@TOME V2.3
(Mar 2018)
Ref.
-
-
Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
Show Ligands of Templates
Complexes Affinity Score
Main Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Complexes Tab
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : B0VUA1: (2017-12-17 )
MQAIEKRNSLFNSLTQAVFDKNMANFWLQKINPLWSVQHGLVQIVKKEFVAHDTVSLTLKCNRLVKMGAAGQHHPVIVEIAGRRYERTYSLTQIDAEHLRLTVKKVADGIVSNWFIAESKIGDVFELGQPYGDMQQNIQTPKLIMLAAGSGITPMLSLITAIKQSQQLEKTQVQLLYWVKQRSDAAFTEYFEQVAEQNPNFSYQVFYTQETPNDERLNAEHLALVDGIENSTVYACGPSGFISTVEQLFEKAPTVLTEAFSLINESSADDIGYVNVTLTQSNKVIAIPKGQSILVSLEHEGLKPTHGCRMGICNKCVCSKTQGSTRNLLNGSQNTEPSQLLKICVNSAQSDLVIDL
Atome Classification :
(20 SA)
-----------------------------------------------------------------------------------------------------------------.........10........20........30........40........50...--.....60.---.......--70---------...-----.....-.80----.-----------------------------....--...90.-.-...--.----------.-.100..-..--------.---------.---------------..------.110-.-......120.......130--------------.-------.-------------.-..--.--.140-..-.....150.......160.......-170.......180.--..---....190.....------------..200......-.210-..------.---------.----------.---.----------..------.220...--.----....230-----.----.......240.-......250--...----......260.......270.......280.......290.......300.......310.......320.......330.......340.......-350-.....
(Atome)
(Ident)
(Tito)
(Num)
(QMean)
(Ligand)
(Uniprot)
-----------------------------------------------------------------------------------------------------------------M
Q
A
I
E
K
R
N
S
L
F
N
S
L
T
Q
A
V
F
D
K
N
M
A
N
F
W
L
Q
KI
N
P
L
W
S
V
Q
H
G
L
V
Q
I
V
K
K
E
F
VAHD
T
--
V
S
L
T
L
K
C
N
---
R
L
V
KMGA--A----------GQH-----H
P
V
I
V
-
E
IA----G-----------------------------R
R
Y
E
--
R
T
YS
L
T
-Q-I
D
A
--
E
----------
H
-
L
R
--
L
T
-
V
K
--------
K
---------
V
---------------
A
D
------
G
I
V
S-
N
-
W
F
I
AESKIG
D
V
F
E
LGQPY
G
--------------
D
-------
M
-------------
Q
-QN--I--QT
P
K
-
L
I
-
M
L
AAGSG
I
T
P
M
L
S
L
I
T
A
I
K
Q
S
Q
Q
L
E
-
K
T
Q
V
Q
L
L
Y
W
VKQRS--D
A
---
A
F
T
E
Y
F
E
Q
V
A
EQ------------NPN
F
S
Y
Q
V
F
Y
T-QE---TP------N---------D----------E---R----------LN------AE-
H
L
A
L
--
V
----DGIENS------
T
----
V
Y
A
CGPS
G
F
I
S
-
T
V
E
Q
L
F
E
----KA
P
----
T
V
L
T
E
A
F
S
L
INESSAD
D
I
G
Y
V
N
V
T
L
TQS
N
K
V
I
A
IPKG
Q
S
I
L
V
S
L
EHEGLKPTHGC
R
M
G
IC
N
K
CVCSKTQGSTRNLLNGSQNT
E
P
S
Q
L
L
K
I
C
V
NSAQ-S-
D
-
L
V
I
DL
1
PsiBlast_PDB
71.83
25%
27
- C3 -
-
2PIA
2
PDR_BURCE
A:
[11-321]
