@TOME V2.3
(Mar 2018)
Ref.
-
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Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
Show Ligands of Templates
Complexes Affinity Score
Main Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Complexes Tab
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : B0VUK9: (2017-12-19 )
MGNQPITKNIPPNSKAWDGYPSKVESCNVPKPFCYFQFDRPIAMPYTFMMSAQQWEYALRRNKLEFLLAVRFGMEYDIAKLNEDVLISTGFHTGMYVKFQHYLRKHYQKEAAVLVAIFQSNAFTTRFGTTFAIEDLISLKGAIDDLRIENIMTGAFNISRNNGFGTVINRKMYQQNFDQDYNPTMLKTLAAQGLYPDEIEGIF
Atome Classification :
(19 SA)
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------.........10........20.-----.......30........40.......---------------.50......--------..60........----70........80--.----------..----------.....90.....-----...100.......110.......120.....---..130.------......140.-----......150-....-.--------....160.----..----------------....170.......180------..--......190--.........--200.---------------------------------------------------------------------------------------------------------------------------------------------------------------
(Atome)
(Ident)
(Tito)
(Num)
(QMean)
(Ligand)
(Uniprot)
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MGNQPITKNIPPNSKAWDGYPS-----KVESCNVPK
P
F
C
Y
F
Q
FDRPIAM
P
Y
T
F
---------------
M
M
S
A
Q
Q
W
E
Y
--------
A
L
R
R
N
K
L
E
F
L
L
A
----VRFGMEY
D
I
A
KL--N----------E
D
----------
V
L
I
S
TGFHT
G
M
Y
-----
V
K
F
Q
H
Y
L
R
K
H
Y
Q
K
E
A
A
V
L
V
A
I
FQSN
A
F
T
TRF---GT
T
F
A
I
------
E
D
L
I
S
L
KG
A
I
-----
D
D
L
R
I
E
N
---
I
M
T
G
-
A
--------
F
N
ISRNNG----
F
G
----------------
T
V
I
N
R
K
M
Y
Q
Q
NFDQDY-------
N
P
--
T
M
L
K
T
L
A
----AQGL
Y
P
D
EI--EGIF---------------------------------------------------------------------------------------------------------------------------------------------------------------
16
Fugue
69.76
20%
-23
- C2 -
-
4Q0C
-
BVGS_BORPE
A:
[33-545]
S
Q
E
L
T
LVGKA
A
V
P
D
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EVALDGD
D
W
R
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L
A
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R
V
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G
V
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A
PDIPPF
D
V
T
Y
GE
R
Y
E
G
L
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A
D
Y
M
A
I
I
A
H
N
L
GMQ
A
K
V
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R
Y
PT
R
E
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A
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A
L
E
S
GQID
L
I
G
TVN
G
T
D
G
R
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QS
L
R
L
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VPY
A
A
D
H
P
V
I
V
M
P
IGARHVPASNLAG
Q
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L
A
V
DINYLP
K
E
T
L
A
R
A
YPQ
A
T
L
H
Y
F
PS
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E
Q
A
L
A
A
V
A
Y
GQAD
V
F
I
G
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A
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T
T
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L
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SYFND
V
R
V
V
A
PAH
I
A
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RADN
T
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L
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R
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IP
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--------------------
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----
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E
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----------
D
M
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A
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-----
E
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F
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-
Y
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M
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A
P
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D
A
D
HLD
G
R
T
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A
L
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RNS
A
A
I
P
L
L
Q
R
R
Y
P
Q
-----
A
K
V
V
T
A
D
---
N
P
S
E
-
A
--------
M
L
M
V
A
N
G
Q
----
A
D
----------------
A
V
V
Q
T
Q
I
S
A
S
Y
Y
V
N
R
Y
-------
F
A
--
G
K
L
R
I
A
S
----
A
L
D
L
P
P
A
E
I
--
A
L
A
T
TRGQ
T
E
L
M
S
I
L
N
K
A
L
Y
S
IS
N
D
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A
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I
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W
R
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S
D
G
D
P
R
T
W
Y
A
Y
R
N
E
I
Y
L
E-------------------------------------------------------------------------------------------------------------
12
Fugue
63.89
16%
-45
- C4 -
-
1SSQ
1
CYSE_HAEIN
A:
[1-241]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
N
L
D
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A
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A
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E
P
-----
M
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A
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N
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G
G
A
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A
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---------------
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A
N
P
I
M
P
A
--------
I
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NP
S
I
I
D
C
A
A
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--
R
----------
H
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DPAVELWSTP
L
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-----
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A
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D
V
D
I
---
H
P
A
A
K
I
------
G
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M
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D
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S
I
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Q
G
-
V
--------
T
L
G
G
T
G
K
E
----
S
G
DR
H
P
K
V
R
E
G
V
M
I
G
A
G
A
K
I
L
G
N
I
E
V
G
K
Y
A
K
I
G
A
-------
N
S
--
V
V
L
N
P
V
P
EY
A
T
A
A
G
V
P
A
R
I
V
--
S
------------------------------------------------------------------------------------------------------------------------------------------------------------------
2
HHSearch
57.36
18%
-41
- C4 -
-
1SSQ
1
CYSE_HAEIN
A:
[2-142]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
N
L
D
V
W
Q
H
I
R
Q
-----
E
A
K
E
L
A
E
N
E
P
M
L
A
S
F
F
H
S
T
I
L
K
H
Q
N
L
G
G
A
L
S
Y
L
L
A
N
K
L
ANP
I
M
P
A
I
S
L
R
E
--------
I
I
-
E
E
A
Y
Q
S
N
P
S
----
I
I
D
C
A
A
C
D
I
Q
A
V
--
R
H
RDPAVELWS
T
P
----------
L
L
Y
L
K
G
F
H
A
I
Q
S
-----
Y
R
I
T
H
Y
L
W
N
Q
N
R
K
S
L
A
L
Y
L
Q
N
Q
I
S
V
A
F
D
V
D
I
---
H
P
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
20
Fugue
51.11
17%
-16
- C5 -
-
4K70
1
?
