-
G
L
V
---------
Y
-
K
G
A
F
D
A
R
P
K
D
-
D
I
G
F
G
V
A
R
I
H
V
N
---
D
D
V
K
------
K
R
A
-----------------
E
--
L
L
N
A
---------
Q
S
GINDYDNPG
F
V
P
L
Q
R
T
E
Y
---------
N
A
-
E
L
Y
-
Y
G
F
H
V
T
N
W
L
T
V
R
P
-------
N
-----------
L
Q
Y
----------
I
K
S
P
G
------
G
V
D
--
E
V
-----
D
N
A
L
V
A
G
L
K
I
Q
S
S
F
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
4
HHSearch
80.14
56%
46
- C6 -
-
4GEY
13
?
A:
[19-436]
---------------------------------------------------------------------------------
F
S
-
S
E
S
K
W
M
-
T
G
D
W
G
G
T
R
T
E
L
L
D
K
G
Y
D
F
T
L
D
Y
V
G
E
----
V
A
G
N
L
H
G
G
Y
N
D
D
K
T
A
R
Y
S
D
Q
F
A
L
G
A
----
H
L
D
L
---
Q
K
I
L
G
W
H
D
A
E
F
----
K
L
A
I
T
E
R
S
G
R
N
L
S
--
N
D
R-
I
S
D
----
P
R
A
G
Q
F
S
S
V
Q
E
V
W
G
R
G
Q
T
W
R
L
T
Q
M
-
W
I
K
Q
K
Y
F
D
G
A
L
D
V
K
F
G
R
F
G
E
G
E
D
F
N
S
F
P
C
D
F
Q
---
N
L
A
F
C
G
S
Q
V
G
N
--
W
V
G
G
I
W
Y
N
-
W
P
V
-----------
S
Q
W
A
L
R
V
K
----
Y
N
I
T
-
P
A
F
-
F
V
Q
V
G
-
A
F
E
Q
N
P
S
N
L
----
E
T
G
N
G
F
K
-
L
S
--------------
G
S
G
----
T
K
G
A
-
I
M
P
-
M
-
E
A
V
W
S
--
P
K
V
N
G
---
L
P
G
E
Y
-
R
L
G
Y
Y
Y
S
T
A
--------
K
A
D
D
V
Y
D
DVNGNPQALTGEA
F
K
S
----
H
-------------
S
S
K
H
G
W
W
V
V
A
Q
Q
Q
V
-
T
A
H
G
G
D
V
N
R
G
--
L
S
---
L
F
A
N
F
T
V
H
D
K
--
A
T
N
V
V
D
N
Y
Q
--
Q
V
-
G
L
V
---------
Y
-
K
G
A
F
D
A
R
P
K
D
-
D
I
G
F
G
V
A
R
I
H
V
N
---
D
D
V
K
------
K
R
A
E
L
L
N
A
Q
S
GINDYDNPG
F
V
--
P
L
Q
R
---------
T
-----------------
E
Y
---------
N
A
-
E
L
Y
-
Y
G
F
H
V
T
N
W
L
T
V
R
P
-------
N
-----------
L
Q
Y
----------
I
K
S
P
G
------
G
V
D
--
E
V
-----
D
N
A
L
V
A
G
L
K
I
Q
S
S
F
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
1
PsiBlast_PDB
78.75
52%
50
- C6 -
-
4GEY
13
?