----------------------------------------------------------------------------------------------------------------------------------------------------------
L
K
I
A
S
K
E
K
I
A
R
D
I
--
W
S
F
E
L
T
D
P
---
Q
G
A
P
L
P
P
F
E
A
----------
G
A
N
-----
L
T
V
A
V
-
P
N
G
----
S
-----------------------------
R
R
-----
T
Y
S
L
C
-
N
-
D
S
Q
--
E
----------
R
-
N
R
Y
V
I
A
-
V
K
--------
R
---------
D
---------------
S
N
------
G
R
G
G
-
S
I
S
F
I
D
D
T
S
E
G
D
A
V
E
V
S
L
P
R
N
--------------
E
-------
F
-------------
P
-
L
D
--
K
--
R
A
K
S
-
F
I
-
L
V
A
G
G
I
G
I
T
P
M
L
S
M
A
R
Q
L
R
A
----
E
-
G
L
R
S
F
R
L
Y
Y
L
T
R
----
D
P
---
E
G
T
A
F
F
D
E
L
T
S
D
------------
E
W
R
S
D
V
K
I
H
H
D
-
H
G
---
D
P
------
T
--------------------------------------------
K
-
A
F
D
F
--
W
----
S
V
F
E
K
S
------
K
PA
Q
H
V
Y
C
C
G
P
Q
A
L
M
D
-
T
V
R
D
M
T
G
----
H
W
P
SG--
T
V
H
F
E
S
F
G
A
T
N
T
N
A
R
E
N
T
P
F
T
-
V
R
L
S
R
S
G
T
S
F
E
I
P
A
N
R
S
I
L
E
V
L
R
D
A
N
V
R
V
P
S
S
C
E
S
G
T
C
G
S
C
K
T
A
L
C
S
G
E
A
D
H
R
D
M
V
L
R
D
D
E
K
G
T
Q
I
M
V
C
V
S
R
A
K
-
S
A
E
-
L
V
L
D
L
77
Fugue
66.10
20%
31
- C3 -
-
1GVH
2
HMP_ECOLI
A:
[1-396]
MLD
A
Q
T
I
A
T
V
K
A
T
I
P
L
L
V
E
T
G
P
K
L
T
A
H
F
Y
D
R
M
F
T
H
N
PELKEIFNMSNQRNG
D
Q
R
E
A
L
F
N
A
I
A
A
Y
A
S
N
IENLPAL
L
P
A
V
E
K
I
A
Q
K
H
T
S
F
QIK
P
E
Q
Y
N
I
V
G
E
H
L
L
A
T
L
D
E
M
FSPG
Q
E
V
L
D
A
W
G
K
A
Y
G
V
L
A
N
V
F
I
N
R
E
A
E
I
Y
N
E
N
A
S
K
A
G
G
W
E
G
T
R
D
F
R
I
V
A
K
T
P
R
S
A
L
I
--
T
S
F
E
L
E
P
V
---
D
G
G
A
V
A
E
--
Y
----------
R
P
G
-----
Q
Y
L
G
V
-
W
L
K
P
EGF
P
-----------------------------
H
Q
E
I
--
R
Q
Y
S
L
T
R
K
-
P
D
G
--
K
----------
G
-
Y
R
--
I
A
-
V
K
--------
R
---------
E
---------------
E
G
------
G
Q
V
S
-
N
-
W
L
H
N
H
A
N
V
G
D
V
V
K
L
V
A
P
A
G
--------------
D
-------
F
-------------
F
-
M
A
--
V
--
A
D
D
T
P
V
T
-
L
I
S
A
G
V
G
Q
T
P
M
L
A
M
L
D
T
L
A
K
A
G
H
---
T
A
Q
V
N
W
F
H
A
A
E
N
G
D
--
V
H
---
A
F
A
D
E
V
K
E
L
G
Q
S
------------
L
P
R
F
T
A
H
T
W
Y
R
-
Q
P
---
S
E
------
A
---------
D
----------
R
---
A
K
GQFDSEGL-
M
D
------
L
S
-
K
L
E
G
--
A
----
F
S
D
P
T
M
------
Q
----
F
Y
L
C
G
P
V
G
F
M
Q
-
F
T
A
K
Q
L
V
----
D
--------------------------------------------------------------
L
G
V
K
Q
E
N
I
H
Y
E
C
F
G
P
H
K
V
L
-------------------------------
52
HHSearch
65.64
25%
35
- C3 -
-
2PIA
2
PDR_BURCE
A:
[3-321]
-------------------------------------------------------------------------------------------------------------------------------------------------
P
Q
E
D
G
-
F
L
R
L
K
I
A
S
K
E
K
I
A
R
D
I
--
W
S
F
E
L
T
D
P
QGA
P
L
P
-
P
F
E
--
A
----------
G
A
N
-----
L
T
V
A
V
-
P
N
