@TOME V2.3
(Mar 2018)

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3D Common Core:

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Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : B0VUA1: (2017-12-17 )
MQAIEKRNSLFNSLTQAVFDKNMANFWLQKINPLWSVQHGLVQIVKKEFVAHDTVSLTLKCNRLVKMGAAGQHHPVIVEIAGRRYERTYSLTQIDAEHLRLTVKKVADGIVSNWFIAESKIGDVFELGQPYGDMQQNIQTPKLIMLAAGSGITPMLSLITAIKQSQQLEKTQVQLLYWVKQRSDAAFTEYFEQVAEQNPNFSYQVFYTQETPNDERLNAEHLALVDGIENSTVYACGPSGFISTVEQLFEKAPTVLTEAFSLINESSADDIGYVNVTLTQSNKVIAIPKGQSILVSLEHEGLKPTHGCRMGICNKCVCSKTQGSTRNLLNGSQNTEPSQLLKICVNSAQSDLVIDL

Atome Classification :

(20 SA) -----------------------------------------------------------------------------------------------------------------.........10........20........30........40........50...--.....60.---.......--70---------...-----.....-.80----.-----------------------------....--...90.-.-...--.----------.-.100..-..--------.---------.---------------..------.110-.-......120.......130--------------.-------.-------------.-..--.--.140-..-.....150.......160.......-170.......180.--..---....190.....------------..200......-.210-..------.---------.----------.---.----------..------.220...--.----....230-----.----.......240.-......250--...----......260.......270.......280.......290.......300.......310.......320.......330.......340.......-350-.....
(Atome) (Ident) (Tito) (Num) (QMean) (Ligand) (Uniprot) -----------------------------------------------------------------------------------------------------------------MQAIEKRNSLFNSLTQAVFDKNMANFWLQKINPLWSVQHGLVQIVKKEFVAHDT--VSLTLKCN---RLVKMGA--A----------GQH-----HPVIV-EIA----G-----------------------------RRYE--RTYSLT-Q-IDA--E----------H-LR--LT-VK--------K---------V---------------AD------GIVS-N-WFIAESKIGDVFELGQPYG--------------D-------M-------------Q-QN--I--QTPK-LI-MLAAGSGITPMLSLITAIKQSQQLE-KTQVQLLYWVKQRS--DA---AFTEYFEQVAEQ------------NPNFSYQVFYT-QE---TP------N---------D----------E---R----------LN------AE-HLAL--V----DGIENS------T----VYACGPSGFIS-TVEQLFE----KAP----TVLTEAFSLINESSADDIGYVNVTLTQSNKVIAIPKGQSILVSLEHEGLKPTHGCRMGICNKCVCSKTQGSTRNLLNGSQNTEPSQLLKICVNSAQ-S-D-LVIDL
1 PsiBlast_PDB 71.8325% 27 - C3 - - 2PIA PDR_BURCE A:[11-321] ----------------------------------------------------------------------------------------------------------------------------------------------------------LKIASKEKIARDI--WSFELTDP---QGAPLPPFEA----------GAN-----LTVAV-PNG----S-----------------------------RR-----TYSLC-N-DSQ--E----------R-NRYVIA-VK--------R---------D---------------SN------GRGG-SISFIDDTSEGDAVEVSLPRN--------------E-------F-------------P-LD--K--RAKS-FI-LVAGGIGITPMLSMARQLRA----E-GLRSFRLYYLTR----DP---EGTAFFDELTSD------------EWRSDVKIHHD-HG---DP------T--------------------------------------------K-AFDF--W----SVFEKS------KPAQHVYCCGPQALMD-TVRDMTG----HWPSG--TVHFESFGATNTNARENTPFT-VRLSRSGTSFEIPANRSILEVLRDANVRVPSSCESGTCGSCKTALCSGEADHRDMVLRDDEKGTQIMVCVSRAK-SAE-LVLDL
77 Fugue 66.1020% 31 - C3 - - 1GVH HMP_ECOLI A:[1-396] MLDAQTIATVKATIPLLVETGPKLTAHFYDRMFTHNPELKEIFNMSNQRNGDQREALFNAIAAYASNIENLPALLPAVEKIAQKHTSFQIKPEQYNIVGEHLLATLDEMFSPGQEVLDAWGKAYGVLANVFINREAEIYNENASKAGGWEGTRDFRIVAKTPRSALI--TSFELEPV---DGGAVAE--Y----------RPG-----QYLGV-WLKPEGFP-----------------------------HQEI--RQYSLTRK-PDG--K----------G-YR--IA-VK--------R---------E---------------EG------GQVS-N-WLHNHANVGDVVKLVAPAG--------------D-------F-------------F-MA--V--ADDTPVT-LISAGVGQTPMLAMLDTLAKAGH---TAQVNWFHAAENGD--VH---AFADEVKELGQS------------LPRFTAHTWYR-QP---SE------A---------D----------R---AKGQFDSEGL-MD------LS-KLEG--A----FSDPTM------Q----FYLCGPVGFMQ-FTAKQLV----D--------------------------------------------------------------LGVKQENIHYECFGPHKVL-------------------------------