A:
[17-436]
-------------------------------------------------------------------------------
E
A
F
S
-
S
E
S
K
W
M
-
T
G
D
W
G
G
T
R
T
E
L
L
D
K
G
Y
D
F
T
L
D
Y
V
G
E
----
V
A
G
N
L
H
G
G
Y
N
D
D
K
T
A
R
Y
S
D
Q
F
A
L
G
A
----
H
L
D
L
---
Q
K
I
L
G
W
H
D
A
E
F
----
K
L
A
I
T
E
R
S
G
R
N
L
S
--
N
D
RI
S
-
D
----
P
R
A
G
Q
F
S
S
V
Q
E
V
W
G
R
G
Q
T
W
R
L
T
Q
M
-
W
I
K
Q
K
Y
F
D
G
A
L
D
V
K
F
G
R
F
G
E
G
E
D
F
N
S
F
P
C
D
F
Q
---
N
L
A
F
C
G
S
Q
V
G
N
--
W
V
G
G
I
W
Y
N
-
W
P
V
-----------
S
Q
W
A
L
R
V
K
----
Y
N
I
T
-
P
A
F
-
F
V
Q
V
G
-
A
F
E
Q
N
P
S
N
L
----
E
T
G
N
G
F
K
-
L
S
--------------
G
S
G
----
T
K
G
A
-
I
M
P
-
M
-
E
A
V
W
S
--
P
K
--
V
-
N
G
L
P
G
E
Y
-
R
L
G
Y
Y
Y
S
T
A
--------
K
A
D
D
V
Y
D
-------------
D
V
N
----
G
NPQALTGEAFKSH
S
S
K
H
G
W
W
V
V
A
Q
Q
Q
V
-
T
A
H
G
G
D
V
N
R
G
--
L
S
---
L
F
A
N
F
T
V
H
D
K
--
A
T
N
V
V
D
N
Y
Q
--
Q
V
-
G
L
V
---------
Y
-
K
G
A
F
D
A
R
P
K
D
-
D
I
G
F
G
V
A
R
I
H
V
N
---
D
D
V
K
K
R
A
E
L
L
N
A
Q
-----------------
S
GI
N
D
Y
D
NPG
F
V
P
L
Q
R
T
-----------------
E
Y
---------
N
A
-
E
L
Y
-
Y
G
F
H
V
T
N
W
L
T
V
R
P
-------
N
-----------
L
Q
Y
----------
I
K
S
P
G
------
G
V
D
--
E
V
-----
D
N
A
L
V
A
G
L
K
I
Q
S
S
F
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
26
Fugue
40.27
16%
-4
- C8 -
-
5CGZ
9
GALB_PSEPK
A:
[1-240]
-------------------------------------------------------------------------------------------------------------------------------
M
K
S
A
L
V
V
S
A
H
S
A
D
F
V
W
R
A
----
G
G
A
I
---
A
L
H
A
E
Q
G
Y
A
M
H
----
V
V
C
L
S
F
G
E
R
G
E
S
A
--
K
L
--
W
-
R
----
K
G
E
M
T
E
A
K
V
K
D
A
R
R
E
E
A
M
A
A
A
E
I
L
-
G
A
S
V
E
F
F
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I
G
-
D
Y
P
M
-
R
A
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K
D
T
L
F
R
L
A
D
V
Y
R
R
V
QP
E
F
V
L
S
H
S
L
K
D
P
--
Y
N
Y
D
H
P
L
A
-
M
H
L
-----------
A
Q
E
A
R
I
I
A
Q
AEG
Y
K
P
G
-
E
K
I
-
V
G
A
P
P
-
V
Y
A
F
E
P
H
Q
P
----
E
Q
---
C
E
-
W
R
--------------
P
D
--------
T
-
F
L
D
-
I
-
T
S
V
W
D
--
K
K
Y
A
A
I
Q
C
M
A
G
Q
E
-
H
L
W
E
Y
Y
T
R
V
--------
A
L
Q
R
G
V
Q
-------------
A
K
R
N
V
GI
T
-------------
S
A
R
N
I
V
Y
A
E
G
L
Q
S
V
-
F
P
R
V
T
E
N
L
A
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
25
Fugue
38.13
14%
37
* C8 *
-
3PM6
-
ALF_COCIM
A:
[10-302]
-----------------------------------------------------------
L
K
S
N
R
A
L
P
L
L
T
F
A
R
T
H
SF
A
I
P
A
I
C
