@TOME V2.3
(Mar 2018)
Ref.
-
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Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
Show Ligands of Templates
Complexes Affinity Score
Main Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Complexes Tab
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : B0VS96: (2017-12-06 )
MKFKILLLSFSATGCYANESTADPDICNIVKKVAYNVMEARQQKVPAQDLQQIADGLADEKAKQLYQDLISSAYAAKVFKTSFFKRQAIEDFQAGWGFVAQTF
Atome Classification :
(20 SA)
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------.....-..----..10........20.--.......30....---------..-..40----.....-...50----.......----.--60....--...-.70.-------.---.------..-...80..---.-------.....90.------..-.....100.-------------------------------------------------------------------------------------------------------------------------------
(Atome)
(Ident)
(Tito)
(Num)
(QMean)
(Ligand)
(Uniprot)
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------M
K
F
K
I
-
L
L
----
L
S
FSATGCYANESTA--D
P
D
I
C
N
I
V
K
K
V
A
Y
---------
N
V
-
M
E
A
R
----
Q
QKV
P
-
A
Q
D
L
Q
----
Q
I
A
D
G
L
A
----
D
--
E
K
A
K
Q
L
--
Y
Q
D
-
L
I
S
S
-------
A
---
Y
------
A
A
-
K
V
F
K
T
S
F
---
F
-------
K
R
Q
A
I
E
D
F
------
Q
A
-
G
W
G
F
VAQTF-------------------------------------------------------------------------------------------------------------------------------
50
Fugue
57.91
14%
-27
- C3 -
-
1QGT
-
?
A:
[1-142]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MDIDPYKE
F
G
A
T
V
-
E
L
----
L
S
F
L
P
S
D
F
F
P
S
V
R
D
L
--
L
D
T
A
S
A
L
Y
R
E
A
L
E
SPEHCS
P
--
H
H
-
T
A
L
R
----
Q
A
I
L
C
-
W
G
E
L
M
----
T
L
A
T
W
V
G
N
N
LE
D
--
P
A
S
R
D
L
--
V
V
N
-
Y
V
N
T
-------
N
---
M
------
G
L
-
K
I
R
Q
L
L
W
---
F
H
I
S
C
L
T
F
G
R
E
T
V
L
E
Y
------
L
V
-
S
F
G
V
W
I
R
T
P
PAYRPP
N
A
P
I
L
S
T------------------------------------------------------------------------------------------------------------------
47
Fugue
56.34
17%
9
- C3 -
-
1ZRO
-
?
A:
[8-601]
NEVLSNCRE
K
R
K
G
MKWDCKKKNDRS
N
Y
V
C
I
P
D
R
R
I
Q
LCIVNLAIIKTYT
K
E
T
M
K
D
H
F
I
E
A
S
K
K
E
S
Q
L
L
L
K
K
N
DNKYN
S
K
F
C
N
D
L
K
N
S
F
L
D
Y
G
H
L
A
M
GNDMDFGG
Y
S
T
K
A
E
N
K
I
Q
E
V
F
K
G
A
HGEIS
E
H
K
I
K
N
F
R
K
K
W
W
N
E
F
R
E
K
L
W
E
A
M
L
SEHKNNICKNIPQEEL
Q
I
T
Q
W
I
K
E
W
H
G
E
F
L
L
E
R
D
N
R
A
K
L
P
K
S
K
C
KNNALYEACE
K
E
C
I
D
P
C
M
K
Y
R
D
W
I
I
R
S
K
F
E
W
H
T
L
S
K
E
Y
E
T
Q
KVPKEN
A
E
N
Y
L
I
K
I
SENKNDAK
V
S
L
L
L
N
N
C
D
A
E
Y
S
K
Y
CDCKHT
T
T
L
V
K
S
V
L
N
GNDNTI
K
E
K
R
E
HID
L
D
D
F
S
K
F
GCDKNSVDTNTK
V
W
E
C
K
K
PYKLSTKDVCVP
P
R
R
Q
E
LCLGNIDRIYDKN
L
L
M
I
K
E
H
I
-
L
A
----
I
A
I
Y
E
S
R
I
L
K
R
K
Y
K
N
KD
D
K
E
V
C
K
I
I
N
K
T
F
A
---------
D
I
-
R
D
I
I
----
G
G
T
---------------
D
Y
W
N
----
D
--
L
S
N
R
K
L
--
V
G
K
-
I
N
T
N
SNYVHRN
K
---
Q
------
N
D
-
K
L
F
R
D
E
W
---
W
-------
K
V
I
K
K
D
V
W
------
N
V
I
S
W
V
F
K
D
K
T
V
CKEDDIENIP
Q
F
F
R
W
F
S
E
W
G
D
D
Y
C
Q
D
K
T
K
M
I
E
T
L
K
V
E
CCED
D
N
C
K
R
K
C
N
S
Y
K
E
W
I
S
K
K
K
E
E
Y
N
K
Q
A
K
Q
Y
Q
E
Y
Q
K
G
NNYKMYSEFKSIK
P
E
V
Y
L
K
K
YSEKCSNLNFEDEFKEELH
S
D
Y
K
N
KCTMCPEV
46
Fugue
52.54
18%
-15
- C3 -
-
2MH3
-
HES1_HUMAN
A:
[26-95]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
