@TOME V2.3
(Mar 2018)
Ref.
-
-
Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
Show Ligands of Templates
Complexes Affinity Score
Main Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Complexes Tab
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : B0VU32: (2017-12-16 )
MSKRQKIAAQNRDELLNAAEECFRIHGINVPLQVVIDHAGVGRATFYRNFCDRKALISALLERAITQLEQKAAHFQQFEDGLFRLIEGHIAQLPKLAILQDFWRVIDRQDPIMLKIYERRNNALKPLIENAIEQKLCRADLTADDYAMFTAMLGSSFQGHEPEEQTRLAKRAIELLFHGIQVQKIRGIE
Atome Classification :
(20 SA)
---.........10........20........-30........40........50........60........70....-----.------.------.--.80........90....-----....100-.....---.---.----------.---.-110-..----.----...-...120.......130..-----...---------..140....-.-.-.150.....-.-.160---.---.-.......170.......180.......---
(Atome)
(Ident)
(Tito)
(Num)
(QMean)
(Ligand)
(Uniprot)
---M
S
K
R
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K
I
A
AQ
N
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N
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C
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IHGIN-V
P
L
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IDHAGV
G
R
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N
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F
-----
Q
------
Q
------
F
--
E
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G
L
F
R
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I
E
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H
I
A
QL
P
K
-----
L
A
I
L
Q
---
D
F
W
R
V
---I---D----------R---Q-D---
P
I
----
M
----
L
K
I
-
Y
E
RRNN
A
L
K
P
L
I
E
N
A
I
E
Q
-----
K
L
C---------RADLTA
D
D
Y
-
A
-
M
-
F
T
A
M
LGSSF-Q-GH-----E---
P
-
E
E
Q
T
R
L
A
K
R
A
I
E
L
L
F
HG
I
Q
V
Q
K
IRGIE---
100
HHSearch
72.40
20%
-78
- C2 -
-
2REK
-
?
B:
[11-193]
-------
R
A
D
A
R
R
N
Y
D
R
I
I
E
A
A
A
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A
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H
G
A
D
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A
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H
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P
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A
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A
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W
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F
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A
V
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T
R
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A
A
---
R
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L
L
-----------------------------
A
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----
L
D---
S
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C
-
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Q
L
L
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V
---------
R
D
D
V
T
A
L
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L
-----
S
L
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N
A
V
S
-
L
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A
A
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H
---
T
-
P
D
A
A
H
H
A
T
R
L
M
G
I
A
L
G
G
L
G
A
P
---------
98
HHSearch
71.03
18%
5
- C2 -
-
2F07
2
YVDT_BACSU
A:
[2-196]
----
F
T
M
P
K
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P
A
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D
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-----
L
HGDE--
D
------
F
--
W
T
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-----
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---
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C
Y
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---
G
---
L
----------
A
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I
-
D
HS
M
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K
----
W
----
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I
-
Y
Q
P
Y
Y
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-----
H
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---------
T
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W
T
-
A
R
T
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A
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F
YIGFE
Q
---
D
-
E
N
V
E
V
Y
K
K
E
I
F
T
F
L
K
R
S
L
G
T
----------
99
HHSearch
70.76
18%
4
- C2 -
-
2F07
2
YVDT_BACSU
B:
[2-196]
----
F
T
M
P
K
Q
T
S
G
K
Y
E
K
I
L
Q
A
A
I
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L
D
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A
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I
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N
A
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P
A
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H
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R
-----
L
HGDE--
D
------
F
--
W
T
V
L
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L
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R
-----
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---
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Y
S
---
G
---
L
----------
A
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I
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D
HSM
E
K
----
W
----
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T
I
-
Y
Q
P
Y
Y
S
W
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I
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K
A
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A
N
-----
H
E
V
---------
T
E
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W
T
-
A
R
T
-
I
I
N
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V
E
N
T
A
-
E
-
R
F
YIGFE
Q
---
D
-
E
N
V
E
V
Y
K
K
E
I
F
T
F
L
K
R
S
L
G
T
----------
101
HHSearch
70.13
20%
-69
- C2 -
-
2REK
-
?