A:
[2-483]
-----------------------------------------------------------------------------------------------------------------PG
S
M
E
A
L
V
R
A
L
E
EADHAV
A
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R
I
L
E
F
F
M
AA
G
R
E
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P
A
G
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A
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A
L
R
L
A
C
R
A
Y
V
E
TGT
C
E
A
A
V
L
A
E
N
L
A
G
L
A
L
W
RLRHDWDEGT
A
P
L
L
E
L
L
G
V
V
N
G
D
D
T
T
A
A
L
T
E
A
GLRTSAEFG
P
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A
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L
V
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C
A
A
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E
A
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A
G
A
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A
D
D
V
L
A
A
--------
P
R
-----
V
V
P
P
E
Q
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A
R
A
L
V
Q
P
R
F
A
T
L
Y
D
M
--
D
F
---------------
V
Q
D
G
L
R
Y
V
A
--------
Q
H
T
N
W
A
L
P
L
A
L
A
----
V
R
Q
M
Q
N
E
G
L
K
P
L
--
T
----------
R
A
----------
L
F
A
L
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I
A
D
E
F
F
H
-----
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A
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A
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E
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G
E
V
N
A
---
T
P
R
T
A
V
------
E
V
R
V
S
A
A
L
A
H
-----
G
D
A
-----------------------
Y
V
R
E
L
R
----
P
G
----------------
T
V
A
R
R
L
R
T
D
Q
G
V
L
A
L
L
-------
D
P
GA
Q
A
V
H
V
A
A
----
A
A
D
L
D
H
T
Q
V
DA
T
G
V
W
E
A
V
Q
A
SAS
P
L
Q
V
V
E
A
L
V
T
A
GFT
R
R
H
C
D
L
L
E
R
A
V
L
D
R
APRLT
D
A
Q
R
A
V
G
C
T
A
V
V
G
G
V
V
H
R
L
LDDYGPG
L
D
Y
V
R
A
Y
T
D
V
A
D
T
LEPLYGDVTAALGLPEK
G
V
E
H
V
V
R
H
C
MAPRPPT
E
H
V
G
A
A
R
A
A
L
L
R
E
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A
A
A
E
R
R
A
GLAHS
A
A
R
E
A
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N
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W
L
A
F
R
A
Q
S
R
WGL
11
Fugue
48.97
18%
-12
* C5 *
-
5FIM
-
YGAU_ECOLI
A:
[1-157]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
G
L
F
N
F
V
K
--
D
A
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E
K
L
W
D
A
V
T
G
-----
Q
-----------------------------------------
H
D
K
D
D
Q
A
K
--------
K
V
Q
E
H
L
N
K
T
G
I
P
-----------
D
A
D
K
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--
N
----------
I
Q
----------
I
A
D
G
K
A
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T
G
D
G
-----
L
S
-------
Q
E
A
K
E
K
I
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A
V
G
N
I
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-----------
I
A
S
V
------
D
D
Q
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P
A
-----
T
A
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F
Y
T
---
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K
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G
D
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--------
L
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----
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G
-------------------
N
A
N
L
Y
N
K
I
F
E
A
---------
N
K
--
P
M
L
K
S
------
P
D
K
I
Y
P
G
Q
V
--
L
R
I
P
EELEHHHHHH-----------------------------------------------------------------------------------------------------------------------------------------------------
13
Fugue
44.67
13%
8
- C4 -
-
4TQ0
-
ATG5_HUMAN
A:
[4-273]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------D
K
D
V
L
R
D
V
W
F
G
R
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F
T
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A
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Y
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L
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-----
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I
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F
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A
--
I
----------
E
A
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H
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K
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A
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-----
K
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V
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N
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M
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K
K
D
H
K
Q
L
W
M
G
L
Q
N
D
R
F
D
Q
F
W
---
A
I
N
R
K
L
------
M
E
Y
P
A
E
E
N
G
F
-----
R
Y
I
P
F
R
I
---
