@TOME V2.3
(Mar 2018)
Ref.
-
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Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
Show Ligands of Templates
Complexes Affinity Score
Main Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Complexes Tab
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : B0VS82: (2017-12-06 )
MVSFLFIGLVVTILLTPGPTNTLLASAGIQAGVKHSLKLIPAEVIGYLIAITSWGVLLESVSHFIPWLPAILKLMSAGFILYLAFKLWMTSSEDIKLDRPLITPKALFLATLLNPKALLFASAIFPHAAWEIPHLYFIHIVVFLSLITPIAFLWIMFGTVLISNKVTWLNQRNLQRIAAFILTFFAMPIGYSAISSF
Atome Classification :
(20 SA)
--------------------------------------------------------------------------------------------------....--------...-------..--10..---..----....---20........30........40....----....50.---...-....-----60..--..-....---70--....---....80........--------90.........-----100......--..-------------110.------......120.......130------...-----------....140.......150.......160.......170.....------..180.......190.....------------------------------------------------------------------------------------------------------------------------
(Atome)
(Ident)
(Tito)
(Num)
(QMean)
(Ligand)
(Uniprot)
--------------------------------------------------------------------------------------------------M
V
S
F
--------
L
F
I
-------
G
L
--
V
V
T
I
---
L
L----TPGP---T
N
T
L
L
A
S
A
G
I
Q
A
G
V
K
H
S
L
KL
I
P
A
E
V
I
----
G
Y
L
I
A
I
T
---
S
W
G
-
V
L
L
E
-----
S
V
S
H
--
F
I
-
P
W
L
P
---
A
I
--
L
K
L
M
---SA
G
F
I
L
Y
L
A
F
K
L
WM--------T-SSEDIKLDR-----PL-I
T
P
K
A
L
--
F
L
-------------
A
T
LL------N
P
K
A
L
L
F
A
S
A
IFPHAAWEI------
P
H
L
-----------
Y
F
I
H
I
V
V
F
L
S
L
I
T
P
I
A
F
L
W
I
M
F
G
T
V
L
ISN
K
V
T
W
L
N
Q
R
N
L
Q
R
I
------
A
A
F
I
L
T
F
F
A
MPI
G
Y
S
A
ISSF------------------------------------------------------------------------------------------------------------------------
7
PsiBlast_PDB
88.25
29%
0
- C- -
-
5TCH
2
?
A:
[69-195]
-------------------------------------------------------------------------------------------------------------------------------------------
G
P
---
T
I
A
R
A
T
E
A
A
L
R
G
G
V
R
V
R
D
T
L
A
A
V
E
A
I
S
I
A
G
G
R
A
V
V
M
T
---
Y
W
N
P
V
L
R
Y
-----
G
V
D
A
--
F
A
-
R
D
L
A
---
A
A
GG
L
G
L
I
---
T
P
D
L
I
P
D
E
A
-
Q
Q
W
L
--------
A
-
A
S
E
E
H
R
L
D
R
I
F
L
V
A
P
S
-
S
T
P
E
R
L
---
A
-------------
A
T
V
E
------
A
S
R
G
F
V
Y
A
A
S
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
6
PsiBlast_PDB
88.25
29%
0
- C- -
-
5TCJ
2
?
A:
[69-195]
-------------------------------------------------------------------------------------------------------------------------------------------
G
P
---
T
I
A
R
A
T
E
A
A
L
R
G
G
V
R
V
R
D
T
L
A
A
V
E
A
I
S
I
A
G
G
R
A
V
V
M
T
---
Y
W
N
P
V
L
R
Y
-----
G
V
D
A
--
F
A
-
R
D
L
A
---
A
A
GG
L
G
L
I
---
T
P
D
L
I
P
D
E
A
-
Q
Q
W
L
--------
A
-
A
S
E
E
H
R
L
D
R
I
F
L
V
A
P
S
-
S
T
P
E
R
L
---
A
-------------
A
T
V
E
------
A
S
R
G
F
V
Y
A
A
S
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
5
PsiBlast_PDB
88.25
29%
0
- C- -
-
5TCI
2
?
A:
[69-195]
-------------------------------------------------------------------------------------------------------------------------------------------
G
P
---
T
I
A
R
A
T
E
A
A
L
R
G
G
V
R
V
R
D
T
L
A
A
V
E
A
I
S
I
A
G
G
R
A
V
V
M
T
---
Y
W
N
P
V
L
R
Y
-----
G
V
D
A
--
F
A
-
R
D
L
A
---
A
A
GG
L
G
L
I
---
T
P
D
L
I
P
D
E
A
-
Q
Q
W
L
--------
A
-
A
S
E
E
H
R
L
D
R
I
F
L
V
A
P
S
-
S
T
P
E
R
L
---
A
-------------
A
T
V
E
------
A
S
R
G
F
V
Y
A
A
S
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
4
PsiBlast_PDB
88.25
29%
0
- C- -
-
5TCG
1
?
