@TOME V2.3
(Mar 2018)
Ref.
-
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Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
Show Ligands of Templates
Complexes Affinity Score
Main Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Complexes Tab
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : Q3Y2L4: (2018-01-31 )
MEKELSTLDQYLIDPDWGKPKIEETSGRKIRRNLLTNEELAWDQDDLGNHVTIWDHVYLIHLSKHSNKPEYIYVIEDGLIDALEEYDRDNLIDISYYGPGKKYIAEMEAEFDE
Atome Classification :
(20 SA)
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------.........10---.....-------------...--.------20...-------.....30...--..---------------...------40.-----.......50.....---------...60---.-..-----.---....----70----....---.----...---80........90.....-...---.100--------.....-....110.---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
(Atome)
(Ident)
(Tito)
(Num)
(QMean)
(Ligand)
(Uniprot)
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ME
K
E
L
S
T
L
D
Q
----
Y
LIDP-------------DWG--K------PKIEE-------TS
G
R
K
I
R
R
N
L--LT---------------NEE------LAW-----
D
Q
D
DLG
N
H
V
T
I
W
D
H
---------
V
Y
L
I
H
---L-SK-----H---SNKP----
E
Y
----
I
Y
V
I---E----D
G
L
---
I
D
A
L
E
EYDRD
N
-
L
I
D
I
S
-
Y
YG---
P
G
----------
K
K
Y
I
A
-
E
M
E
AEFDE---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
26
Fugue
54.16
17%
27
- C7 -
-
5LDD
-
?
A:
[10-164]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ERELDNIPDTLP
D
D
E
R
L
A
L
W
K
G
K
L
K
H
----
Y
L
I
L
S
-------------
S
A
G
--
K
------
P
I
W
S
R
HGDLSLV
N
S
T
M
G
V
V
Q
T
I
--
I
S
---------------
F
Y
E
G
A
RNPL
L
G
F
-----
T
A
G
K
V
R
F
V
I
L
I
K
G
P
---------
L
Y
F
V
A
---
I
-
S
R
L----
R
---
E
S
D
A
----
Q
L
----
R
A
Q
L
---
E
----
A
L
Y
---
M
Q
I
L
S
T
L
T
L
P
I
-
L
T
N
I
F
-
A
H
R
---
P
S
TDLRGPLQGT
E
S
L
L
A
-
S
L
A
D
S
F
T
K
G
S-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
27
Fugue
51.73
17%
-58
- C9 -
-
4CU5
-
?
A:
[186-270]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
Y
K
H
T
I
V
Y
D
G
-----------------------------------
E
V
D
K
-------
I
S
A
T
V
V
G
W
G
Y
--
N
D
---------------
G
K
I
------
L
I
C
-----
D
I
K
D
--------------------
Y
V
------------------
P
G
Q
T
----
Q
N
----
L
Y
V
V
---
G
----
G
G
A
---
C
E
K
I
S
S
I
T
K
E
K
-
F
I
M
I
K
---
G
---
N
D
----------
R
F
D
T
L
-
Y
K
A
L
D
F
I
N
R--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
19
Fugue
50.68
22%
66
- C4 -
-
3ZC4
-
CSA5A_SULSO
A:
[8-164]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------P
V
A
E
T
I
S
K
R
F
W
T
L
I
K
M
L
R
F
Y
V
V
L
R
-------------
R
F
G
YI
D
------
P
L
I
Y
S
-------
I
D
P
K
Q
I
K
D
V
L
S
E
A
L
---------------
R
E
F
------
V
S
Y
-----
T
S
S
S
S
S
R
S
I
V
I
Y
D
D
PK
N
P
V
T
A
Q
A
P
C
L
V
V
---
A
-
K
R
-----
D
EIP
Q
N
F
P
----
S
I
YRYT
I
Y
K
I
---
D
----
K
S
S
E
Y
C
I
S
P
L
V
V
N
D
K
-----
Y
A
T
-
L
I
T
---
P
N
----------
E
S
V
I
K
-
E
F
F
D
K
L
D
S
NI
Q
Y
A
R
V
L
A
S
L
A
V
GGE-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
20
Fugue
50.23
17%
37
- C5 -
-
4UN1
1
?
B:
[21-179]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
S
H
Q
F
S
P
E
E
Q
----
A
V
L
R
I
V
Q
A
NLPDSLT
P
Y
A
D
L
A
--
E
Q
A
GMT
E
A
Q
V
L
E
-------
L
L
G
R
L
K
A
S
G
A
--
I
R
RF
G
A
S
I
K
H
QKTGW
T
H
N
A
M
------
V
A
W
K
V
T
PD
Q
V
D
D
C
G
R
K
A
A
E
H
S
H
---------
I
S
H
V
Y
---
Y
-
R
P
-----
S
---
S
A
P
D
WPYE
M
Y
----
T
M
I
H
G
R
S
E
----
A
E
C
---
L
G
V
V
E
D
V
K
R
T
T
-
S
L
K
E
H
-
A
I
L
---
R
S
----------
L
K
E
L
K
-
K
T
S
M
T
Y
F
T
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
5
PsiBlast_PDB
49.46
33%
-133
- C- -
-
2FHP
-
?