------------------------------------
G
S
R
--
R
T
Y
S
L
C
-
N
-
D
S
Q
ER
N
----------
R
-
Y
V
--
I
A
-
V
K
--------
R
---------
D
---------------
S
N
------
G
R
G
G
S
I
-
S
F
I
D
D
T
S
E
G
D
A
V
E
V
S
L
P
R
N
--------------
E
-------
F
-------------
P
-
L
D
--
K
--
R
A
K
S
-
F
I
-
L
V
A
G
G
I
G
I
T
P
M
L
S
M
A
R
Q
L
R
A
E
--
G
--
L
R
S
F
R
L
Y
Y
L
T
R
D
P
E
--
G
T
---
A
F
F
D
E
L
T
S
D
E
W
R
-------------
S
D
V
K
I
H
H
D
H
G
-
D
P
---
T
----------------------------
K
---
A
----------
F
D
------
F
W
S
V
F
E
--------
K
S
K
P
A
Q
------
H
----
V
Y
C
C
G
P
Q
A
L
M
D
-
T
V
R
D
M
T
G
----
H
W
P
SG--
T
V
H
F
E
S
F
G
A
T
N
T
N
A
R
-
E
N
T
P
F
T
V
R
L
S
R
S
G
T
S
F
E
I
P
A
N
R
S
I
L
E
V
L
R
D
A
N
V
R
V
P
S
S
C
E
S
G
T
C
G
S
C
K
T
A
L
C
S
G
E
A
D
H
R
D
M
V
L
R
D
D
E
K
G
T
Q
I
M
V
C
V
S
R
A
K
-
S
-
A
E
L
V
L
D
L
19
PsiBlast_PDB
60.04
23%
5
- C3 -
-
1UMK
1
NB5R3_HUMAN
A:
[19-254]
----------------------------------------------------------------------------------------------------------------------------------------------------------
L
R
L
I
D
R
E
I
I
S
H
D
T
R
R
F
R
F
A
L
P
S
P
---
Q
H
I
L
G
L
P
--
V
----------
G
Q
H
-----
I
Y
L
S
A
-
R
I
D
----
G
-----------------------------
N
L
V
V
--
R
P
Y
T
P
I
-
S
-
S
D
D
--
D
KG
F
V
D
L
V
I
K
V
Y
-
F
K
--
D
T
-
H
P
--------
K
---------
F
---------------
P
A
------
G
G
K
M
-
S
-
Q
Y
L
E
S
M
Q
I
G
D
T
I
E
F
R
G
P
S
G
LLVYQGKG
K
F
A
I
R
P
D
-------
K
-------------
K
-
S
N
P
I
I
--
R
T
V
K
-
S
V
G
M
I
A
G
G
T
G
I
T
P
M
L
Q
V
I
R
A
I
M
K
D
P
D
-
D
-
H
T
V
C
H
L
L
F
A
N
Q
T
E
K
--
D
I
---
L
L
R
P
E
L
E
E
L
R
N
K
------------
H
-
S
A
R
F
K
L
W
Y
T
L
D
R
---
A
P
------
E
AWDYGQGFV
N
----------
E
---
E
----------
M
I
------
R
D
-
H
L
P
P
--
P
----
E
--
E
E
P
------
L
----
V
L
M
C
G
P
P
P
M
I
------------------------------------------------------------------------------------------------------------------------------
71
HHSearch
59.63
18%
12
- C3 -
-
2R6H
1
?
C:
[9-290]
-------------------------------------------------------------------------------------------------------------------------------------------------------
E
W
E
C
E
V
L
S
N
K
N
V
S
T
F
I
--
K
E
F
V
V
K
L
P
EG-
E
T
M
-
N
F
K
--
S
----------
G
S
Y
-----
A
Q
I
K
I
-
P
K
Y
----
N
I
R
YAD
Y
D
I
Q
DRFR
G
D
W
D
K
M
DAWS
L
T
C
K
N
E
E
E
T
V
--
R
A
Y
S
M
A
-
N
-
Y
P
A
EG
N
----------
I
-
I
T
--
L
N
-
V
R
--------
I
---------
A
TPPFDRAANKWK
A
G
I
K
P
------
G
I
S
S
-
S
-
Y
I
F
-
S
L
K
P
G
D
K
V
M
M
S
G
P
Y
G
--------------
D
-------
F
-------------
H
-
I
Q
--
D
--
T
D
A
E
-
M
L
-
Y
I
G
G
G
A
G
M
A
P
L
R
A
Q
I
L
H
L
F
R
T
L
-
K
T
-
G
R