-
V
Y
N
L
E
G
-
I
L
A
I
I
R
A
A
E
H
K
R
S
P
A
M
I
L
L
F
P
W
A
I
Q
----
Y
A
D
S
L
L
V
R
T
A
A
S
A
C
R
A
A
S
V
P
I
T
L
------
H
L
D
H
---
A
Q
------------------------------------------------------------------
D
P
E
I
I
K
R
A
A
D
L
S
P
G
-------
F
D
S
I
M
V
D
M
S
---
H
F
--------------
S
K
E
E
N
-
L
R
L
-----------
T
R
E
L
V
A
Y
C
----
N
A
R
G
-
I
A
T
-
E
A
E
P
G
-
R
I
E
G
G
E
D
G
V
----
Q
D
T
V
D
L
E
G
V
L
--------------
T
T
------------
P
-
E
-
E
S
E
E
F
--
V
A
T
G
I
-
N
W
L
---------------------------
A
P
-------------
A
F
G
----
N
-------------
V
H
--
G
N
Y
G
P
R
G
V
Q
L
D
Y
E
R
L
Q
R
I
N
E
A
--
V
G
---
E
R
V
G
L
V
L
H
G
A
--
D
----------------------------
P
F
T
K
E
I
F
E
K
-
C
I
E
R
G
V
A
K
V
N
V
N
---
R
A
V
N
------
N
E
Y
-----------------
V
--
K
V
M
R
---------
E
-----------------
K
A
---------
G
S
-
L
P
I
-
T
R
L
H
E
E
V
T
N
A
M
Q
A
-------
A
-----------
V
E
K
----------
I
M
D
M
-----------------------
I
D
S
T
G
K
A
E
F
M
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
23
Fugue
36.84
17%
42
- C4 -
-
4P0D
-
TEE6_STRP6
A:
[1-483]
----------------------------------------
S
L
S
D
D
T
A
Q
L
K
I
T
NIEGG
P
T
V
T
L
Y
K
I
G
E
G
V
Y
N
G
D
----
S
F
I
N
F
K
-
Y
A
E
G
V
S
-
L
T
E
T
G
P
T
S
Q
E
I
T
T
I
A
N
G
I
N
T
G
K
I
K
P
----
F
-----
S
T
E
N
V
S
I
S
N
G
T
A
T
Y
N
A
R
G
A
----
S
V
Y
I
---
A
L
L
T
G
A
T
D
G
R
T
Y
N
P
I
L
L
A
A
S
Y
N
G
E
G
N
L
V
--
T
K
--
N
-
Y
---------------
L
Y
G
Q
T
S
V
A
K
S
S
L
P
-
S
I
T
K
K
V
T
G
T
I
D
D
V
N
K
K
T
T
S
L
G
S
V
L
-
S
Y
S
L
T
F
E
---
L
P
S
Y
T
K
E
A
V
N
K
T
V
Y
V
S
D
N
M
S
E
G
L
T
F
-----------
N
F
N
S
L
T
V
E
----
W
K
G
K
-
M
A
N
-
I
T
E
D
G
-
S
V
M
V
E
N
T
K
I
G
I
A
K
E
V
N
N
G
F
N
-
L
S
F
IYD----------
S
L
E
----
S
I
S
P
-
N
I
S
-
Y
-
K
A
V
V
N
--
N
K
A
I
V
-
G
G
E
G
N
P
N
-
K
A
E
F
F
Y
S
N
N
PTKGNTYD
N
L
D
K
K
P
D
-------------
K
G
I
----
T
-------------
S
K
E
D
S
K
I
V
Y
T
Y
Q
I
A
-
F
R
K
V
D
S
V
S
K
T
--
P
L
---
I
G
A
I
F
G
V
Y
D
T
--
S
N
K
L
I
D
I
V
T
T
N
K
N
-
G
Y
A
I
S
T
Q
V
S
S
G
K
Y
-
K
I
K
E
L
K
A
P
K
G
Y
S
L
N
T
E
T
Y
E
I
T
A
N
---
W
V
T
A
------
T
V
K
-----------------
T
--
S
A
K
S
---------
T
-----------------
T
Y
T
SDKNKATD
N
S
-
E
Q
V
-
G
W
L
K
N
G
I
F
Y
S
I
D
S
R
P
T
G
ND
V
K
-----------
E
A
Y
----------
I
E
S
T
K
------
A
L
T
--
D
G
T
T
F
S
K
S
N
E
G
S
G
T
V
L
L
E
T
D
I
P
N
T
K
LG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
19
Fugue
35.54
15%
25
* C7 *
-
3P0S
-
?