A:
[69-195]
-------------------------------------------------------------------------------------------------------------------------------------------
G
P
---
T
I
A
R
A
T
E
A
A
L
R
G
G
V
R
V
R
D
T
L
A
A
V
E
A
I
S
I
A
G
G
R
A
V
V
M
T
---
Y
W
N
P
V
L
R
Y
-----
G
V
D
A
--
F
A
-
R
D
L
A
---
A
A
GG
L
G
L
I
---
T
P
D
L
I
P
D
E
A
-
Q
Q
W
L
--------
A
-
A
S
E
E
H
R
L
D
R
I
F
L
V
A
P
S
-
S
T
P
E
R
L
---
A
-------------
A
T
V
E
------
A
S
R
G
F
V
Y
A
A
S
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
3
PsiBlast_PDB
88.25
29%
0
- C- -
-
5TCF
1
?
A:
[69-195]
-------------------------------------------------------------------------------------------------------------------------------------------
G
P
---
T
I
A
R
A
T
E
A
A
L
R
G
G
V
R
V
R
D
T
L
A
A
V
E
A
I
S
I
A
G
G
R
A
V
V
M
T
---
Y
W
N
P
V
L
R
Y
-----
G
V
D
A
--
F
A
-
R
D
L
A
---
A
A
GG
L
G
L
I
---
T
P
D
L
I
P
D
E
A
-
Q
Q
W
L
--------
A
-
A
S
E
E
H
R
L
D
R
I
F
L
V
A
P
S
-
S
T
P
E
R
L
---
A
-------------
A
T
V
E
------
A
S
R
G
F
V
Y
A
A
S
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
36
Fugue
76.35
14%
0
- C- -
-
1DDT
1
?
?:
[1-199]
------------------------------------------------------------------------------------------GADDVVDS
S
K
S
F
--------
V
M
E
-------
N
F
--
S
S
Y
H
---
G
T
----
K
P
G
Y
---
V
D
S
I
Q
K
--
G
I
Q
K
P
K
S
G
T
Q
G
N
Y
D
D
D
W
K
----
G
F
Y
S
T
D
N
---
K
Y
D
-
A
A
G
Y
-----
S
V
D
N
--
E
N
-
P
L
S
G
K
A
G
G
V
--
V
K
V
T
---
Y
P
G
L
T
K
V
L
A
L
K
V
----------
D
-
N
A
E
T
I
K
K
E
L
-----
G
L
--
S
L
T
E
P
--
L
M
-------------
E
Q
V
G
------
T
E
E
F
I
K
R
F
G
D
G
A
S
R
V
V
L
S
L
------
P
F
A
-----------
E
G
S
S
S
V
E
Y
I
N
N
-------
W
E
Q
A
K
A
L
S
V
E
L
E
I
N
F
E
T
R
G
--
K
R
G
------
Q
D
A
M
Y
E
Y
M
A
Q
A
C
A
-------------------------------------------------------------------------------------------------------------------------------
31
Fugue
57.01
22%
-91
* C6 *
-
1ZEL
10
?
A:
[2-297]
------------------------------------------------------------------------------------------------A
M
V
V
S
P
AGA
D
R
R
I
P
T
W
A
-------
S
R
--
V
V
S
G
---
L
A
----
R
D
R
P
VVV
T
K
E
D
L
T
Q
R
L
T
E
A
G
C
G
R
D
P
D
S
A
I
R
E
L
R
R
I
--
G
W
L
V
Q
L
P
VKG
T
W
A
-
F
I
P
P
-----
G
E
A
A
--
I
S
D
P
Y
L
P
---
L
R
--
S
W
L
A
R
D
Q
N
A
G
F
M
L
A
G
A
S
A
A
W
H
L
GYLD
R
Q
P
D
-
G
R
I
P
I
W
L
P
P
-----
A
K
-
R
L
P
D
G
L
--
A
S
Y
V
S
V
V
R
I
PWNAAD
T
A
L
L
------
A
P
R
P
A
L
L
V
R
R
R
L
D
L
V
A
W
A
T
G
L
P
A
L
G
P
E
A
-----------
L
L
V
Q
I
A
T
R
P
A
S
F
G
P
W
A
D
L
V
P
H
L
D
D
L
V
A
D
-----
C
S
D
E
R
L
E
R
L
L
SGRP
T
S
A
W
Q
R
A
S
Y
L
L
D
S
G
G
E
P
A
R
G
Q
A
L
L
A
K
RHTEVMPVTRFTTAHSG
E
S
V
W
A
PEYQLVDEL
V
V
P
L
L
R
V
I
G
K--------------------------------------------------------------------------
8
PsiBlast_PDB
55.24
29%
-58
- C5 -
-
5OCW
-
?