K
V
S
Y
W
Y
G
A
R
S
K
N
--
E
I
---
F
Y
E
E
D
F
R
E
I
E
R
E
------------
F
P
N
F
K
F
H
I
A
L
S
-
D
P
---
Q
P
------
E
DNWTGY---
V
----------
G
---
F
----------
I
H
------
Q
V
-
I
Y
D
N
--
Y
LKDH
D
A
P
E
D
I
------
E
----
Y
Y
M
C
G
P
G
P
M
A
N
-
A
V
K
G
M
L
E
----
N
L
G
VPRN
M
L
F
F
D
D
F
G
--------------------------------------------------------------------------------------------------
60
HHSearch
58.51
19%
6
- C3 -
-
4P6V
1
NQRF_VIBCH
F:
[132-408]
-------------------------------------------------------------------------------------------------------------------------------------------------------
K
W
E
C
T
V
I
S
N
D
N
K
A
T
F
I
--
K
E
L
K
L
A
I
P
DG-
E
S
V
-
P
F
R
--
A
----------
G
G
Y
-----
I
Q
I
E
A
-
P
A
H
----
H
V
K
YADFDVPEKYR
G
D
W
D
K
F
NLFR
Y
E
S
K
V
D
E
P
I
I
--
R
A
Y
S
M
A
-
N
-
Y
P
E
EF
G
----------
I
-
I
M
--
L
N
-
V
R
--------
I
ATPPPNNPN
V
---------------
P
P
------
G
Q
M
S
-
S
-
Y
I
W
-
S
L
K
A
G
D
K
C
T
I
S
G
P
F
G
--------------
E
-------
F
-------------
F
-
A
K
--
D
--
T
D
A
E
-
M
V
-
F
I
G
G
G
A
G
M
A
P
M
R
S
H
I
F
D
Q
L
K
R
L
-
K
S
-
K
R
K
M
S
Y
W
Y
G
A
R
S
K
R
--
E
M
---
F
Y
V
E
D
F
D
G
L
A
A
E
------------
N
D
N
F
V
W
H
C
A
L
S
-
D
P
---
Q
P
EDNWTG
Y
---------
T
----------
G
---
F
----------
I
H
------
N
V
-
L
Y
E
N
--
Y
LKDH
E
A
P
E
D
C
------
E
----
Y
Y
M
C
G
P
P
M
M
N
A
-
A
V
I
N
M
L
K
----
N
L
G
VEEE
N
I
L
L
D
D
F
G
G
-------------------------------------------------------------------------------------------------
70
HHSearch
58.23
21%
30
- C3 -
-
2EIX
4
?
A:
[11-234]
-------------------------------------------------------------------------------------------------------------------------------------------------------
Y
K
K
F
M
L
R
E
K
Q
I
I
N
H
N
T
--
R
L
F
R
F
N
L
H
HPE
D
V
V
-
G
L
P
--
I
----------
G
Q
H
-----
M
S
V
K
A
-
T
V
D
----
G
-----------------------------
K
E
I
Y
--
R
P
Y
T
P
V
-
S
-
S
D
D
EK
G
----------
Y
-
F
D
--
L
I
-
I
K
--------
V
---------
Y
---------------
E
K
------
G
Q
M
S
-
Q
-
Y
I
D
-
H
L
N
P
G
D
F
L
Q
V
R
G
P
K
G
--------------
Q
-------
F
-------------
D
-
Y
K
--
P
N-
M
V
K
E
-
M
G
-
M
I
A
G
G
T
G
I
T
P
M
L
Q
V
A
R
A
I
I
K
N
--
P
K
E
K
T
I
I
N
L
I
F
A
N
V
N
E
D
--
D
I
---
L
L
R
T
E
L
D
D
M
A
K
K
------------
Y
S
N
F
K
V
Y
Y
V
L
N
-
N
P
---
P
A
GWTG--
G
---------
V
----------
G
---
F
----------
V
S
------
A
D
-
M
I
K
Q
--
H
FS--
P
P
S
S
D
I
------
K
----
V
M
M
C
G
P
P
M
M
N
K
-
A
M
Q
G
H
L
E
----
T
L
G
--------------------------------------------------------------------------------------------------------------
10
PsiBlast_PDB
56.52
26%
40
- C3 -
-
4G1V
1
?