A:
[12-192]
--------
A
D
A
R
R
N
Y
D
R
I
I
E
A
A
A
A
E
V
A
R
H
G
A
D
-
A
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R
H
F
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G
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Q
E
R
V
A
Q
L
C
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L
A
A
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--
H
------
P
------
P
--
A
T
A
L
T
R
W
L
T
S
L
A
V
F
G
A
V
-----
T
R
G
A
A
---
R
S
L
------------------------------
A
A
----
L
D---
S
R
C
-
E
Q
L
L
T
E
A
G
A
D
L
L
A
R
A
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D
-----
G
T
V
---------
R
D
D
V
T
A
L
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L
-
L
-----
S
L
A
N
A
V
S
-
L
-
A
A
E----
H
---
T
-
P
D
A
A
H
H
A
T
R
L
M
G
I
A
L
G
G
L
G
A
----------
93
HHSearch
64.30
19%
-54
- C2 -
-
3VIB
2
MTRR_NEIGO
C:
[5-208]
-------
K
T
E
A
L
K
T
K
E
H
L
M
L
A
A
L
E
T
F
Y
R
K
G
I
A
R
T
S
L
N
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A
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T
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A
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W
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D
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F
D
A
L
F
Q
R
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D
D
I
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N
C
I
A
Q
-------DAEG--
G
------
S
--
W
T
V
F
R
H
T
L
L
H
F
F
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R
L
Q
S
-----
N
D
I
H
Y
K
F
H
N
I
L
F
L
KCE
H
---
T
----------
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---
Q
-
N
---
A
A
----
V
I
A
I
A
R
K
H
-
Q
A
I
W
R
E
K
I
T
A
V
L
T
E
A
V
E
N
-----
Q
D
L
---------
A
D
D
L
D
K
E
T
A
-
V
I
F
-
I
K
S
T
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D
G
L
I
-
W
-
R
W
F
S
S
G-
E
---
S
-
F
D
L
G
K
T
A
P
R
I
I
G
I
M
M
D
N
L
E
N
H
P
C
L
R
-----
96
HHSearch
63.66
14%
-44
- C2 -
-
2GFN
-
?
A:
[4-199]
-------
I
V
D
H
D
E
R
R
R
A
L
A
D
A
V
L
A
L
I
A
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I
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W
S
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V
L
N
H
Y
F
G
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R
H
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L
L
L
A
A
L
R
R
A
G
D
I
Q
G
D
R
Y
R
T
I
L
D
EEG
A
------
G
------
P
--
I
E
K
L
R
N
I
T
A
S
I
L
P
L
D
E
R
-----
R
L
A
M
T
---
R
V
F
L
F
---
F
Y
A
E
G
---------------------
T
AR
G
E
I
----
A
A
F
-
L
A
R
W
R
G
V
V
R
E
S
V
V
A
A
Q
R
E
-----
G
T
V
---------
S
T
D
L
D
A
D
A
V
-
T
V
A
-
L
V
A
L
T
D
G
L
A
-
L
-
Q
A
I
L
D
P-
V
V
M
K
A
-
I
S
A
E
D
A
A
A
R
C
V
D
A
A
V
R
R
-------------
95
HHSearch
62.08
14%
-36
- C2 -
-
2GFN
-
?
