@TOME V2.3
(Mar 2018)
Ref.
-
-
Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
Show Ligands of Templates
Complexes Affinity Score
Main Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Complexes Tab
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : B0VUC5: (2017-12-18 )
MQQMWTDIDEYIDSHLIPEDPRLDFALKNTDEHGFSNHLAVAPNQGMFLQMLIQMNKCKRVLEIGTFAAYSTIWLGRALPEDGYLLTIEGRDTHAEMAQKNIDHANLPVKVDLKLGRAADVLSAIDPQSIEPFDFIFIDADKQGYPEYLELSLKFSKSGTIIVLDNVIRAGAILNPENKKPSIEGIRETFKALENHPQILSCTALQTVGSKGHDGFAIAIVK
Atome Classification :
(21 SA)
.........10........20........30........40........50........60........70........80........90........100......-.110.......120..-...-.-.130........140.......150.......160.......170...--...-----.180---........190.......200...-....210.......220-
(Atome)
(Ident)
(Tito)
(Num)
(QMean)
(Ligand)
(Uniprot)
M
Q
Q
M
W
T
D
I
D
E
Y
I
D
S
HLIPEDPRL
D
F
A
LKNTDEHGFSN
H
L
A
VAPNQ
G
M
F
L
Q
M
L
I
Q
M
N
K
C
K
R
V
L
E
I
G
T
F
A
A
Y
S
T
I
W
LGRALPED
G
Y
L
L
T
I
EGR
D
T
H
A
E
M
A
Q
KNIDHANL
P
-
V
K
V
D
L
KLG
R
A
A
D
V
L
S
A-IDP-Q-SIE-P
F
D
F
I
F
I
DADKQG
Y
P
E
Y
L
E
L
S
L
K
FSKS
G
T
I
I
V
LDNVIRAGAILN--PEN-----KKP----
S
I
E
G
I
R
E
T
F
K
A
L
ENHP
Q
I
L
S
C
T
A
L
-
Q
T
VGSKGHD
G
F
A
I
A
I
VK-
56
HHSearch
89.59
44%
-106
- C2 -
-
3TFW
-
?
A:
[6-223]
M
Q
Q
Q
W
S
A
V
D
N
Y
L
I
K
A
L
I
P
G
D
P
V
L
D
R
V
L
E
N
N
H
R
A
G
L
P
-
A
H
D
V
A
A
N
Q
G
Q
F
L
A
L
L
V
R
L
T
Q
A
K
R
I
L
E
I
G
T
L
G
G
Y
S
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M
A
R
E
L
P
A
D
G
Q
L
L
T
L
E
A
D
A
H
H
A
Q
V
A
R
E
N
L
Q
L
A
G
V
D
-
Q
R
V
T
L
R
E
G
P
A
L
Q
S
L
E
S
-
L
G
----
E
C
P
-
A
F
D
L
I
F
I
D
A
D
K
P
N
N
P
H
Y
L
R
W
A
L
R
Y
S
R
P
G
T
L
I
I
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N
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E
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N
--
P
Q
S
-----
A
D
E
----
R
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I
E
M
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G
A
E
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A
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A
L
-
Q
T
V
G
T
K
G
W
D
G
F
T
L
A
W
V
N
-
3
PsiBlast_PDB
89.33
44%
-106
- C2 -
-
3TFW
-
?
A:
[7-222]
-
Q
Q
Q
W
S
A
V
D
N
Y
L
I
K
A
L
I
P
G
D
P
V
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D
R
V
L
E
N
N
H
R
A
G
L
P
A
H
-
D
V
A
A
N
Q
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Q
F
L
A
L
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R
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Q
A
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M
A
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G
Q
L
L
T
L
E
A
D
A
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A
Q
V
A
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E
N
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L
A
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D
-
Q
R
V
T
L
R
E
G
P
A
L
Q
S
L
E
S
-
L
G
----
E
C
P
-
A
F
D
L
I
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I
D
A
D
K
P
N
N
P
H
Y
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A
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R
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E
V
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N
--
P
Q
S
-----
A
D
E
----
R
V
Q
G
V
R
Q
F
I
E
M
M
G
A
E
P
R
-
L
T
A
T
A
L
-
Q
T
V
G
T
K
G
W
D
G
F
T
L
A
W
V
--
2
PsiBlast_PDB
88.94
45%
-104
- C2 -
-
3DUW
1
?