A:
[153-371]
-----------------------------------------------------------------------------------------------------------------------------------------------------------
E
I
T
A
K
E
Y
V
A
S
D
I
--
V
E
F
T
V
K
P
-------
K
F
G
S
--
G
IELES
L
P
I
T
P
G
Q
Y
I
T
V
N
T
H
P
I
R
Q
-
E
------------------------------------
N
Q
Y
D
A
L
R
H
Y
S
L
C
-
S
-
A
S
T
--
K
----------
N
G
L
R
--
F
A
-
V
K
--------
M
---------
E
---------------
A
A
RENFPA
G
L
V
S
-
E
-
Y
L
H
K
D
A
K
V
G
D
E
I
K
L
S
A
P
A
G
--------------
D
FAINKEL
I
-------------
H
-
Q
N
-----
E
V
P
--
L
V
-
L
L
S
S
G
V
G
V
T
P
L
L
A
M
L
-----
E
E
Q
V
K
-
C
N
P
N
R
P
I
Y
W
I
Q
S
S
Y
--
D
E
KTQ
A
F
K
K
H
V
D
E
L
L
A
E
------------
C
A
N
V
D
K
I
I
V
H
T
-
D
T
---
E
P
-------------------------------
L
----------
I
N
------
A
A
-
F
L
K
---
E
----
K
S
P
A
H
A
------
D
----
V
Y
T
C
G
S
L
A
F
M
Q
-
A
M
--------------------------------------------------------------------------------------------------------------------------
57
HHSearch
56.21
22%
-28
* C3 *
-
1KRH
1
BENC_ACIAD
A:
[108-337]
-------------------------------------------------------------------------------------------------------------------------------------------------------
H
F
E
G
T
L
A
R
V
E
N
L
S
D
S
T
--
I
T
F
D
I
Q
L
D
DGQ
P
D
I
-
H
F
L
--
A
----------
G
Q
Y
-----
V
N
V
T
L
-
P
G
-----------------------------------
T
T
E
T
--
R
S
Y
S
F
S
-
S
-
Q
P
G
N-
R
----------
L
-
T
G
--
F
V
-
V
R
--------
N
---------
V
---------------
P
Q
------
G
K
M
S
-
E
-
Y
L
S
V
Q
A
K
A
G
D
K
M
S
F
T
G
P
F
G
--------------
S
-------
F
-------------
Y
-
L
R
--
D
--
V
K
R
P
-
V
L
-
M
L
A
G
G
T
G
I
A
P
F
L
S
M
L
Q
V
L
E
Q
K
--
G
S
-
E
H
P
V
R
L
V
F
G
V
T
Q
D
C
--
D
L
---
V
A
L
E
Q
L
D
A
L
Q
Q
K
------------
L
P
W
F
E
Y
R
T
V
V
A
-
H
A
---
E
S
QHE---
R
---------
K
----------
G
---
Y
----------
V
T
------
G
H
-
I
E
Y
D
--
W
----
L
N
G
G
E
V
------
D
----
V
Y
L
C
G
P
V
P
M
V
E
-
A
V
R
S
W
L
D
----
T
Q
G
IQPA
N
F
L
F
E
K
F
S
A
-------------------------------------------------------------------------------------------------
9
PsiBlast_PDB
55.47
26%
43
- C3 -
-
4G1B
1
?
A:
[153-371]
-----------------------------------------------------------------------------------------------------------------------------------------------------------
E
I
T
A
K
E
Y
V
A
S
D
I
--
V
E
F
T
V
K
P
-------
K
F
G
S
--
G
IELESLPITP
G
Q
Y
I
T
V
N
T
H
P
I
R
Q
-
E
------------------------------------
N
Q
Y
D
A
L
R
H
Y
S
L
C
-
S
-
A
S
T
--
K
----------
N
G
L
R
--
F
A
-
V
K
--------
M
---------
E
---------------
A
A
RENFPA
G
L
V
S
-
E
-
Y
L
H
K
D
A
K
V
G
D
E
I
K
L
S
A
P
A
G
--------------
D
FAINKEL
I
-------------
H
-
Q
N
-----
E
V
P
--
L
V
-
L
L
S
S
G
V
G
V
T
P
L
L
A
M
L
-----
E
E
Q
V
K
-
C
N
P
N
R
P
I
Y
W
I
Q
S
S
Y
--
D
E
KTQ
A
F
K
K
H
V
D
E
L
L
A
E
------------
C
A
N
V
D
K
I
I
V
H
T
-
D
T
---
E
P
-------------------------------
L
----------
I
N
------
A
A
-
F
L
K
---
E
----
K
S
P
A
H
A
------
D
----
V
Y
T
C
G
S
L
A
F
M
Q
-
A
M
--------------------------------------------------------------------------------------------------------------------------
69