B:
[7-199]
----------
H
D
E
R
R
R
A
L
A
D
A
V
L
A
L
I
A
R
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G
I
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A
V
T
T
R
A
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A
E
E
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W
S
T
G
V
L
N
H
Y
F
G
S
R
H
E
L
L
L
A
A
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R
A
G
D
I
Q
G
D
R
Y
R
T
I
L
D
EEG
A
------
G
------
P
--
I
E
K
L
R
N
I
T
A
S
I
L
P
L
D
E
R
-----
R
L
A
M
T
---
R
V
F
L
F
---
F
Y
A
E
G
----------
A
---
A
-
E
---
E
T
A
R
G
E
I
----
A
A
F
-
L
A
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W
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G
V
V
R
E
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-----
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T
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---------
S
T
D
L
D
A
D
A
V
-
T
V
A
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A
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G
L
A
-
L
-
Q
A
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L
D
P-
V
V
M
K
A
-
I
S
A
E
D
A
A
A
R
C
V
D
A
A
V
R
R
-------------
85
Fugue
61.96
15%
-43
- C2 -
-
1T56
3
ETHR_MYCTU
A:
[22-214]
----------
G
D
D
R
E
L
A
I
L
A
T
A
E
N
L
L
E
D
R
P
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A
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D
D
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A
K
G
A
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I
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F
Y
F
Y
F
P
S
K
E
A
V
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L
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D
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V
V
N
Q
A
D
M
A
L
Q
T
L
-----
A
------
E
N
PADTD
R
--
E
N
M
W
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G
I
N
V
F
F
E
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S
-----
H
K
A
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---
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A
G
Q
A
---
A
---
R
----------
A
---
T
-
S
---
V
E
----
V
----
A
E
L
-
W
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F
M
Q
K
W
I
A
Y
T
A
A
V
I
D
A
-----
E
R
D
R
GAAPRTLP
A
H
E
L
A
T
A
L
N
-
L
-
M
-
N
E
R
T
L
F
A
S
F
-
A
-
G
E
-----
Q
---
P
S
V
P
E
A
R
V
L
D
T
L
V
H
I
W
V
T
S
I
Y
G
E
---------
84
Fugue
60.59
14%
-37
- C2 -
-
2UXU
1
TTGR_PSEPT
A:
[5-210]
------
T
K
E
E
A
Q
E
T
R
A
Q
I
I
E
A
A
E
R
A
F
Y
K
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G
V
A
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T
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A
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I
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E
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A
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V
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A
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Y
W
H
F
N
N
K
A
E
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Q
A
L
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H
E
T
H
D
H
L
A
R
A
S
-----
E
------
S
EDEVD-
P
--
L
G
C
M
R
K
L
L
L
Q
V
F
N
E
L
V
L
-----
D
A
R
T
R
---
R
I
N
E
I
---
L
---
H
HK
C
E
F
T
DDMC
E
---
I
-
R
---
Q
Q
----
R
----
Q
S
A
-
V
L
D
C
H
K
G
I
T
L
A
L
A
N
A
V
R
R
GQLPG
E
L
D
---------
A
E
R
A
A
V
A
M
F
-
A
-
Y
-
V
D
G
L
I
R
R
W
L
-
L
-
L
P
-----
D
---
S
-
V
D
L
L
G
D
V
E
K
W
V
D
T
G
L
D
M
L
R
L
S
P
A
L
R
K
----
107
HHSearch
60.56
16%
-13
- C2 -
-
3ON2
1
?
D:
[5-197]
-----
E
Q
P
Y
H
H
G
S
L
R
R
V
L
L
A
R
A
E
S
T
L
E
K
D
G
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D
G
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Q
L
A
R
E
A
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S
H
A
A
P
S
K
H
F
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R
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A
L
L
D
A
L
A
E
S
G
F
L
R
L
T
A
A
L
E
R
A
-----
V
EEAES-
H
------
A
--
R
A
R
F
A
A
L
A
G
A
Y
V
S
F
A
L
A
-----
H
R
E
L
L
---
A
L
M
Y
G
---
N
---
K
--------------
H
-
A
---
P
G
----
A
ASQV
V
E
A
-
G
H
A
S
M
D
L
T
V
R
I
V
T
E
A
Q
A
A
-----
G
D
I
---------
G
P
G
-
D
A
S
R
I
-
A
L
V
-
A
F
A
T
F
H
G
I
A
-
T
-
L
A
AGGML
D
---
G
-
A
P
V
D
E
V
V
T
A
A
S
D
T
F
W
R
G
L
A
-----------
89
HHSearch
60.32
13%
-22
- C2 -
-
2GEN
-
?