A:
[5-222]
--
E
T
W
T
A
V
D
Q
Y
V
S
D
V
L
I
P
K
D
S
T
L
E
E
V
L
Q
V
N
A
A
A
N
L
P
A
H
-
D
V
S
P
T
Q
G
K
F
L
Q
L
L
V
Q
I
Q
G
A
R
N
I
L
E
I
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T
L
G
G
Y
S
T
I
W
L
A
R
G
L
S
S
G
G
R
V
V
T
L
E
A
S
E
K
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A
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I
A
R
S
N
I
E
R
A
N
L
N
-
D
R
V
E
V
R
T
G
L
A
L
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S
L
Q
Q
-
I
E
N
-
E
-
K
Y
E
-
P
F
D
F
I
F
I
D
A
D
K
Q
N
N
P
A
Y
F
E
W
A
L
K
L
S
R
P
G
T
V
I
I
G
D
N
V
V
R
E
G
E
V
I
D
--
N
T
S
-----
N
D
P
----
R
V
Q
G
I
R
R
F
Y
E
L
I
A
A
E
P
R
V
-
S
A
T
A
L
-
Q
T
V
G
S
K
G
Y
D
G
F
I
M
A
V
V
K
-
1
PsiBlast_PDB
88.73
45%
-112
- C2 -
-
3DUL
-
?
A:
[6-222]
---
T
W
T
A
V
D
Q
Y
V
S
D
V
L
I
P
K
D
S
T
L
E
E
V
L
Q
V
N
A
A
A
N
L
P
A
H
-
D
V
S
P
T
Q
G
K
F
L
Q
L
L
V
Q
I
Q
G
A
R
N
I
L
E
I
G
T
L
G
G
Y
S
T
I
W
L
A
R
G
L
S
S
G
G
R
V
V
T
L
E
A
S
E
K
H
A
D
I
A
R
S
N
I
E
R
A
N
L
N
-
D
R
V
E
V
R
T
G
L
A
L
D
S
L
Q
Q
-
I
E
N
-
E
-
K
Y
E
-
P
F
D
F
I
F
I
D
A
D
K
Q
N
N
P
A
Y
F
E
W
A
L
K
L
S
R
P
G
T
V
I
I
G
D
N
V
V
R
---------------------------
I
R
R
F
Y
E
L
I
A
A
E
P
R
V
-
S
A
T
A
L
-
Q
T
V
G
S
K
G
Y
D
G
F
I
M
A
V
V
K
-
57
HHSearch
85.54
44%
-106
- C2 -
-
3TFW
-
?
B:
[6-223]
M
Q
Q
Q
W
S
A
V
D
N
Y
L
I
K
A
L
I
P
G
D
P
V
L
D
R
V
L
E
N
N
H
R
A
G
L
P
-
A
H
D
V
A
A
N
Q
G
Q
F
L
A
L
L
V
R
L
T
Q
A
K
R
I
L
E
I
G
T
L
G
G
Y
S
T
I
W
M
A
R
E
L
P
A
D
G
Q
L
L
T
L
E
A
D
A
H
H
A
Q
V
A
R
E
N
L
Q
L
A
G
V
D
-
Q
R
V
T
L
R
E
G
P
A
L
Q
S
L
E
S
-
L
G
----
E
C
P
-
A
F
D
L
I
F
I
D
A
D
K
P
N
N
P
H
Y
L
R
W
A
L
R
Y
S
R
P
G
T
L
I
I
G
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N
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R
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E
V
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N
--
P
Q
S
-----
A
D
E
----
R
V
Q
G
V
R
Q
F
I
E
M
M
G
A
E
P
R
L
T
-
A
T
A
L
-
Q
T
V
G
T
K
G
W
D
G
F
T
L
A
W
V
N
-
58
HHSearch
85.34
43%
-108
- C2 -
-
3DUW
1
?