K
P
K
T
A
--
S
E
H
-----
R
K
S
S
K
---------
P
I
-
M
E
K
R
----
R
R
A
R
I
-
N
E
S
L
S
----
Q
L
K
T
L
I
L
----
D
--
A
L
K
K
D
----
S
S
-
R
H
S
K
-------
L
---
E
------
K
A
-
D
I
L
E
M
T
V
---
K
-------
H
L
R
N
L
Q
R
A
------
Q
------------------------------------------------------------------------------------------------------------------------------------------
45
HHSearch
52.07
10%
-82
- C3 -
-
3D5L
-
?
A:
[132-194]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
I
R
-
Q
H
L
R
----
Q
K
G
I
G
-
E
S
D
I
D
----
D
A
L
T
Q
F
T
----
P
--
E
V
Q
A
E
L
--
A
K
K
-
L
A
L
K
-------
L
---
F
------
R
R
Y
R
N
Q
P
E
R
R
---
R
-------
E
Q
K
V
Q
Q
G
L
------
T
T
-
K
G
F
-------------------------------------------------------------------------------------------------------------------------------------
53
Fugue
51.42
29%
66
- C- -
-
1O22
-
?
A:
[6-154]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------I
L
E
I
L
Y
Y
K
K
G
K
E
F
G
I
-
L
E
K
K
M
K
E
I
F
N
E
T
G
-
V
S
L
E
P
V
N
--
S
E
L
I
G
R
I
F
L
K
I
S
V
L
E
EG
E
E
V
P
S
F
A
-
I
K
A
L
----
T
P
K
E
N
-
A
V
D
L
P
LG
D
W
T
D
L
K
N
V
F
----
V
--
E
E
I
D
Y
L
D
S
Y
G
D
M
K
I
L
S
-------
E
KN
W
Y
------
K
I
-
Y
V
P
Y
S
S
V
KKK
N
-------
R
N
E
L
V
E
E
F
M
K
Y
F
F
E
S
K
-
G
W
N
P
G
E
Y
T
F
S
V
Q
E
I--------------------------------------------------------------------------------------------------------------------------
55
Fugue
49.95
22%
1
- C2 -
-
3WEB
1
?
A:
[1-132]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FVFEDCGSEV
G
K
F
S
D
-
I
I
----
I
S
----
S
C
D
P
S
E
E
K
-------
C
S
I
I
R
E
S
E
I
---------
H
V
S
M
K
F
T
P
SVD
V
K
N
V
E
-
A
K
A
F
G
----
V
L
L
D
V
P
V
----
P
F
P
L
K
K
P
E
I
--
C
K
D
-
P
D
S
G
-------
V
---
K
CPLKKD
V
E
-
I
E
Y
K
V
T
F
---
F
V
E
-----
K
A
T
P
A
L
S
L
------
E
I
-
M
W
E
F
R
N
E
K
D
EKI
T
C
V
K
F
P
A
K
IK------------------------------------------------------------------------------------------------------------------
35
HHSearch
47.85
8%
-240
- C4 -
-
1LFP
-
Y1575_AQUAE
A:
[47-72]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
P
R
L
R
T
---------
A
I
-
E
Q
A
K
----
K
A
N
M
P
-
W
E
N
I
E
----
R
A
I
K
K
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
43
HHSearch
47.25
19%
-195
- C4 -
-
2YAL
-
B:
[10-30]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
K
---------
L
V
-
R
D
A
M
----
T
S
G
V
S
-
K
K
Q
F
R
----
E
F
L
D
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
38
HHSearch
45.64
10%
-141
- C3 -
-
3DFG
-
RECX_XANCP
A:
[85-147]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
L
H
---------
I
R
-
A
E
L
G
----
T
H
G
L
D
-
S
D
A
V
S
----
A
A
M
A
T
F
-----
E
--
G
D
W
T
E
N
--
A
L
D
-
L
I
R
R
-------
R
---
F
------
G
E
-
D
G
P
V
D
L
A
---
Q
-------
R
R
K
A
A
D
L
L
------
A
R
-
R
G
F
-------------------------------------------------------------------------------------------------------------------------------------
34
HHSearch
45.47
9%
-171
- C4 -
-
1B0N
-
SINI_BACSU
B:
[15-37]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
W
V
E
---------
L
M
-
V
E
A
K
----
E
A
N
I
S
-
P
E
E
I
R
----
K
Y
L
L
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
13
PsiBlast_PDB
45.36
23%
-128
- C4 -
-
4MLK
-
?