Y
Q
T
T
-
T
E
R
P
F
I
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K
L
F
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A
A
D
G
Q
L
H
T
L
G
----------------
D
L
L
K
E
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C
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A
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M
I
HGIEPM
L
E
--
T
P
L
Q
W
L
S
----
E
H
L
S
Y
P
D
N
F
--
L
H
I
S
I
I
P
Q
P----------------------------------------------------------------------------------------------------------------------------------------------------------
6
HHSearch
40.21
25%
-201
- C4 -
-
1LUJ
-
CNBP1_HUMAN
B:
[16-35]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
I
Q
Q
K
V
R
V
L
L
M
----
L
R
--------
K
M
--
G
----------
S
N
----------
L
T
A
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
8
HHSearch
38.90
29%
-201
- C4 -
-
1M1E
-
CNBP1_HUMAN
B:
[16-41]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
I
Q
Q
K
V
R
V
L
L
M
----
L
R
--------
K
M
--
G
----------
S
N
----------
L
T
A
S
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
17
Fugue
38.49
18%
-158
* C4 *
-
1Q90
1
PETL_CHLRE
L:
[1-32]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
L
T
I
T
S
Y
V
--------
G
L
L
I
G
A
L
V
F
T
L
G
----
I
Y
L
G
L
L
K
V
V
K
L
I
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
1
HHSearch
32.10
32%
-272
- C1 -
-
3OC8
-
A:
[20-38]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
L
K
P
G
G
A
----
M
I
A
V
L
E
Y
D
V
N
E
L
--
S
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
4
HHSearch
31.81
33%
-
- C4 -
-
1T08
-
CNBP1_HUMAN
B:
[9-20]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
I
Q
Q
K
V
R
V
L
L
M
----
L
R
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
19
Fugue
31.39
14%
-3
- C3 -
-
1BI1
-
?
?:
[148-225]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
P
----------
G
T
----------
R
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A
A
T
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M
P
R
K
-----
V
R
I
V
Q
-
I
N
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F
Q
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Q
F
T
Q
L
L
D
A
D
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---
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---
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-----
D
R
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L
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H
N
G
-----
K
D
V
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L
L
D
---
D
L
A
H
-
T
--------
I
R
I
E
E
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
15
Fugue
30.75
25%
-213
- C4 -
-
4H13
1
PETL_MASLA
E:
[1-32]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
I
L
G
A
V
F
Y
I
V
F
I
A
L
F
F
G
I
A
V
---
G
I
I
F
A
I
------
K
S
I
K
L
I
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
9
HHSearch
30.49
16%
25
- C4 -
-
2ODM
-
Y995_STAAW
B:
[40-81]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
L
Y
E
E
V
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F
G
L
Q
K
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D
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D
R
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D
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K
Q
I
M
L
R
L
E
K
E
L
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
14
Fugue
28.99
25%
-244
- C4 -
-
2E74
1
PETL_MASLA
E:
[1-32]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
I
L
G
A
V
F
Y
I
V
F
I
A
L
F
F
G
I
A
V
---
G
I
I
F
A
I
------
K
S
I
K
L
I
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
10
HHSearch
28.46
16%
27
- C4 -
-
2ODM
-
Y995_STAAW
A:
[40-81]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
L
Y
E
E
V
L
D
T
Q
M
F
G
L
Q
K
E
V
D
F
A
V
K
L
G
L
V
D
R
E
D
G
K
Q
I
M
L
R
L
E
K
E
L
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
7
HHSearch
20.61
21%
73
- C4 -
-
2JCD
2
?
A:
[130-163]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
D
D
P
L
I
R
K
S
--
V
----------
Q
Q
----------
A
I
V
D
E
S
F
H
T
Y
M
H
-----
M
L
A
I
D
R
T
R
E
L
R
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
5
HHSearch
16.83
22%
167
- C4 -
-
3CHH
1
?
B:
[122-161]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
D
P
L
I
R
K
S
--
V
----------
Q
Q
----------
A
I
V
D
E
S
F
H
T
Y
M
H
-----
M
L
A
I
D
R
T
R
E
L
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
18
Fugue
3.90
22%
0
- C- -
-
1JB0
-
PSAM_THEEB
M:
[1-31]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
A
L
T
D
---------------
T
Q
V
Y
V
A
L
V
I
--------
A
L
L
P
A
V
L
A
F
R
L
S
----
T
E
L
Y
K
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------