A:
[5-222]
--
E
T
W
T
A
V
D
Q
Y
V
S
D
V
L
I
P
K
D
S
T
L
E
E
V
L
Q
V
N
A
A
A
N
L
P
-
A
H
D
V
S
P
T
Q
G
K
F
L
Q
L
L
V
Q
I
Q
G
A
R
N
I
L
E
I
G
T
L
G
G
Y
S
T
I
W
L
A
R
G
L
S
S
G
G
R
V
V
T
L
E
A
S
E
K
H
A
D
I
A
R
S
N
I
E
R
A
N
L
N
-
D
R
V
E
V
R
T
G
L
A
L
D
S
L
Q
Q
-
I
E
N
-
E
-
K
Y
E
-
P
F
D
F
I
F
I
D
A
D
K
Q
N
N
P
A
Y
F
E
W
A
L
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L
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G
T
V
I
I
G
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N
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V
R
E
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E
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I
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--
N
T
S
-----
N
D
P
----
R
V
Q
G
I
R
R
F
Y
E
L
I
A
A
E
P
R
V
S
-
A
T
A
L
Q
T
V
G
-
S
K
G
Y
D
G
F
I
M
A
V
V
K
-
42
Fugue
69.86
26%
-109
- C2 -
-
4OA5
1
?
A:
[16-227]
-----
S
K
Q
D
E
Y
L
N
K
L
F
A
V
D
T
E
G
A
L
K
A
H
K
T
A
P
S
E
--
L
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A
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E
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M
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A
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G
H
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N
C
K
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E
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D
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E
A
L
A
Q
L
N
T
-
L
K
E
-
M
-
A
---
P
F
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--
E
H
P
-----
T
E
K
VS
S
N
A
H
A
S
M
R
A
F
N
D
E
L
A
N
K
E
K
------
Y
-
L
S
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I
I
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E
G
M
M
V
S
I
K
L
T
60
HHSearch
68.00
26%
-87
- C2 -
-
5LOG
2
?
A:
[8-220]
----
T
Q
S
V
L
Q
Y
I
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D
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S
V
R
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I
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R
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A
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S
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V----
G
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N
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D
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-
L
S
M
L
-
P
I
A
-----
D
G
L
T
L
A
R
K
R
-
55
HHSearch
66.84
27%
-77
* C2 *
-
3CBG
2
?
A:
[22-232]
-----
P
S
L
Y
S
Y
L
Q
S
I
S
A
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S
F
Y
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-
A
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E
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--
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-----
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----
Q
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A
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D
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R
-
I
S
V
I
-
P
L
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-----
D
G
M
T
L
A
L
K
K
-
67
HHSearch
65.06
31%
-91
- C2 -
-
3R3H
-
?
B:
[8-220]
---
L
T
P
E
L
Y
K
Y
L
L
D
I
S
L
R
E
H
P
A
L
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A
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R
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E
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A
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-
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A
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-
L
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-
G
E
H
-
Q
F
D
F
I
F
I
D
A
D
K
T
N
Y
L
N
Y
Y
E
L
A
L
K
L
V
T
P
K
G
L
I
A
I
D
N
I
F
W
D
G
K
V
I
D
--
P
N
D
-----
T
S
G
----
Q
T
R
E
I
K
K
L
N
Q
V
I
K
N
D
S
R
V
F
-
V
S
L
L
-
A
I
A
-----
D
G
M
F
L
V
Q
P
I
-
4
PsiBlast_PDB
64.98
34%
-86
- C2 -
-
3R3H
-
?