A:
[43-454]
--------------------------------------------------------------------------------
A
N
D
-
G
R
Q
D
I
F
-
S
G
A
P
Q
P
N
Q
H
H
T
L
V
Y
G
K
S
Y
H
F
T
I
T
-------
N
G
L
P
E
F
R
H
L
A
T
T
N
S
G
Y
Y
A
Q
Q
R
F
-
K
----
H
I
H
G
I
PW
E
R
L
L
M
Y
V
-
S
E
G
----
E
L
L
R
M
F
R
D
Y
T
S
L
K
--
V
E
--
E
-
V
----
V
C
E
V
Y
S
L
G
V
R
L
P
F
V
T
S
A
T
---------
T
S
S
V
A
N
A
N
A
Q
Y
P
I
G
C
F
----
H
F
D
E
A
Y
E
T
N
Y
---
G
I
N
N
V
A
D
I
I
N
K
--
A
L
G
T
E
W
K
N
-
A
T
R
-----------
P
T
A
A
V
T
T
A
----
W
S
E
Q
F
P
N
I
S
A
S
S
T
S
-
R
D
I
N
N
P
V
I
V
----
D
Y
S
L
P
Y
F
-
E
N
N
V
P
K
DVGIYD
Y
V
D
I
K
N
G
----
T
T
A
Y
-
G
K
C
-
W
-
E
K
R
F
K
--
P
T
N
G
L
-
L
Y
A
E
S
T
L
-
K
G
N
V
V
T
P
L
A
--------
A
Q
P
T
N
I
M
-------------
T
P
I
----
P
-------------
G
L
E
N
G
Y
F
M
S
N
D
Q
I
R
-
E
R
R
D
L
T
T
S
V
P
--
P
V
---
A
L
T
A
T
K
L
N
Q
S
--
A
S
N
N
L
N
A
F
V
--
D
Y
M
G
Y
N
---------
Y
-
F
G
E
Q
K
C
A
P
Q
S
-
M
P
K
F
M
I
G
F
V
N
I
R
---
N
E
D
N
------
S
L
L
-----------------
N
--
A
K
W
D
---------
I
-----------------
L
I
---------
K
T
-
R
I
R
L
T
G
L
Q
S
T
R
E
W
V
A
R
T
-------
D
RIPPQYFT
S
Q
Y
T
Q
F
RYPNINETPL
L
R
S
L
G
------
T
F
K
--
L
P
-----
T
K
--
R
P
G
M
D
S
R
I
A
A
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
21
Fugue
34.03
21%
-
- C- -
-
4W7G
-
?
A:
[44-394]
--------------------------------------------------
R
--------
L
P
E
K
N
I
I
L
L
G
G
T
V
D
----
S
Q
R
E
F
F
-
E
A
L
S
---------------
S
N
D
R
R
F
A
L
G
Y
T
------
Y
Y
D
V
L
D
A
D
H
---------------------------------
E
D
T
L
A
----
R
I
S
I
Y
T
L
-----
T
--
D
P
--
S
-
P
----
A
F
A
S
L
L
Q
P
I
-----------
L
T
P
D
-
S
I
P
N
T
L
I
V
I
L
L
D
W
----------------------------
S
Q
P
W
K
--
W
M
-
R
Q
L
R
E
-
W
I
L
-----------
L
L
R
T
V
L
V
S
----
L
S
H
E
-
C
K
A
-
T
M
E
E
V
-
M
L
S
W
R
--------
D
R
G
R
G
G
G
-
I
N
--------------
L
D
G
----
S
M
-------------
T
--
L
P
L
G
-----
P
G
E
W
-
E
D
G
L
G
L
P
L
C
--------
V
V
C
Q
N
A
E
-------------
K
M
E
----
Y
-------------
L
E
K
T
Q
G
W
---
K
E
E
E
-
F
D
V
V
L
Q
F
M
R
T
--
V
L
L
K
H
G
A
S
L
I
Y
T
T
P
S
--
V
P
S
Q
L
P
S
L
I
--
H
S
-
S
L
G
---------
I
-
H
S
L
L
K
K
Q
P
L
K
-
H
N
V
I
E
R
D
K
I
V
V
P
P
NW
D
S
W
G
------
K
I
R
-----------------
V
LR
E
G
F
D
---------
V
-----------------
E
R
---------
V
S
-
N
G
W
-
S
V
D
L
D
Q
P
Y
P
L
P
D
P
-------
E
-----------
G
S
T
----------
V
V
L
Y
E
------
E
A
V
--
Q
D
-----
P
T
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
5
HHSearch
31.00
8%
-25
- C6 -
-
4RJW
1
PORO_PSEAE
A:
[378-429]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
T
---------
K
-----------------
A
K
---------
A
H
-
N
L
G
-
V
N
W
Y
V
N
D
A
V
K