A:
[137-180]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
N
T
C
H
L
I
R
H
L
L
S
---------
R
L
-
L
E
A
Q
----
K
N
P
I
G
-
E
K
N
L
Q
----
E
I
Q
E
D
L
D
----
S
--
L
R
A
H
----
F
E
E
-
L
T
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
42
HHSearch
40.31
19%
-125
- C4 -
-
2YAL
-
SINR_BACSU
A:
[10-30]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
K
---------
L
V
-
R
D
A
M
----
T
S
G
V
S
-
K
K
Q
F
R
----
E
F
L
D
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
1
PsiBlast_PDB
40.20
43%
68
- C4 -
-
4V2R
-
PAM_TAXWC
A:
[640-662]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
V
-
M
S
A
R
----
R
E
Q
T
P
-
Q
E
D
V
Q
----
K
V
F
D
A
I
A
----
D
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
7
PsiBlast_PDB
38.37
43%
99
- C4 -
-
4V2Q
-
PAM_TAXWC
A:
[640-662]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
V
-
M
S
A
R
----
R
E
Q
T
P
-
Q
E
D
V
Q
----
K
V
F
D
A
I
A
----
D
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
10
PsiBlast_PDB
37.53
43%
114
- C4 -
-
4C6G
-
PAM_TAXWC
A:
[640-662]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
V
-
M
S
A
R
----
R
E
Q
T
P
-
Q
E
D
V
Q
----
K
V
F
D
A
I
A
----
D
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
51
Fugue
37.25
19%
14
- C3 -
-
3BY7
-
?
A:
[2-86]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
K
N
I
K
I
M
R
L
----
V
------------
T
G
--
E
D
I
I
G
N
I
S
E
S
Q
G
L
---------
I
T
-
I
K
K
A
----
F
V
I
I
P
M
Q
P
V
Q
L
----
V
L
S
P
W
Q
P
----
Y
--
T
D
D
K
E
I
--
V
I
D
-----------------------
D
S
-
K
V
I
T
I
T
S
---
P
-------
K
D
D
I
I
K
S
Y
------
E
S
-------
H
T
--------------------------------------------------------------------------------------------------------------------------------
14
PsiBlast_PDB
37.01
36%
-25
- C4 -
-
2JNU
-
RGS14_HUMAN
A:
[49-81]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
R
----
F
Q
Q
I
P
-
A
S
D
T
Q
----
Q
L
A
-----------
Q
E
A
R
N
I
--
Y
Q
E
-
F
L
S
S
-------
Q
---
A
------
L
S
-
P
V
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------
9
PsiBlast_PDB
36.82
43%
97
- C4 -
-
4C5U
-
?
A:
[640-662]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
V
-
M
S
A
R
----
R
E
Q
T
P
-
Q
E
D
V
Q
----
K
V
F
D
A
I
A
----
D
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
3
PsiBlast_PDB
36.58
43%
130
- C4 -
-
4BAB
-
PAM_TAXWC
A:
[640-662]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
V
-
M
S
A
R
----
R
E
Q
T
P
-
Q
E
D
V
Q
----
K
V
F
D
A
I
A
----
D
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
11
PsiBlast_PDB
36.23
43%
98
- C4 -
-
3NZ4
-
PAM_TAXCA
A:
[639-660]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
V
-
M
S
A
R
----
R
E
Q
T
P
-
Q
E
D
V
Q
----
K
V
F
D
A
I
A
----
D
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------