52 HHSearch 65.6425% 35 - C3 - - 2PIA PDR_BURCE A:[3-321] -------------------------------------------------------------------------------------------------------------------------------------------------PQEDG-FLRLKIASKEKIARDI--WSFELTDPQGAPLP-PFE--A----------GAN-----LTVAV-PN------------------------------------GSR--RTYSLC-N-DSQERN----------R-YV--IA-VK--------R---------D---------------SN------GRGGSI-SFIDDTSEGDAVEVSLPRN--------------E-------F-------------P-LD--K--RAKS-FI-LVAGGIGITPMLSMARQLRAE--G--LRSFRLYYLTRDPE--GT---AFFDELTSDEWR-------------SDVKIHHDHG-DP---T----------------------------K---A----------FD------FWSVFE--------KSKPAQ------H----VYCCGPQALMD-TVRDMTG----HWPSG--TVHFESFGATNTNAR-ENTPFTVRLSRSGTSFEIPANRSILEVLRDANVRVPSSCESGTCGSCKTALCSGEADHRDMVLRDDEKGTQIMVCVSRAK-S-AELVLDL
19 PsiBlast_PDB 60.0423% 5 - C3 - - 1UMK NB5R3_HUMAN A:[19-254] ----------------------------------------------------------------------------------------------------------------------------------------------------------LRLIDREIISHDTRRFRFALPSP---QHILGLP--V----------GQH-----IYLSA-RID----G-----------------------------NLVV--RPYTPI-S-SDD--DKGFVDLVIKVY-FK--DT-HP--------K---------F---------------PA------GGKM-S-QYLESMQIGDTIEFRGPSGLLVYQGKGKFAIRPD-------K-------------K-SNPII--RTVK-SVGMIAGGTGITPMLQVIRAIMKDPD-D-HTVCHLLFANQTEK--DI---LLRPELEELRNK------------H-SARFKLWYTLDR---AP------EAWDYGQGFVN----------E---E----------MI------RD-HLPP--P----E--EEP------L----VLMCGPPPMI------------------------------------------------------------------------------------------------------------------------------
71 HHSearch 59.6318% 12 - C3 - - 2R6H ? C:[9-290] -------------------------------------------------------------------------------------------------------------------------------------------------------EWECEVLSNKNVSTFI--KEFVVKLPEG-ETM-NFK--S----------GSY-----AQIKI-PKY----NIRYADYDIQDRFRGDWDKMDAWSLTCKNEEETV--RAYSMA-N-YPAEGN----------I-IT--LN-VR--------I---------ATPPFDRAANKWKAGIKP------GISS-S-YIF-SLKPGDKVMMSGPYG--------------D-------F-------------H-IQ--D--TDAE-ML-YIGGGAGMAPLRAQILHLFRTL-KT-GRKVSYWYGARSKN--EI---FYEEDFREIERE------------FPNFKFHIALS-DP---QP------EDNWTGY---V----------G---F----------IH------QV-IYDN--YLKDHDAPEDI------E----YYMCGPGPMAN-AVKGMLE----NLGVPRNMLFFDDFG--------------------------------------------------------------------------------------------------
60 HHSearch 58.5119% 6 - C3 - - 4P6V NQRF_VIBCH F:[132-408] -------------------------------------------------------------------------------------------------------------------------------------------------------KWECTVISNDNKATFI--KELKLAIPDG-ESV-PFR--A----------GGY-----IQIEA-PAH----HVKYADFDVPEKYRGDWDKFNLFRYESKVDEPII--RAYSMA-N-YPEEFG----------I-IM--LN-VR--------IATPPPNNPNV---------------PP------GQMS-S-YIW-SLKAGDKCTISGPFG--------------E-------F-------------F-AK--D--TDAE-MV-FIGGGAGMAPMRSHIFDQLKRL-KS-KRKMSYWYGARSKR--EM---FYVEDFDGLAAE------------NDNFVWHCALS-DP---QPEDNWTGY---------T----------G---F----------IH------NV-LYEN--YLKDHEAPEDC------E----YYMCGPPMMNA-AVINMLK----NLGVEEENILLDDFGG-------------------------------------------------------------------------------------------------