I
S
A
-------
A
-----------
Y
V
K
----------
A
K
T
D
K
------
I
T
N
NN
G
D
-----
D
D
G
D
G
F
V
T
R
L
Q
Y
V
F
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
7
HHSearch
30.10
9%
-23
- C6 -
-
4PR7
3
KDGM_DICD3
A:
[56-117]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
V
S
---------
N
-----------------
G
T
---------
E
V
-
V
A
S
-
Y
V
Y
K
F
N
S
V
F
S
I
E
P
-------
G
-----------
F
S
L
----------
E
S
G
S
S
------
N
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
27
Fugue
29.81
16%
53
- C7 -
-
4TN3
-
ENLYS_BPT4
A:
[27-400]
------------------------------------VDHC
A
R
H
G
E
K
L
L
L
F
C
--------
Q
E
--
D
S
K
V
I
C
W
L
C
K
----
D
S
Q
E
H
R
-
G
H
H
T
F
L
-
M
E
E
V
A
Q
E
Y
H
V
K
L
Q
T
A
L
E
M
L
R
Q
K
Q
Q
E
A
E
K
L
E
A
D
I
R
E
E
K
A
S
W
K
I
Q
I
D
Y
D
K
T
N
V
S
A
D
----
F
E
Q
L
---
R
E
I
L
D
W
E
E
S
N
E
----
L
Q
N
L
E
K
E
E
E
D
I
L
K
S
L
T
K
--
S
-
E
----
T
E
M
V
Q
Q
T
Q
Y
M
R
E
L
I
S
E
L
E
H
R
L
Q
M
M
-
D
L
L
Q
G
V
D
G
I
I
K
R
I
E
N
M
T
L
F
R
A
P
D
L
K
G
M
L
D
M
F
R
---
D
A
A
A
E
E
S
P
V
----------------------------
L
L
A
M
N
I
F
----
E
M
L
R
-
I
D
E
-
G
L
R
L
K
-
I
Y
K
N
T
E
G
Y
Y
----
T
I
G
I
G
H
L
-
L
T
--------------
K
S
P
----
S
----
L
N
A
-
A
-
K
S
E
L
D
--
K
A
I
G
R
-
N
T
--------
N
G
V
I
T
K
D
--------
E
A
E
K
L
F
N
-------------
Q
D
V
----
D
-------------
A
A
V
R
G
I
L
R
N
A
K
L
K
P
-
V
Y
D
S
L
D
A
V
R
---
R
A
---
A
L
I
N
M
V
F
Q
M
G
--
E
T
G
V
A
G
F
T
N
--
S
L
-
R
M
L
---------
Q
------
Q
K
R
W
D
-
E
A
A
V
N
L
A
K
----------------------------------------------------------------------------------------------
S
R
W
Y
N
Q
T
P
-------
N
------------
R
A
----------
K
R
V
I
T
------
T
F
R
--
T
G
-------
T
W
D
---
A
Y
K
N
L
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2
PsiBlast_PDB
29.47
25%
17
- C6 -
-
5K6P
-
A:
[4-117]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
S
-
E
D
V
W
----
E
I
L
R
-
Q
A
P
P
S
E
Y
E
R
I
A
F
Q
Y
G
V
T
--------
D
L
R
G
M
L
K
-------------
R
L
K
----
G
-------------
M
R
R
D
E
K
K
S
T
A
F
Q
K
K
-
L
E
P
A
Y
Q
V
S
K
G
H
K
I
R
---
L
T
V
E
L
A
D
H
D
A
--
E
V
K
W
L
K
N
G
Q
--
E
I
-
Q
M
S
---------
G
-
S
K
Y
I
F
E
S
I
G
A
-
K
R
T
L
T
I
S
Q
C
S
L
A
---
D
D
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
13
HHSearch
29.25
11%
-63
- C6 -
-
1Q9G
-
OMPX_ECOLI
A:
[103-146]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
S
D
---------
Y
-----------------
G
F
---------
S
Y
-
G
A
G
-
L
Q
F
N
P
M
E
N
V
A
L
D
F
-------
S
-----------
Y
E
Q
----------
S
R
I
R
S
------
V
-----
D
-----
V
G
T
W
I
A
G
V
G
Y
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
3
PsiBlast_PDB
28.53
29%
23
- C6 -
-
5DL8
1
?