A:
[23-204]
------------------
E
H
P
A
L
A
A
L
R
K
E
T
S
T
M
E
L
A
N
-
M
Q
V
A
P
E
Q
A
Q
F
M
Q
M
L
I
R
L
T
R
A
K
K
V
L
E
L
G
T
F
T
G
Y
S
A
L
A
M
S
L
A
L
P
D
D
G
Q
V
I
T
C
D
I
N
E
G
W
T
K
H
A
H
P
Y
W
R
E
A
K
Q
E
-
H
K
I
K
L
R
L
G
P
A
L
D
T
L
H
S
-
L
L
N
-
E
-
G
G
E
H
Q
F
D
F
I
F
I
D
A
D
K
T
N
Y
L
N
Y
Y
E
L
A
L
K
L
V
T
P
K
G
L
I
A
I
D
N
I
F
W
D
G
K
V
I
D
--
P
N
D
-----
T
S
G
----
Q
T
R
E
I
K
K
L
N
Q
V
I
K
N
D
S
R
V
F
------------------------
62
HHSearch
64.95
26%
-70
- C2 -
-
5X7F
-
Y1220_MYCTU
A:
[31-235]
-----
E
S
L
W
A
H
A
E
G
-
S
I
S
E
D
V
I
L
A
G
A
R
E
R
A
T
D
I
G
A
G
---
A
V
T
P
A
V
G
A
L
L
C
L
L
A
K
L
S
G
G
K
A
V
A
E
V
G
T
G
A
G
V
S
G
L
W
L
L
S
G
M
R
D
D
G
V
L
T
T
I
D
I
E
P
E
H
L
R
L
A
R
Q
A
F
A
E
A
G
I
G
P
S
R
T
R
L
I
S
G
R
A
Q
E
V
L
T
R
-
L
A
-----
D
A
-
S
Y
D
L
V
F
I
D
A
D
P
I
D
Q
P
D
Y
V
A
E
G
V
R
L
L
R
S
G
G
V
I
V
V
H
R
A
A
L
G
---------
A
-----
R
D
A
----
E
V
I
A
V
R
E
A
A
R
L
I
A
E
D
E
R
L
T
-
P
A
L
V
-
P
L
G
-----
D
G
V
L
A
A
V
R
D
-
61
HHSearch
64.80
26%
-78
- C2 -
-
5LHM
4
?
A:
[8-220]
----
T
Q
S
V
L
Q
Y
I
R
D
S
S
V
R
D
N
D
I
L
R
D
L
R
E
E
T
S
K
L
P
----
M
Q
I
P
P
E
Q
G
Q
L
L
S
L
L
V
R
L
I
G
A
R
K
T
L
E
V
G
V
F
T
G
Y
S
T
L
C
T
A
L
A
L
P
A
D
G
R
V
I
A
C
D
L
S
E
E
W
V
S
I
A
R
R
Y
W
Q
R
A
G
V
A
-
D
R
I
E
V
R
L
G
D
A
H
H
S
L
E
A
-
L
V
G
-
S
E
H
R
G
-
T
F
D
L
A
F
I
D
A
D
K
E
S
Y
D
F
Y
Y
E
H
A
L
R
L
V
R
P
G
G
L
I
I
L
D
N
T
L
W
S
G
K
V
A
D
--
P
S
V
V----
G
D
P
----
E
T
D
S
L
R
R
I
N
A
K
L
L
T
D
E
R
V
D
-
L
S
M
L
-
P
I
A
-----
D
G
L
T
L
A
R
K
R
-
66
HHSearch
64.61
22%
-92
- C2 -
-
3NTV
-
?