70 HHSearch 58.2321% 30 - C3 - - 2EIX ? A:[11-234] -------------------------------------------------------------------------------------------------------------------------------------------------------YKKFMLREKQIINHNT--RLFRFNLHHPEDVV-GLP--I----------GQH-----MSVKA-TVD----G-----------------------------KEIY--RPYTPV-S-SDDEKG----------Y-FD--LI-IK--------V---------Y---------------EK------GQMS-Q-YID-HLNPGDFLQVRGPKG--------------Q-------F-------------D-YK--PN-MVKE-MG-MIAGGTGITPMLQVARAIIKN--PKEKTIINLIFANVNED--DI---LLRTELDDMAKK------------YSNFKVYYVLN-NP---PAGWTG--G---------V----------G---F----------VS------AD-MIKQ--HFS--PPSSDI------K----VMMCGPPMMNK-AMQGHLE----TLG--------------------------------------------------------------------------------------------------------------
10 PsiBlast_PDB 56.5226% 40 - C3 - - 4G1V ? A:[153-371] -----------------------------------------------------------------------------------------------------------------------------------------------------------EITAKEYVASDI--VEFTVKP-------KFGS--GIELESLPITPGQYITVNTHPIRQ-E------------------------------------NQYDALRHYSLC-S-AST--K----------NGLR--FA-VK--------M---------E---------------AARENFPAGLVS-E-YLHKDAKVGDEIKLSAPAG--------------DFAINKELI-------------H-QN-----EVP--LV-LLSSGVGVTPLLAML-----EEQVK-CNPNRPIYWIQSSY--DEKTQAFKKHVDELLAE------------CANVDKIIVHT-DT---EP-------------------------------L----------IN------AA-FLK---E----KSPAHA------D----VYTCGSLAFMQ-AM--------------------------------------------------------------------------------------------------------------------------
57 HHSearch 56.2122% -28 * C3 * - 1KRH BENC_ACIAD A:[108-337] -------------------------------------------------------------------------------------------------------------------------------------------------------HFEGTLARVENLSDST--ITFDIQLDDGQPDI-HFL--A----------GQY-----VNVTL-PG-----------------------------------TTET--RSYSFS-S-QPGN-R----------L-TG--FV-VR--------N---------V---------------PQ------GKMS-E-YLSVQAKAGDKMSFTGPFG--------------S-------F-------------Y-LR--D--VKRP-VL-MLAGGTGIAPFLSMLQVLEQK--GS-EHPVRLVFGVTQDC--DL---VALEQLDALQQK------------LPWFEYRTVVA-HA---ESQHE---R---------K----------G---Y----------VT------GH-IEYD--W----LNGGEV------D----VYLCGPVPMVE-AVRSWLD----TQGIQPANFLFEKFSA-------------------------------------------------------------------------------------------------
9 PsiBlast_PDB 55.4726% 43 - C3 - - 4G1B ? A:[153-371] -----------------------------------------------------------------------------------------------------------------------------------------------------------EITAKEYVASDI--VEFTVKP-------KFGS--GIELESLPITPGQYITVNTHPIRQ-E------------------------------------NQYDALRHYSLC-S-AST--K----------NGLR--FA-VK--------M---------E---------------AARENFPAGLVS-E-YLHKDAKVGDEIKLSAPAG--------------DFAINKELI-------------H-QN-----EVP--LV-LLSSGVGVTPLLAML-----EEQVK-CNPNRPIYWIQSSY--DEKTQAFKKHVDELLAE------------CANVDKIIVHT-DT---EP-------------------------------L----------IN------AA-FLK---E----KSPAHA------D----VYTCGSLAFMQ-AM--------------------------------------------------------------------------------------------------------------------------