B:
[130-220]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
V
G
E
L
W
L
D
-
L
P
V
TAVDASRQLLT
S
Y
W
G
T
N
L
K
----
S
Q
L
S
-
D
Q
L
-
Y
A
E
I
G
R
V
E
K
V
S
P
R
N
E
----
E
D
F
K
K
F
S
-
F
T
--------------
A
N
G
ITKE
S
D
G
L
N
Y
I
D
-
L
-
R
Y
Q
F
T
--
P
------
S
L
K
G
E
Y
-
Y
F
G
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
24
Fugue
27.91
18%
45
- C1 -
-
4WRT
-
?
A:
[14-730]
S
M
D
T
F
I
T
R
N
F
Q
T
T
I
I
Q
K
A
K
N
T
M
A
E
F
SEDPELQ
P
A
M
L
F
N
I
C
V
H
L
E
V
C
Y
V
I
S
D
--------
M
N
F
L
D
E
E
G
K
A
Y
T
A
N
----
L
R
P
Q
Y
E
V
I
E
G
M
P
R
-
T
I
A
W
M
V
Q
R
S
L
A
Q
E
H
G
I
E
----
T
P
K
Y
----
L
A
D
L
F
D
Y
K
T
K
R
F
I
E
V
G
I
T
K
G
L
A
D
D
Y
----
F
W
K
K
---
K
E
K
L
G
--
N
S
M
E
----
L
M
I
F
S
Y
N
Q
D
Y
S
L
S
--
N
E
--
S
-
S
LD
E
E
G
K
G
R
V
L
S
R
L
T
E
L
Q
A
E
L
S
L
K
N
L
W
Q
V
-
L
I
G
E
E
D
V
E
K
G
I
D
F
K
L
G
Q
T
I
S
R
L
R
D
I
S
V
P
A
G
F
S
---
N
F
E
G
M
R
S
Y
I
D
N
------------
I
D
-----------
P
K
G
A
I
E
R
N
----
L
A
R
M
-
S
P
L
-
V
S
-
V
T
-
P
K
K
L
T
W
E
D
L
-----
R
P
I
G
P
H
-
I
Y
--------------
N
H
E
----
L
P
E
V
-
P
Y
N
-
A
-
F
L
L
M
S
--
D
E
L
G
L
-
A
N
M
T
E
G
K
-
S
K
K
---
P
K
T
--------
L
A
K
E
C
L
E
-------------
K
Y
S
----
T
-------------
L
R
D
Q
T
D
P
I
L
I
M
K
S
E
-
K
A
N
E
N
F
L
W
K
L
--
W
R
---
D
C
V
N
T
I
S
N
E
E
--
M
S
N
E
L
Q
K
T
N
--
Y
A
-
K
W
A
---------
T
G
D
G
L
T
Y
Q
K
I
M
K
-
E
V
A
I
D
D
E
T
M
C
Q
E
---
E
P
K
I
------
P
N
K
C
R
V
--------------
A
--
A
W
V
Q
---------
T
-----------------
E
M
---------
N
L
L
S
T
L
-
T
S
K
R
A
L
D
L
P
E
I
G
P
-------
D
-----------
V
A
P
----------
V
E
H
V
G
------
S
E
R
--
R
-------
K
Y
F
V
N
E
I
N
Y
C
K
A
S
T
V
M
M
K
Y
V
L
F
H
T
S
L
L
N
E
S
N
A
S
M
G
K
Y
K
V
I
P
I
T
N
R
V
V
N
EKG
E
S
F
D
M
L
Y
G
L
A
V
K
G
QSHLRGDT
D
V
V
T
V
V
T
F
E
F
S
STDPRVDSGKWPK
Y
T
V
F
R
I
GSLFVSG
R
E
K
S
V
Y
L
Y
C
R
VNGTN
K
I
Q
M
K
W
G
M
E
ARR
C
L
L
Q
S
M
Q
Q
M
E
A
I
V
E
Q
E
S
S
I
Q
GYDM
T
K
A
C
F
KGDRVNSPKTFSIGTQEG
K
L
V
K
G
S
F
G
K
A
L
R
V
I
F
T
K
C
L
M
H
Y
V
F
GN
A
Q
L
E
G
F
S
A
E
S
R
R
L
L
L
L
I
Q
A
L
K
D
RKGPWVFD
L
E
G
M
Y
S
G
I
E
E
C
ISNN
P
W
V
I
Q
S
A
Y
W
F
N
E
W
L
G
F
E
K
E
G
S
K
V
6
HHSearch
27.57
9%
-31
- C6 -
-
4FQE
2
KDGM_DICD3
A:
[56-117]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
V
S
---------
N
-----------------
G
T
---------
E
V
-
V
A
S
-
Y
V
Y
K
F
N
S
V
F
S
I
E
P
-------
G
-----------
F
S