A:
[6-193]
-------------
R
K
D
E
I
L
Q
A
A
L
A
C
F
S
E
H
G
V
D
A
T
T
I
E
M
I
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D
R
S
G
A
S
I
G
S
L
Y
H
H
F
G
N
K
E
R
I
H
G
E
L
Y
L
A
G
I
G
Q
Y
A
A
L
L
E
A
G
F
A
R
A-
R
------
S
------
A
--
E
E
T
V
R
L
L
V
T
S
Y
I
D
W
V
V
A
-----
N
P
D
W
A
---
R
F
I
L
H
---
S
---
R
G
---------
R
V
--
E
-
A
---
G
E
L
G
E
R
L
----
R
A
D
-
N
Q
A
H
F
A
R
I
H
A
A
L
A
G
Y
R
A
E
-----
G
L
F
---------
R
E
-
M
P
D
D
C
F
A
S
-
V
-
V
I
G
P
A
H
D
L
A
-
R
-
Q
W
L
A
GR-
T
---
R
-
V
A
L
A
D
C
R
E
L
L
A
Q
V
A
W
D
S
V
R
A
A
---------
80
Fugue
60.24
13%
-41
- C2 -
-
3FRQ
5
?
A:
[6-190]
----------
K
L
K
S
D
D
E
V
L
E
A
A
T
V
V
L
K
R
C
G
P
I
E
F
T
L
S
G
V
A
K
E
V
G
L
S
R
A
A
L
I
Q
R
F
T
N
R
D
T
L
L
V
R
M
M
E
R
G
V
E
Q
V
R
H
Y
L
N
A
I
-----
P
------
I
------
G
A
G
P
Q
G
L
W
E
F
L
Q
V
L
V
R
S
M
N
T
-----
R
N
D
F
S
---
V
N
Y
L
I
---
S
---
W
----------
Y
---
E
-
L
---
Q
----------
V
P
E
-
L
R
T
L
A
I
Q
R
N
R
A
V
V
E
G
I
R
K
-----
R
L
----------
P
P
G
A
P
A
A
A
E
-
L
-
L
-
L
H
S
V
I
A
G
A
T
-
M
-
Q
W
-----
A
---
V
-
D
P
D
G
E
L
A
D
H
V
L
A
Q
I
A
A
I
L
C
L
M
F
P
E
H
D
D
FQL
1
PsiBlast_PDB
59.12
31%
-183
- C2 -
-
2Q24
-
?
A:
[16-95]
-------------
N
R
D
K
I
L
A
A
A
V
R
V
F
S
E
E
G
L
D
-
A
H
L
E
R
I
A
R
E
A
G
V
G
S
G
T
L
Y
R
N
F
P
T
R
E
A
L
I
E
A
A
Y
R
N
E
V
A
R
L
C
D
S
---------------------------------
V
P
G
L
L
A
E
L
P
P
-----
A
E
A
L
R
---
A
W
T
R
----------------------------------------------------------------------------------------------------------------------------------------------------
97
HHSearch
58.61
13%
-7
- C2 -
-
3QKX
1
Y893_HAEIN
A:
[3-187]
-------
R
Q
A
K
T
D
L
A
E
Q
I
F
S
A
T
D
R
L
M
A
R
E
G
L
N
Q
L
S
M
L
K
L
A
K
E
A
N
V
A
A
G
T
I
Y
L
Y
F
K
N
K
D
E
L
L
E
Q
F
A
H
R
V
F
S
M
F
M
A
T
L
E
K
D
FDET-
K
------
P
------
F
--
F
E
Q
Y
R
Q
M
W
K
N
I
W
Y
F
L
Q
E
-----
N
P
T
I
L
---
S
N
L
K
Q
---
Y
---
E
--------------
S
-
L
---
P
N
----
F
----
K
D
I
C
K
N
I
K
N
C
R
W
D
L
F
C
H
Q
A
Q
K
A
-----
G
L
L
---------
A
-
E
L
S
E
D
I
L
-
F
L
L
-
S
L
K
T
A
I
N
L
A
-
S
-
D
A
K----
F
I-----
L
K
P
E
I
L
E
S
V
I
E
R
S
W
R
A
I
Q
-----------
86
Fugue
58.48
14%
4
- C2 -
-
2PBX
-
?