A:
[21-231]
---
M
D
D
L
N
K
K
Y
L
I
D
L
H
Q
H
Q
N
S
S
I
E
V
L
R
E
F
A
E
V
N
E
V
P
---
I
V
D
R
L
T
L
D
L
I
K
Q
L
I
R
M
N
N
V
K
N
I
L
E
I
G
T
A
I
G
Y
S
S
M
Q
F
A
S
I
S
D
-
D
I
H
V
T
T
I
E
R
N
E
T
M
I
Q
Y
A
K
Q
N
L
A
T
Y
H
F
E
-
N
Q
V
R
I
I
E
G
N
A
L
E
Q
F
E
N
-
V
N
-----
D
K
-
V
Y
D
M
I
F
I
D
A
A
K
A
Q
S
K
K
F
F
E
I
Y
T
P
L
L
K
H
Q
G
L
V
I
T
D
N
V
L
Y
H
G
F
V
S
D
--
I
G
I
VRS
R
N
V
R
Q
----
M
V
K
K
V
Q
D
Y
N
E
W
L
I
K
Q
P
G
Y
T
-
T
N
F
L
-
N
I
D
-----
D
G
L
A
I
S
I
K
G
-
25
PsiBlast_CBE
64.32
33%
-166
- C2 -
-
4PCA
4
?
C:
[52-180]
--------------------------------------------
E
G
Q
M
L
Q
L
L
I
R
M
A
G
I
H
S
I
V
E
V
G
T
C
V
G
F
S
A
I
C
M
A
H
A
L
P
S
K
G
H
I
Y
T
I
E
K
D
Y
E
N
V
V
T
A
N
Q
N
I
V
N
C
K
L
E
-
D
K
I
T
V
L
H
G
E
A
L
A
Q
L
N
T
-
L
---
K
-
E
M
A
-
P
F
D
M
I
F
I
D
A
N
K
S
S
Y
L
A
Y
L
N
W
A
K
M
Y
I
R
K
G
G
L
I
V
A
D
N
T
F
L
F
G
S
V
F
D
------------------------------------------------------------
68
HHSearch
63.73
19%
-152
- C2 -
-
3C3P
9
?
A:
[7-209]
----
D
S
R
I
G
A
Y
L
D
G
L
L
P
E
A
D
P
V
V
A
A
M
E
Q
I
A
R
E
R
N
I
P
---
I
V
D
R
Q
T
G
R
L
L
Y
L
L
A
R
I
K
Q
P
Q
L
V
V
V
P
G
D
G
L
G
C
A
S
W
W
F
A
R
A
I
S
I
S
S
R
V
V
M
I
D
P
D
R
D
N
V
E
H
A
R
R
M
L
H
D
N
G
L
I
-
D
R
V
E
L
Q
V
G
D
P
L
G
I
A
A
--
G
------
Q
R
-
D
I
D
I
L
F
M
D
C
D
V
F
N
G
A
D
V
L
E
R
M
N
R
C
L
A
K
N
A
L
L
I
A
V
N
A
L
R
R
G
------------------------
A
L
R
E
F
N
H
H
L
S
R
R
R
D
F
F
-
T
T
I
V
-
P
V
G
-----
N
G
V
L
L
G
Y
R
L
-
65
HHSearch
63.48
22%
-92
- C2 -
-
3NTV
-
?
B:
[23-231]
-----
D
L
N
K
K
Y
L
I
D
L
H
Q
H
Q
N
S
S
I
E
V
L
R
E
F
A
E
V
N
E
V
P
---
I
V
D
R
L
T
L
D
L
I
K
Q
L
I
R
M
N
N
V
K
N
I
L
E
I
G
T
A
I
G
Y
S
S
M
Q
F
A
S
I
S
D
-
D
I
H
V
T
T
I
E
R
N
E
T
M
I
Q
Y
A
K
Q
N
L
A
T
Y
H
F
E
-
N
Q
V
R
I
I
E
G
N
A
L
E
Q
F
E
N
-
V
N
-----
D
K
-
V
Y
D
M
I
F
I
D
A
A
K
A
Q
S
K
K
F
F
E
I
Y
T
P
L
L
K
H
Q
G
L
V
I
T
D
N
V
L
Y
H
G
F
V
S
D
--
I
G
I
VRS
R
N
V
R
Q
----
M
V
K
K
V
Q
D
Y
N
E
W
L
I
K
Q
P
G
Y
T
-
T
N
F
L
-
N
I
D
-----
D
G
L
A
I
S
I
K
G
-
28
PsiBlast_CBE
63.15
33%
-154
- C2 -
-
4OA5
17
?