A:
[114-152]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
F
D
L
----
V
L
L
D
P
-------------
P
Y
A
--
K
------
Q
E
I
V
S
-------
Q
L
E
K
M
L
E
R
Q
L
--
L
T
---------------
N
E
A
------
V
I
V
-----
C
E
T
D
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
18
Fugue
48.41
23%
42
- C3 -
-
3QS7
1
FLT3_HUMAN
E:
[56-411]
---------------------------A
A
V
E
V
D
V
S
A
S
I
T
L
Q
V
L
V
DAPGN
I
S
C
L
W
V
F
KH
S
S
L
N
C
Q
P
H
FG
V
V
S
M
V
I
L
KMTETQA
G
E
Y
L
L
F
I
Q
ST
N
Y
T
I
L
F
T
V
S
I
RT
L
R
R
P
Y
F
R
K
M
E
N
Q
D
ALVCI
S
E
S
V
P
E
P
IVE
W
V
L
C
V
V
K
K
EEKVLHELFGTDIRC
C
A
R
N
E
L
G
R
E
CT
R
L
F
T
I
D
L
N
Q
T
P
QTTLPQLFL
K
V
G
E
P
L
WI
R
C
K
A
V
H
V
N
H
G
F
GLT
W
E
L
E
N
K
A
L
E
--------
E
G
-------------
N
Y
F
--
E
------
M
S
T
Y
S
-------
T
N
R
T
M
I
R
I
L
F
--
A
F
---------------
V
S
S
------
V
A
-------
R
N
D
T
G
-----------------
Y
Y
T
C
S
---
S
-
S
K
-----
H
---
P
S
Q
S
----
A
L
----
V
T
I
V
---
E
----
K
G
F
---
I
N
A
T
E
D
Y
E
I
D
Q
-
Y
E
E
F
C
-
F
S
V
---
R
F
----------
K
A
Y
P
Q
I
R
C
T
W
T
F
S
R
K
S
F
P
C
E
QK
G
L
D
N
G
YSISKFCN
H
K
H
Q
P
G
E
YIFHAE
N
D
D
A
Q
F
T
K
M
FT
L
N
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
1
PsiBlast_PDB
48.30
30%
-101
- C8 -
-
3AF5
-
?
A:
[202-252]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
R
S
A
L
--
L
V
---------------
Q
T
D
------
E
S
F
-----
V
L
V
D
F
G
V
N
V
A
M
L
N
D
---------
P
Y
--
K
---
A
-
F
P
-----
H
---
F
D
A
P
----
E
F
----
Q
Y
V
L
---
R
----
E
G
L
---
L
D
A
I
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2
PsiBlast_PDB
47.11
30%
-100
- C8 -
-
3AF6
-
?
A:
[202-252]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
R
S
A
L
--
L
V
---------------
Q
T
D
------
E
S
F
-----
V
L
V
D
F
G
V
N
V
A
M
L
N
D
---------
P
Y
--
K
---
A
-
F
P
-----
H
---
F
D
A
P
----
E
F
----
Q
Y
V
L
---
R
----
E
G
L
---
L
D
A
I
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
25
Fugue
45.93
18%
39
* C9 *
-
1U9T
-
?
A:
[1-337]
MN
H
Y
T
R
W
L
E
L
KEQA
R
D
I
A
G
L
M
NIR
E
A
E
L
A
F
A
R
V
THD
A
W
R
M
H
G
D
I
R
D
I
L
A
A
LESV
G
E
T
K
C
I
C
R
N
EY
A
V
H
E
Q
V
G
T
FTNQHLNGHAGLILNPR
A
L
D
L
R
L
FLNQW
A
S
V
F
H
I
KENTAR
G
E
R
Q
S
I
Q
F
F
D
HQGDAL
L
K
V
Y
A
T
DNTD
M
A
A
W
S
E
L
L
A
R
F
ITDENTPLELKV
V
Q
T
R
A
D
A
T
V
V
E
Q
E
W
R
A
MTDVHQ
F
F
T
L
L
K
R
H
NLT
R
Q
Q
A
F
N
L
VADDL
A
C
K
V
S
N
S
A
L
A
Q
----
I
L
E
S
A
-------------
Q
Q
D
--
G
------
N
E
I
M
V
-------
F
V
G
N
R
G
C
V
Q
I
--
F
T
---------------
G
V
V
------
E
-------
K
V
V
P
M
K
G
W
L
N
I
F
N
P
---------
T
F
T
L
H
---
L
-
L
E
----------
E
S
I
----
A
E
----
A
W
V
T
---
R
K
P
T
S
D
G
Y
---
V
T
S
L
E
L
F
A
H
D
G
-
T
Q
I
A
Q
-
L
Y
G
QRT
E
G
----------
D
Q
E
Q
A
-
Q
W
R
K
Q
I
A
S
L
I
P------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
4
PsiBlast_PDB
39.65
35%
-49
- C2 -
-
3OF1
1
A:
[43-77]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
K
-----
Q
---
G
D
Q
G
----
D
Y
----
F
Y
V
V
---
E
----
K
G
T
---
V
D
F
---
Y
V
N
D
N
-
K
V
N
S
S
---
G
---
P
G
----------
S
S
F
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
14
HHSearch
38.50
32%
7
- C8 -
-
2NOG
-
?