A:
[5-200]
I
E
K
R
P
R
T
R
L
S
P
Q
K
R
K
L
Q
L
M
E
I
A
L
E
V
F
A
K
R
G
I
G
R
G
G
H
A
D
I
A
E
I
A
Q
V
S
V
A
T
V
F
N
Y
F
P
T
R
E
D
L
V
D
D
V
L
N
F
V
V
R
Q
Y
S
N
F
L
T
D
H
IDLD-
L
------
D
------
V
--
K
T
N
L
Q
T
L
C
K
E
M
V
K
L
A
M
T
DC
H
W
L
K
V
W
F
E
---
W
S
A
S
T
---
R
---
D
----------
E
---
V
-
W
---
P
L
----
F
----
V
S
T
-
N
R
T
N
Q
L
L
I
R
N
M
F
M
K
A
M
E
R
-----
G
E
L
---------
C
E
K
H
D
V
D
N
M
-
A
S
L
-
F
H
G
I
F
Y
S
I
F
-
L
-
Q
V
-----
N
---
R
-
L
G
E
Q
E
A
V
Y
K
L
A
D
S
Y
L
N
M
L
C
I
----------
91
HHSearch
57.95
17%
5
- C2 -
-
2O7T
2
?
A:
[2-189]
------
M
R
A
D
A
L
K
R
R
E
H
I
I
T
T
T
C
N
L
Y
R
T
H
H
H
D
S
L
T
M
E
N
I
A
E
Q
A
G
V
G
V
A
T
L
Y
R
N
F
P
D
R
F
T
L
D
M
A
C
A
Q
Y
L
F
N
V
V
I
S
L
Q
L
Q
A
-----
I
S
T
FPT-
D
------
P
--
E
G
V
W
T
S
F
N
Q
L
L
F
D
R
G
-------
L
G
S
L
V
P
--
A
L
A
P
E
---
S
---
L
----------
D
---
D
L
P
---
D
E
----
V
----
S
A
L
-
R
R
T
T
E
K
N
T
T
T
L
I
N
L
A
K
Q
H
-----
G
L
V
---------
H
H
D
I
A
P
G
T
Y
-
I
V
G
-
L
I
T
I
S
R
P
P
I
-
T
-
A
L
---------
A
-
T
I
S
E
N
S
H
K
A
L
L
G
L
Y
L
S
G
L
K
H
G
M
M
-------
106
HHSearch
56.24
16%
-24
- C2 -
-
3ON2
1
?