A:
[89-207]
-------------------------------------------------------------------------------------------------------------------------------------------
G
P
---
T
I
A
R
A
T
E
A
A
L
R
G
G
V
R
V
R
D
T
L
A
A
V
E
A
I
S
I
A
G
G
R
A
V
V
M
T
---
Y
W
N
P
V
L
R
Y
-----
G
V
D
A
--
F
A
-
R
D
L
A
---
A
A
GG
L
G
L
I
---
T
P
D
L
I
P
D
E
A
-
Q
Q
W
L
--------
A
-
A
S
E
E
H
R
L
D
R
I
F
L
V
A
P
S
-
S
T
P
E
R
L
---
A
-------------
A
T
V
E
------
A
S
R
G
F
V
Y
A
A
S
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
34
Fugue
53.97
20%
-48
- C2 -
-
4MND
3
DIPPS_ARCFU
A:
[40-457]
L
M
K
A
V
I
L
A
A
G
LGGGVPKPLVRVGGCE
I
I
L
R
T
M
K
L
L
S
PHVS
E
F
I
I
V
A
S
RY
A
D
D
I
D
A
F
L
KDKGFN
Y
K
I
V
R
H
DRPEKG
N
G
Y
S
L
L
V
A
KNHVED
R
F
I
L
T
M
GD
H
V
Y
S
Q
--------
Q
F
I
E
K
A
V
R
GE
G
V
--
I
A
D
R
EPR
F
V
----
D
I
G
E
---
A
T
K
I
R
V
E
D
G
R
V
A
K
I
G
K
D
L
R
E
F
D
C
V
D
T
----
G
F
F
V
L
D
D
---
S
I
F
-
E
H
A
E
-----
K
L
R
D
RE
E
I
-
P
-
L
S
---
E
I
--
V
K
L
A
---
R
L
P
-
V
T
Y
V
D
G
E
L
W
M
D
V
D
-----
T
-
K
E
D
V
R
R
A
N
R
-----
A
L
-
V
S
A
A
V
G
DG
F
I
-------------
S
R
K
I
------
N
R
K
I
S
T
R
I
S
A
A
I
V
N
K
-----------------------------------
V
N
P
N
Q
M
T
L
I
S
F
L
V
G
A
F
S
A
L
A
S
F
F
S
----
I
P
L
------
A
G
L
L
Y
Q
F
S
S
I
L
D
G
C
D
G
E
I
A
R
A
S
LKMS
K
K
G
G
Y
V
D
S
I
L
D
R
F
V
D
F
L
F
L
A
I
I
A
L
L
Y
PKT
A
T
V
A
M
F
A
I
F
G
S
V
M
V
S
Y
T
S
E
K
Y
K
A
E
FGESIRVLNYIPGK
R
D
E
R
I
F
L
I
M
I
F
C
L
L
S
A
I
SL
Q
W
I
F
W
M
F
L
F
V
A
A
I
S
L
T
R
V
V
V
T
L
L
A
V
L
V
S
33
Fugue
49.92
20%
-57
- C4 -
-
5EDF
2
?