69 HHSearch 53.4721% -29 - C3 - - 4WQM TMOF_PSEME A:[102-326] -------------------------------------------------------------------------------------------------------------------------------------------------------RFSTRVVSKRFLSDEM--FELRLEAE---QKV-VFS--P----------GQY-----FMVDV-PEL------------------------------------GT--RAYSAA-N-PVDG-N----------T-LT--LI-VK--------A---------V---------------PN------GKVS-C-ALAN--ETIETLQLDGPYG--------------L-------S-------------V-LK--TA-DETQ-SV-FIAGGSGIAPMVSMVNTLIAQ--GY-EKPITVFYGSRLEA--EL---EAAETLFGWKEN------------L---KLINVSS-SV---VGNSESSYP---------T----------G---Y----------VH------EI--IPE--YM---EGLLGA------E----FYLCGPPQMIN-SVQKLLMI---ENKVPFEAIHFDRFF--------------------------------------------------------------------------------------------------
72 Fugue 53.4616% 4 - C3 - - 1EP3 PYRK_LACLM B:[2-262] ----------------------------------------------------------------------------------------------------------------------------------------------------SQLQEMMTVVSQREVAYNI--FEMVLKGT---LVDEMDL--P----------GQF-----LHLAV-PNG----A-----------------------------MLLR--RPISIS-S-WDK--R----------A-KT--CTILY--------R---------I---------------GD------ETTG-T-YKLSKLESGAKVDVMGPLG--------------NGFP----V-------------A-EV--T--STDK-IL-IIGGGIGVPPLYELAKQLEKT-----GCQMTILLGFASEN--VK-------ILENEFSN------------LKNVTLKIATD-DG---SY------G---------T----------K---G----------HV------GM-LMNE--I----DF-EVD------A----LYTCGAPAMLK-AVAKKYD----QLE-------------------------RLYISMESRM----------------------ACGIGACYACVEHDKEDESHALK-------------VCEDGPVFL-G-KQLSL
62 HHSearch 52.7324% 30 - C3 - - 1GVH HMP_ECOLI A:[148-394] --------------------------------------------------------------------------------------------------------------------------------------------------GWEG-TRDFRIVAKTPRSALI--TSFELEPVDGGAVA-EYR--P----------GQY-----LGVWL-KPE----GFP---------------------------HQEI--RQYSLT-R-KPDG-K----------G-YR--IA-VK--------R---------E---------------EG------GQVS-N-WLHNHANVGDVVKLVAPAG--------------D-------F-------------F-MA--VA-DDTP-VT-LISAGVGQTPMLAMLDTLAKA--GH-TAQVNWFHAAENGD--VH---AFADEVKELGQS------------LPRFTAHTWYR-QP---SE------ADRA------K----------G---Q----------FDSEGLMDLS-KLEG--A----FSDPTM------Q----FYLCGPVGFMQ-FTAKQLV----DLGVKQENIHYECFGPHK-----------------------------------------------------------------------------------------------
8 PsiBlast_PDB 50.6326% -9 - C3 - - 1KRH BENC_ACIAD A:[141-336] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A----------GQY-------VNV-TLP----G-----------------------------TTET--RSYSFS-S-QPG--N----------R-LTG-FV-VR--------N---------V---------------PQ------GKMS-E-YLSVQAKAGDKMSFTGPFG--------------S-------F-------------YLRD--V--KRP--VL-MLAGGTGIAPFLSMLQVLE--QKGS-EHPVRLVFGVTQDC--DL---VALEQLDALQQK------------LPWFEYRTVVA-HA---ES------Q---------H----------E---R----------KGYV----TG-HIEYDWL----NGGE-V------D----VYLCGPVPMVE-AVRSWLDTQGIQPA----NFLFEKFS--------------------------------------------------------------------------------------------------
55 HHSearch 49.5515% -5 - C3 - - 1EP3 PYRK_LACLM B:[5-242] -------------------------------------------------------------------------------------------------------------------------------------------------------QEMMTVVSQREVAYNI--FEMVLKGTL--VDE-MDL--P----------GQF-----LHLAV-PNG----A-----------------------------MLLR--RPISIS-S-WDKRAK----------T-CT--IL-YR--------I---------G---------------DE------TTGT-Y-KLS-KLESGAKVDVMGPLG--------------NG------F-------------P-VA--EVTSTDK-IL-IIGGGIGVPPLYELAKQLEKT--G---CQMTILLGFASEN--VK---ILENEFSNLKN----------------VTLKIATD-DG---SYG-----T---------K----------G---H----------VG------M--LMNE--I-----DFEVD------A----LYTCGAPAMLK-AVAKKYD----QLE-----------------------R--L----------------------YISMESRMACGIGACYACVEHDKEDE-----------------------------------