A:
[5-197]
-----
E
Q
P
Y
H
H
G
S
L
R
R
V
L
L
A
R
A
E
S
T
L
E
K
D
G
V
D
G
L
S
L
R
Q
L
A
R
E
A
G
-----
P
S
K
H
F
R
D
R
Q
A
L
L
D
A
L
A
E
S
G
F
L
R
L
T
A
A
L
E
R
A
-----
V
E
E
A
ES-
H
------
A
--
R
A
R
F
A
A
L
A
G
A
Y
V
S
F
A
L
A
-----
H
R
E
L
L
---
A
L
M
Y
G
---
N
---
K
--------------
H
-
A
---
P
G
----
A
A
S
Q
V
V
E
A
-
G
H
A
S
M
D
L
T
V
R
I
V
T
E
A
Q
A
A
-----
G
D
I
---------
G
P
G
-
D
A
S
R
I
-
A
L
V
-
A
F
A
T
F
H
G
I
A
-
T
-
L
A
A
G
GML
D
---
G
-
A
P
V
D
E
V
V
T
A
A
S
D
T
F
W
R
G
L
A
-----------
109
HHSearch
56.04
14%
-35
- C2 -
-
5EYR
1
ETHR_MYCTU
A:
[26-218]
----------
G
D
D
R
E
L
A
I
L
A
T
A
E
N
L
L
E
D
R
P
L
A
D
I
S
V
D
D
L
A
K
G
A
G
I
S
R
P
T
F
Y
F
Y
F
P
S
K
E
A
V
L
L
T
L
L
D
R
V
V
N
Q
A
D
M
A
L
Q
T
L
-----
A
E
NPADT
D
------
R
--
E
N
M
W
R
T
G
I
N
V
F
F
E
T
F
G
S
-----
H
K
A
V
T
---
R
A
G
Q
A
---
A
---
R
----------
A
---
T
-
S
---
V
E
V
A
E
L
W
----
S
T
F
-
M
Q
K
W
I
A
Y
T
A
A
V
I
D
A
E
R
D
R
-----
G
A
A
---------
P
R
T
L
P
A
H
E
L
-
A
-
T
A
L
N
L
M
N
E
R
T
L
-
F
A
S
F
A
GE--
Q
---
P
S
V
P
E
A
R
V
L
D
T
L
V
H
I
W
V
T
S
I
Y
G
E
---------
88
HHSearch
55.38
15%
-6
- C2 -
-
3PAS
2
?
D:
[1-192]
-----
G
M
R
Q
R
D
D
S
K
R
I
A
F
L
E
A
T
V
R
E
V
A
D
H
G
F
S
A
T
S
V
G
K
I
A
K
A
A
G
L
S
P
A
T
L
Y
I
Y
Y
E
D
K
E
Q
L
L
L
A
T
F
Y
Y
V
S
D
Q
V
I
D
A
A
L
D
S
-----
F
SRGK--
D
------
L
--
R
E
G
L
R
R
Q
W
H
T
L
F
R
I
G
L
E
-----
R
P
E
L
F
---
R
Y
H
E
T
---
F
---
T
----------
H
SAW
M
-
T
---
P
E
----
I
----
Q
A
R
-
N
E
S
R
A
A
N
L
L
N
A
V
D
Q
G
K
Q
S
-----
G
L
I
---------
K
P
V
-
P
F
P
L
L
E
T
-
F
-
M
F
R
P
I
Y
H
L
V
-
Q
-
R
C
-----
L
QGS
F
-
E
G
T
D
E
H
I
E
L
A
F
N
M
A
W
D
A
V
A
D
R
---------
104
HHSearch
53.85
13%
-35
- C2 -
-
5MXK
3
?
A:
[22-214]
----------
G
D
D
R
E
L
A
I
L
A
T
A
E
N
L
L
E
D
R
P
L
A
D
I
S
V
D
D
L
A
K
G
A
G
I
S
R
P
T
F
Y
F
Y
F
P
S
K
E
A
V
L
L
T
L
L
D
R
V
V
N
Q
A
D
M
A
L
Q
T
L
-----
A
E
N
PADT
D
------
R
--
E
N
M
W
R
T
G
I
N
V
F
F
E
T
F
G
S
-----
H
K
A
V
T
---
R
A
G
Q
A
---
A
---
R
----------
A
---
T
-
S
---
V
E
V
A
E
L
W
----
S
T
F
-
M
Q
K
W
I
A
Y
T
A
A
V
I
D
A
E
R
D
R
-----
G
A
A
---------
P
R
T
L
P
A
H
E
L
-
A
-
T
A
L
N
L
M
N
E
R
T
L
F
A
-
S
F
A
GE--
Q
P--
S
-
V
P
E
A
R
V
L
D
T
L
V
H
I
W
V
T
S
I
Y
G
E
---------