HHSearch
53.47
21%
-29
- C3 -
-
4WQM
3
TMOF_PSEME
A:
[102-326]
-------------------------------------------------------------------------------------------------------------------------------------------------------
R
F
S
T
R
V
V
S
K
R
F
L
S
D
E
M
--
F
E
L
R
L
E
A
E
---
Q
K
V
-
V
F
S
--
P
----------
G
Q
Y
-----
F
M
V
D
V
-
P
E
L
------------------------------------
G
T
--
R
A
Y
S
A
A
-
N
-
P
V
D
G-
N
----------
T
-
L
T
--
L
I
-
V
K
--------
A
---------
V
---------------
P
N
------
G
K
V
S
-
C
-
A
L
A
N
--
E
T
I
E
T
L
Q
L
D
G
P
Y
G
--------------
L
-------
S
-------------
V
-
L
K
--
T
A
-
D
E
T
Q
-
S
V
-
F
I
A
G
G
S
G
I
A
P
M
V
S
M
V
N
T
L
I
A
Q
--
G
Y
-
E
K
P
I
T
V
F
Y
G
S
R
L
E
A
--
E
L
---
E
A
A
E
T
L
F
G
W
K
E
N
------------
L
---
K
L
I
N
V
S
S
-
S
V
---
V
G
NSESSY
P
---------
T
----------
G
---
Y
----------
V
H
------
E
I
--
I
P
E
--
Y
M---
E
G
L
L
G
A
------
E
----
F
Y
L
C
G
P
P
Q
M
I
N
-
S
V
Q
K
L
L
M
I---
E
N
K
VPFE
A
I
H
F
D
R
F
F
--------------------------------------------------------------------------------------------------
72
Fugue
53.46
16%
4
- C3 -
-
1EP3
2
PYRK_LACLM
B:
[2-262]
----------------------------------------------------------------------------------------------------------------------------------------------------
S
Q
L
Q
E
M
M
T
V
V
S
Q
R
E
V
A
Y
N
I
--
F
E
M
V
L
K
G
T
---
L
V
D
E
M
D
L
--
P
----------
G
Q
F
-----
L
H
L
A
V
-
P
N
G
----
A
-----------------------------
M
L
L
R
--
R
P
I
S
I
S
-
S
-
W
D
K
--
R
----------
A
-
K
T
--
C
T
I
L
Y
--------
R
---------
I
---------------
G
D
------
E
T
T
G
-
T
-
Y
K
L
S
K
L
E
S
G
A
K
V
D
V
M
G
P
L
G
--------------
N
GFP----
V
-------------
A
-
E
V
--
T
--
S
T
D
K
-
I
L
-
I
I
G
G
G
I
G
V
P
P
L
Y
E
L
A
K
Q
L
E
K
T
-----
G
C
Q
M
T
I
L
L
G
F
A
S
E
N
--
V
K
-------
I
L
E
N
E
F
S
N
------------
L
K
N
V
T
L
K
I
A
T
D
-
D
G
---
S
Y
------
G
---------
T
----------
K
---
G
----------
H
V
------
G
M
-
L
M
N
E
--
I
----
D
F
-
E
V
D
------
A
----
L
Y
T
C
G
A
P
A
M
L
K
-
A
V
A
K
K
Y
D
----
Q
L
E
-------------------------
R
L
Y
I
S
M
E
S
R
M
----------------------
A
C
G
I
G
A
C
Y
A
C
V
E
H
D
K
E
D
E
S
H
A
L
K
-------------
V
C
E
D
G
P
V
F
L
-
G
-
K
Q
L
S
L
62
HHSearch
52.73
24%
30
- C3 -
-
1GVH
2
HMP_ECOLI
A:
[148-394]
--------------------------------------------------------------------------------------------------------------------------------------------------
G
W
E
G
-
T
R
D
F
R
I
V
A
K
T
P
R
S
A
L
I
--
T
S
F
E
L
E
P
V
DG
G
A
V
A
-
E
Y
R
--
P
----------
G
Q
Y
-----
L
G
V
W
L
-
K
P
E
----
G
FP---------------------------
H
Q
E
I
--
R
Q
Y
S
L
T
-
R
-
K
P
D
G-
K
----------
G
-
Y
R
--
I
A
-
V
K
--------
R
---------
E
---------------
E
G
------
G
Q
V
S
-
N
-
W
L
H
N
H
A
N
V
G
D
V
V
K
L
V
A
P
A
G
--------------
D
-------
F
-------------
F
-
M
A
--
V
A
-
D
D
T
P
-
V
T
-
L
I
S
A
G
V
G
Q
T
P
M
L
A
M
L
D
T
L
A
K
A
--
G
H
-
T
A
Q
V
N
W
F
H
A
A
E
N
G
D
--
V
H
---
A
F
A
D
E
V
K
E
L
G
Q
S
------------
L
P
R
F
T
A
H
T
W
Y
R
-
Q
P
---
S
E
------
A
D
R
A
------
K
----------
G
---
Q
----------
F
D
SEGLMD
L
S
-
K
L
E
G
--
A
----
F
S
D
P
T
M
------
Q
----
F
Y
L
C