A:
[2-225]
----------------------------------------------------------------------------------EQTSFNNPEPMTGFE
H
T
V
T
F
--------
D
F
Q
-------
G
T
K
M
V
I
P
Y
---
G
Y
LARY
T
Q
D
N
---
A
T
K
W
L
S
D
T
P
G
Q
D
A
Y
S
I
N
L
-----
I
E
I
----
S
V
Y
Y
K
K
T
---
D
Q
G
-
W
V
L
E
P
YNQQ
N
K
A
H
--
F
I
-
Q
F
L
R
---
D
G
--
L
D
S
V
---
D
D
I
V
I
R
K
D
A
C
S
L
S
T
--------
T
M
G
E
R
L
L
T
Y
G
V
-----
K
K
M
P
S
A
Y
P
E
--
Y
E
-------------
A
Y
E
D
KRHIPE
N
P
Y
F
H
E
F
Y
Y
I
K
K
G
E
N
P
A
I
I
------
T
H
R
N
NRINQTE
E
D
S
Y
S
T
S
V
G
S
C
I
N
G
F
T
V
Q
Y
Y
P
F
I
R
E
K
Q
Q
L
T
Q
Q
E
L
V
G
Y
H
Q
Q
V
E
Q
L
V
------
Q
S
F
V
N
N
--------------------------------------------------------------------------------------------------------------------------------------
38
Fugue
49.15
13%
-181
- C3 -
-
2BSQ
-
FITB_NEIG1
A:
[1-143]
----------------------------------------------------------------------------------------------------
M
I
--------
L
L
D
-------
T
N
--
V
I
S
E
---
P
L
----
R
P
Q
P
---
N
E
R
V
V
A
W
L
D
S
L
I
L
E
D
V
Y
L
S
A
I
T
V
A
E
M
----
R
L
G
V
A
L
L
---
L
N
G
----
K
-----
K
K
N
V
--
L
H
-
E
R
M
E
---
Q
S
--
I
L
P
L
---
F
A
G
R
I
L
----------------
P
-
F
D
E
P
V
A
A
I
Y
-----
A
Q
-
I
R
S
Y
A
K
--
T
H
-------------
G
K
E
I
------
A
A
A
D
G
Y
I
A
A
T
A
K
Q
H
-----------------------------------------------
S
M
T
V
A
T
R
-----
D
T
G
S
F
F
A
A
------
D
V
A
V
F
N
P
W
H
L
E
H
H
H
------------------------------------------------------------------------------------------------------------------------------
15
PsiBlast_PDB
48.49
37%
-362
- C5 -
-
2PF0
-
EXG1_CANAL
A:
[73-99]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
T
W
I
T
E
Q
D
F
K
Q
I
------
S
N
L
G
L
N
F
V
R
I
P
I
G
Y
W
A
----------------------------------------------------------------------------------------------------------------------------
11
PsiBlast_PDB
48.14
37%
-339
- C5 -
-
1EQP
-
EXG1_CANAL
A:
[73-99]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
T
W
I
T
E
Q
D
F
K
Q
I
------
S
N
L
G
L
N
F
V
R
I
P
I
G
Y
W
A
----------------------------------------------------------------------------------------------------------------------------
19
PsiBlast_PDB
47.89
37%
-343
- C5 -
-
4M81
-
EXG1_CANAL
A:
[72-98]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
T
W
I
T
E
Q
D
F
K
Q
I
------
S
N
L
G
L
N
F
V
R
I
P
I
G
Y
W
A
----------------------------------------------------------------------------------------------------------------------------
20
PsiBlast_PDB
47.19
37%
-313
- C5 -
-
4M82
-
EXG1_CANAL
A:
[72-98]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
T
W
I
T
E
Q
D
F
K
Q
I
------
S
N
L
G
L
N
F
V
R
I
P
I
G
Y
W
A
----------------------------------------------------------------------------------------------------------------------------
9
PsiBlast_PDB
46.74
37%
-319
- C5 -
-
1CZ1
-
EXG1_CANAL
A:
[73-99]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
T
W
I
T
E
Q
D
F
K
Q
I
------
S
N
L
G
L
N
F
V
R
I
P
I
G
Y
W
A
----------------------------------------------------------------------------------------------------------------------------
17
PsiBlast_PDB
46.28
37%
-308
- C5 -
-
3O6A
-
EXG1_CANAL
A:
[73-99]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
T
W
I
T
E
Q
D
F
K
Q
I
------
S
N
L
G
L
N
F
V
R
I
P
I
G
Y
W
A
----------------------------------------------------------------------------------------------------------------------------
16
PsiBlast_PDB
46.21
37%
-305
- C5 -
-
3N9K
-
EXG1_CANAL
A:
[72-98]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
T
W
I
T
E
Q
D
F
K
Q
I
------
S
N
L
G
L
N
F
V
R
I
P
I
G
Y
W
A
----------------------------------------------------------------------------------------------------------------------------
10
PsiBlast_PDB
45.96
37%
-313
- C5 -
-
1EQC
-
EXG1_CANAL
A:
[67-93]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
T
W
I
T
E
Q
D
F
K
Q
I
------
S
N
L
G
L
N
F
V
R
I
P
I
G
Y
W
A
----------------------------------------------------------------------------------------------------------------------------
18
PsiBlast_PDB
45.94
37%
-313
- C5 -
-
4M80
-
EXG1_CANAL
A:
[73-99]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
T
W
I
T
E
Q
D
F
K
Q
I
------
S
N
L
G
L
N
F
V
R
I
P
I
G
Y
W
A
----------------------------------------------------------------------------------------------------------------------------