16 PsiBlast_PDB 49.5425% -44 - C3 - - 4P6V - NQRF_VIBCH F:[248-380] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YIWSLKAGDKCTISGPFG--------------E-------F-------------F-AK--D--TDAE-MV-FIGGGAGMAPMRSHI--FDQLKRL--KSKRKMSYWYGARSKREM---FYVEDFDGLAAE------------NDNFVWHCALS-DP---QP------E---------D----------N---WTGYTGFIHNVLY------EN-YLKD--H----EAPEDC------E----YYMCGP----------------------------------------------------------------------------------------------------------------------------------
2 PsiBlast_PDB 49.4829% -5 - C3 - - 1GVH HMP_ECOLI A:[204-377] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RQYSLT-RKPDG--K----------G-YR--IA-VK--------R---------E---------------EG------GQVS-N-WLHNHANVGDVVKLVAPAG--------------DFF-----M-------------A-VA--D--DTP--VT-LISAGVGQTPMLAMLDTLAKAGH---TAQVNWFHAAENGD--VH---AFADEVKELGQS------------LPRFTAHTWYR-QP---SE------A---------D----------RAKGQ----------FD------SE-GLMD--L----SKLEGAFSDPTMQ----FYLCGPVGFMQFTAKQLVD---------------------------------------------------------------------------------------------------------------------
17 PsiBlast_PDB 49.1024% -38 - C3 - - 4WQM TMOF_PSEME A:[106-309] -----------------------------------------------------------------------------------------------------------------------------------------------------------RVVSKRFLSDEM--FELRLEAE---QKVVF-S--P----------GQY-----FMVDVPELG----T-----------------------------RAYS-----AAN-P-VDG--N----------T-LT--LI-VK--------A---------V---------------PN------GKVS-C-ALANETI--ETLQLDGPYGL-------------S-------V-------------L-KT--A--DETQ-SV-FIAGGSGIAPMVSMVNTLI-AQGYE-KP-ITVFYGSRLEA--EL---EAAETLFGWKENLKLINVSSSVVGNSESSYPTGYV-HE-----------------------------------------------II------PE-YM---------EGLLGA------E----FYLCGPPQMIN-SVQKLL----------------------------------------------------------------------------------------------------------------------
13 PsiBlast_PDB 48.8024% 22 - C3 - - 2CND A:[46-248] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GKH-----IFVCA-TIE----G-----------------------------KLCM--RAYTPT-S-MVD--EIG--------H-FD--LL-VKVYFKNEHPK---------F---------------PN------GGLM-T-QYLDSLPVGSYIDVKGPLG--------------H-------VEYTGRGSFVINGKQ-RN--A--R--R-LA-MICGGSGITPMYQIIQAVLRDQPED-HTEMHLVYANRTED--DI---LLRDELDRWAAE------------YPD-RLKVWYV-IDQVKRP------E---------EGWKYSVGFVTE---A----------VL------RE-HVP--------EGGDDT------L----ALACGPPPMI------------------------------------------------------------------------------------------------------------------------------
14 PsiBlast_PDB 48.5525% -46 - C3 - - 4UAJ NQRF_VIBC3 A:[124-256] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YIWSLKAGDKCTISGPFG--------------E-------F-------------F-AK--D--TDAE-MV-FIGGGAGMAPMRSHI--FDQLKRL--KSKRKMSYWYGARSKREM---FYVEDFDGLAAE------------NDNFVWHCALS-DP---QP------E---------D----------N---WTGYTGFIHNVLY------EN-YLKD--H----EAPEDC------E----YYMCGP----------------------------------------------------------------------------------------------------------------------------------