F:
[53-190]
--------------------------------------------
E
G
Q
M
L
Q
L
L
I
R
M
A
G
I
H
S
I
V
E
V
G
T
C
V
G
F
S
A
I
C
M
A
H
A
L
P
S
K
G
H
I
Y
T
I
E
K
D
Y
E
N
V
V
T
A
N
Q
N
I
V
N
C
K
L
E
-
D
K
I
T
V
L
H
G
E
A
L
A
Q
L
N
T
-
L
---
K
-
E
M
A
-
P
F
D
M
I
F
I
D
A
N
K
S
S
Y
L
A
Y
L
N
W
A
K
M
Y
I
R
K
G
G
L
I
V
A
D
N
T
F
L
F
G
S
V
F
D
EH
P
T
E
-----
K
V
S
----
S
------------------------------------------
26
PsiBlast_CBE
63.14
33%
-168
- C2 -
-
4PCA
2
?
B:
[52-181]
--------------------------------------------
E
G
Q
M
L
Q
L
L
I
R
M
A
G
I
H
S
I
V
E
V
G
T
C
V
G
F
S
A
I
C
M
A
H
A
L
P
S
K
G
H
I
Y
T
I
E
K
D
Y
E
N
V
V
T
A
N
Q
N
I
V
N
C
K
L
E
-
D
K
I
T
V
L
H
G
E
A
L
A
Q
L
N
T
-
L
---
K
-
E
M
A
-
P
F
D
M
I
F
I
D
A
N
K
S
S
Y
L
A
Y
L
N
W
A
K
M
Y
I
R
K
G
G
L
I
V
A
D
N
T
F
L
F
G
S
V
F
D
------------------------------------------------------------
13
PsiBlast_PDB
62.98
33%
-166
- C2 -
-
4PCA
2
?
A:
[52-180]
--------------------------------------------
E
G
Q
M
L
Q
L
L
I
R
M
A
G
I
H
S
I
V
E
V
G
T
C
V
G
F
S
A
I
C
M
A
H
A
L
P
S
K
G
H
I
Y
T
I
E
K
D
Y
E
N
V
V
T
A
N
Q
N
I
V
N
C
K
L
E
-
D
K
I
T
V
L
H
G
E
A
L
A
Q
L
N
T
-
L
---
K
-
E
M
A
-
P
F
D
M
I
F
I
D
A
N
K
S
S
Y
L
A
Y
L
N
W
A
K
M
Y
I
R
K
G
G
L
I
V
A
D
N
T
F
L
F
G
S
V
F
D
------------------------------------------------------------
9
PsiBlast_PDB
58.67
30%
-123
- C2 -
-
5LOG
2
?
A:
[41-179]
--------------------------------------
M
Q
I
P
P
E
Q
G
Q
L
L
S
L
L
V
R
L
I
G
A
R
K
T
L
E
V
G
V
F
T
G
Y
S
T
L
C
T
A
L
A
L
P
A
D
G
R
V
I
A
C
D
L
S
E
E
W
V
S
I
A
R
R
Y
W
Q
R
A
G
V
A
-
D
R
I
E
V
R
L
G
D
A
H
H
S
L
E
A
L
V
G
S
-
E
-
H
R
G
-
T
F
D
L
A
F
I
D
A
D
K
E
S
Y
D
F
Y
Y
E
H
A
L
R
L
V
R
P
G
G
L
I
I
L
D
N
T
L
W
S
G
K
V
A
D
--
P
---------------------------------------------------------