G
P
V
G
F
M
Q
-
F
T
A
K
Q
L
V
----
D
L
G
VKQE
N
I
H
Y
E
C
F
G
P
H
K
-----------------------------------------------------------------------------------------------
8
PsiBlast_PDB
50.63
26%
-9
- C3 -
-
1KRH
1
BENC_ACIAD
A:
[141-336]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
A
----------
G
Q
Y
-------
V
N
V
-
T
L
P
----
G
-----------------------------
T
T
E
T
--
R
S
Y
S
F
S
-
S
-
Q
P
G
--
N
----------
R
-
L
T
G
-
F
V
-
V
R
--------
N
---------
V
---------------
P
Q
------
G
K
M
S
-
E
-
Y
L
S
V
Q
A
K
A
G
D
K
M
S
F
T
G
P
F
G
--------------
S
-------
F
-------------
Y
L
R
D
--
V
--
K
R
P
--
V
L
-
M
L
A
G
G
T
G
I
A
P
F
L
S
M
L
Q
V
L
E
--
Q
K
G
S
-
E
H
P
V
R
L
V
F
G
V
T
Q
D
C
--
D
L
---
V
A
L
E
Q
L
D
A
L
Q
Q
K
------------
L
P
W
F
E
Y
R
T
V
V
A
-
H
A
---
E
S
------
Q
---------
H
----------
E
---
R
----------
K
G
YV----
T
G
-
H
I
E
Y
DW
L
----
N
G
G
E
-
V
------
D
----
V
Y
L
C
G
P
V
P
M
V
E
-
A
V
R
S
W
L
D
T
Q
GI
Q
P
A
----
N
F
L
F
E
K
F
S
--------------------------------------------------------------------------------------------------
55
HHSearch
49.55
15%
-5
- C3 -
-
1EP3
2
PYRK_LACLM
B:
[5-242]
-------------------------------------------------------------------------------------------------------------------------------------------------------
Q
E
M
M
T
V
V
S
Q
R
E
V
A
Y
N
I
--
F
E
M
V
L
K
G
T
L--
V
D
E
-
M
D
L
--
P
----------
G
Q
F
-----
L
H
L
A
V
-
P
N
G
----
A
-----------------------------
M
L
L
R
--
R
P
I
S
I
S
-
S
-
W
D
K
RA
K
----------
T
-
C
T
--
I
L
-
Y
R
--------
I
---------
G
---------------
D
E
------
T
T
G
T
-
Y
-
K
L
S
-
K
L
E
S
G
A
K
V
D
V
M
G
P
L
G
--------------
N
G------
F
-------------
P
-
V
A
--
E
VT
S
T
D
K
-
I
L
-
I
I
G
G
G
I
G
V
P
P
L
Y
E
L
A
K
Q
L
E
K
T
--
G
---
C
Q
M
T
I
L
L
G
F
A
S
E
N
--
V
K
---
I
L
E
N
E
F
S
N
L
K
N
----------------
V
T
L
K
I
A
T
D
-
D
G
---
S
Y
G-----
T
---------
K
----------
G
---
H
----------
V
G
------
M
--
L
M
N
E
--
I
-----
D
F
E
V
D
------
A
----
L
Y
T
C
G
A
P
A
M
L
K
-
A
V
A
K
K
Y
D
----
Q
L
E
-----------------------
R
--
L
----------------------
Y
I
S
M
E
S
R
M
A
C
G
I
G
A
C
Y
A
C
V
E
H
D
K
E
D
E
-----------------------------------
16
PsiBlast_PDB
49.54
25%
-44
- C3 -
-
4P6V
-
NQRF_VIBCH
F:
[248-380]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Y
I
W
S
L
K
A
G
D
K
C
T
I
S
G
P
F
G
--------------
E
-------
F
-------------
F
-
A
K
--
D
--
T
D
A
E
-
M
V
-
F
I
G
G
G
A
G
M
A
P
M
R
S
H
I
--
F
D
Q
L
K
R
L
--
K
S
K
R
K
M
S
Y
W
Y
G
A
R
S
KR
E
M
---
F
Y
V
E
D
F
D
G
L
A
A
E
------------
N
D
N
F
V
W
H
C
A
L
S
-
D
P
---
Q
P
------
E
---------
D
----------
N
---
W
TGYTGF
I
H
N
V
L
Y
------
E
N
-
Y
L
K
D
--
H
----
E
A
P
E
D
C
------
E
----
Y
Y
M
C
G
P
----------------------------------------------------------------------------------------------------------------------------------
2
PsiBlast_PDB
49.48
29%
-5
- C3 -
-
1GVH
1
HMP_ECOLI
A:
[204-377]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
R
Q
Y
S
L
T
-
R
K
P
D
G
--
K
----------
G
-
Y
R
--
I
A
-
V
K
--------
R
---------
E
---------------
E
G
------
G
Q
V
S
-
N
-
W
L
H
N
H
A
N
V
G
D
V
V
K