L
----------
E
S
G
S
S
------
N
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
20
Fugue
26.67
18%
-
- C5 -
-
3EB8
-
VIRA_SHIFL
A:
[53-399]
--------------------------------------A
E
K
H
S
E
K
K
L
M
D
S
F
--------
S
P
S
L
S
Q
D
K
M
-----------------
D
G
E
F
A
-
H
A
N
I
D
G
I
S
I
R
L
C
L
N
K
G
I
C
S
V
F
Y
L
D
----------
G
D
K
I
Q
S
T
Q
L
S
S
K
E
Y
N
N
L
L
S
S
LPPK
Q
F
N
L
---
G
K
V
H
-------------
T
I
T
A
P
V
S
G
N
F
K
--
T
H
--
K
-
P
----
A
---------------------------
P
E
V
I
E
T
A
I
N
C
C
T
S
I
I
P
N
D
D
Y
F
H
V
K
D
T
D
F
N
---
S
-------------------------------------------------
V
W
-
H
D
I
-
Y
R
D
I
R
-
A
S
D
S
N
S
T
K
I
----
Y
F
N
------------------------------
N
I
-
E
I
P
-
L
-
K
L
I
A
D
L
I
N
E
L
G
I
-
N
E
F
I
D
S
K
-
K
E
L
Q
M
L
S
Y
N
--------
Q
V
N
K
I
I
N
-------------
S
N
-------------------
F
P
Q
Q
D
L
C
F
Q
T
E
K
L
L
-
F
T
S
L
F
Q
-
D
P
A
--
F
I
---
S
A
L
T
S
A
F
W
Q
S
LH
I
T
S
-----
S
--
S
V
-
E
H
I
---------
Y
-
A
Q
I
M
S
E
N
I
E
N
-
R
L
N
F
M
P
E
Q
R
V
I
N
---
N
C
G
H
------
I
I
K
-----------------
I
--
N
A
V
R
A
Y
-------
E
-----------------
V
S
---------
S
S
-
I
L
P
-
S
H
I
T
C
N
G
V
G
I
N
K
I
-------
E
-----------
T
S
Y
----------
L
V
H
A
G
TLPS
S
E
G
L
R
--
N
A
-----
I
P
P
E
S
R
Q
V
S
F
A
I
I
S
P
D----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
8
HHSearch
22.84
13%
-22
- C6 -
-
2N2M
-
?
A:
[111-155]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
S
K
---------
T
-----------------
S
L
---------
A
Y
-
G
A
G
-
L
Q
F
N
P
H
P
N
F
V
I
D
A
-------
S
-----------
Y
E
Y
----------
S
K
L
D
D
------
V
-----
K
-----
V
G
T
W
M
L
G
A
G
Y
R
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
14
HHSearch
22.25
11%
-25
- C6 -
-
1QJ8
2
OMPX_ECOLI
A:
[103-146]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
S
D
---------
Y
-----------------
G
F
---------
S
Y
-
G
A
G
-
L
Q
F
N
P
M
E
N
V
A
L
D
F
-------
S
-----------
Y
E
Q
----------
S
R
I
R
S
------
V
-----
D
-----
V
G
T
W
I
A
G
V
G
Y
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
15
HHSearch
19.27
10%
6
- C6 -
-
3QRA
3
?
A:
[112-142]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
S
K
---------
T
-----------------
S
L
---------
A
Y
-
G
A
G
-
L
Q
F
N
P
H
P
N
F
V
I
D
A
-------
S
-----------
Y
E
Y
----------
S
K
L
D
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------