L
V
A
P
A
G
--------------
D
F
F
-----
M
-------------
A
-
V
A
--
D
--
D
T
P
--
V
T
-
L
I
S
A
G
V
G
Q
T
P
M
L
A
M
L
D
T
L
A
K
A
G
H
---
T
A
Q
V
N
W
F
H
A
A
E
N
G
D
--
V
H
---
A
F
A
D
E
V
K
E
L
G
Q
S
------------
L
P
R
F
T
A
H
T
W
Y
R
-
Q
P
---
S
E
------
A
---------
D
----------
R
A
K
G
Q
----------
F
D
------
S
E
-
G
L
M
D
--
L
----
S
K
L
E
G
A
FSDPT
M
Q
----
F
Y
L
C
G
P
V
G
F
M
Q
F
T
A
K
Q
L
V
D
---------------------------------------------------------------------------------------------------------------------
17
PsiBlast_PDB
49.10
24%
-38
- C3 -
-
4WQM
3
TMOF_PSEME
A:
[106-309]
-----------------------------------------------------------------------------------------------------------------------------------------------------------
R
V
V
S
K
R
F
L
S
D
E
M
--
F
E
L
R
L
E
A
E
---
Q
K
V
V
F
-
S
--
P
----------
G
Q
Y
-----
F
M
V
D
V
P
E
L
G
----
T
-----------------------------
R
A
Y
S
-----
A
A
N
-
P
-
V
D
G
--
N
----------
T
-
L
T
--
L
I
-
V
K
--------
A
---------
V
---------------
P
N
------
G
K
V
S
-
C
-
A
L
A
N
E
T
I
--
E
T
L
Q
L
D
G
P
Y
G
L-------------
S
-------
V
-------------
L
-
K
T
--
A
--
D
E
T
Q
-
S
V
-
F
I
A
G
G
S
G
I
A
P
M
V
S
M
V
N
T
L
I
-
A
Q
G
Y
E
-
K
P
-
I
T
V
F
Y
G
S
R
L
E
A
--
E
L
---
E
A
A
E
T
L
F
G
W
K
E
N
L
K
L
I
N
V
S
SSVVG
N
S
E
S
S
Y
P
T
G
Y
V
-
H
E
-----------------------------------------------
I
I
------
P
E
-
Y
M
---------
E
G
L
L
G
A
------
E
----
F
Y
L
C
G
P
P
Q
M
I
N
-
S
V
Q
K
L
L
----------------------------------------------------------------------------------------------------------------------
13
PsiBlast_PDB
48.80
24%
22
- C3 -
-
2CND
1
A:
[46-248]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
K
H
-----
I
F
V
C
A
-
T
I
E
----
G
-----------------------------
K
L
C
M
--
R
A
Y
T
P
T
-
S
-
M
V
D
--
E
IG--------
H
-
F
D
--
L
L
-
V
K
VYFKNEHP
K
---------
F
---------------
P
N
------
G
G
L
M
-
T
-
Q
Y
L
D
S
L
P
V
G
S
Y
I
D
V
K
G
P
L
G
--------------
H
-------
V
EYTGRG
S
F
V
I
NG
K
Q
-
R
N
--
A
--
R
--
R
-
L
A
-
M
I
C
G
G
S
G
I
T
P
M
Y
Q
I
I
Q
A
V
L
R
D
Q
P
E
D
-
H
T
E
M
H
L
V
Y
A
N
R
T
E
D
--
D
I
---
L
L
R
D
E
L
D
R
W
A
A
E
------------
Y
P
D
-
R
L
K
V
W
Y
V
-
I
D
QVK
R
P
------
E
---------
E
GWKYSVGFVT
E
---
A
----------
V
L
------
R
E
-
H
V
P
--------
E
G
G
D
D
T
------
L
----
A
L
A
C
G
P
P
P
M
I
------------------------------------------------------------------------------------------------------------------------------
14
PsiBlast_PDB
48.55
25%
-46
- C3 -
-
4UAJ
1
NQRF_VIBC3
A:
[124-256]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Y
I
W
S
L
K
A
G
D
K
C
T
I
S
G
P
F
G
--------------
E
-------
F
-------------
F
-
A
K
--
D
--
T
D
A
E
-
M
V
-
F
I
G
G
G
A
G
M
A
P
M
R
S
H
I
--
F
D
Q
L
K
R
L
--
K
S
K
R
K
M
S
Y
W
Y
G
A
R
S
KR
E
M
---
F
Y
V
E
D
F
D
G
L
A
A
E
------------
N
D
N
F
V
W
H
C
A
L
S
-
D
P
---
Q
P
------
E
---------
D
----------
N
---
W
TGYTGF
I
H
N
V
L
Y
------
E
N
-
Y
L
K
D
--
H
----
E
A
P
E
D
C
------
E
----
Y
Y
M
C
G
P
----------------------------------------------------------------------------------------------------------------------------------