B:
[100-124]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Q
F
---
I
K
A
N
E
K
W
G
R
D
D
-
I
E
N
I
A
-
R
E
V
---
E
G
----------
K
T
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
15
HHSearch
35.87
32%
26
* C8 *
-
2NOG
-
?
A:
[100-124]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Q
F
---
I
K
A
N
E
K
W
G
R
D
D
-
I
E
N
I
A
-
R
E
V
---
E
G
----------
K
T
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
22
Fugue
34.66
18%
19
- C6 -
-
2O1S
1
DXS_ECOLI
A:
[3-620]
--------------------------------FDIAKY
P
T
L
A
L
VDS
T
Q
E
L
R
L
LPKES
L
P
K
L
C
D
E
L
R
R
Y
L
L
D
SVSRSSGH
F
A
S
G
L
G
T
V
E
L
T
V
A
L
H
Y
V
YNTPF
D
Q
L
I
W
D
VGHQA
Y
P
H
K
I
L
T
GRRDKIGTIRQKGGLHPFPWRGESEYDVLSVGHSST
S
I
S
A
G
I
G
I
A
V
A
A
E
K
E
GKN
R
R
T
V
C
V
I
G
DGAITA
G
M
A
F
E
A
M
N
H
A
G
D
IRPD
M
L
V
I
L
N
D
N
E
P
G
T
L
F
E
----
E
L
------------------
G
--
F
------
N
Y
I
G
P
-------
V
D
G
H
D
V
L
G
L
I
--
T
T
---------------
L
K
N
M
-----
R
D
L
-----
K
------------
G
---------
P
Q
F
L
H
---
I
M
T
K
KGR
G
Y
E
---
P
A
L
P
----
S
Y
----
S
K
I
F
---
G
----
D
W
L
---
C
E
T
A
A
K
-
D
N
K
L
M
A
I
T
P
A
M
R
E
G
---
S
G
M---------
V
E
F
S
R
-
K
F
P
D
R
Y
F
D
VAIA
E
Q
H
A
V
T
F
A
A
G
L
A
I
G
G
Y
K
P
I
V
A
I
Y
STFLQRA
Y
D
Q
V
L
HDVAIQKLPVLFAIDRAGIVGADGQTHQGAFDLSYLRCIPE
M
V
I
M
T
P
SD
E
N
E
C
R
Q
M
L
Y
T
G
Y
H
YND
G
P
S
A
V
R
Y
P
RGNAVGVELTP
L
E
K
L
PIG
K
G
I
V
K
R
R
G
E
K
L
A
I
L
N
F
G
TL
M
P
E
A
A
K
V
A
E
S
L
N
A
T
L
V
DMRFVKPLD
E
A
L
I
L
E
M
A
A
S
H
E
A
L
V
T
V
E
ENAIMGG
A
G
S
G
V
N
E
V
L
M
A
H
RKP
V
P
V
L
N
I
G
L
PDFF
I
P
Q
G
T
Q
E
E
M
R
A
E
L
GLD
A
A
G
M
E
A
K
I
K
A
W
L
A
12
HHSearch
32.61
12%
-143
- C8 -
-
1UW4
-
C:
[13-37]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
L
T
---
K
----
E
Q
L
---
Q
E
H
L
Q
P
M
P
E
----
H
D
Y
F
-
E
F
F
---
S
N
----------
D
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
11
HHSearch
31.76
8%
-30
- C8 -
-
2OFI
3
?
A:
[14-68]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
I
A
Y
-----
H
D
N
E
W
G
V
P
E
T
D
S
R
K
---------
L
F
E
M
I
C
L
E
G
-
Q
Q
-----
A
---
G
L
S
W
----
I
T
----
V
L
K
K
---
R
----
E
N
Y
---
R
A
C
F
H
Q
F
D
P
I
R
-
I
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
16
HHSearch
30.50
8%
-30
- C8 -
-
2JG6
-
?
A:
[14-68]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
L
N
Y
-----
H
D
H
V
W
G
Q
P
L
Y
D
S
K
A
---------
L
F
K
L
L
A
L
E
S
-
Q
H
-----
A
---
G
L
S
W
----
L
T
----
I
L
K
K
---
K
----
E
A
Y
---
E
E
A
F
Y
D
F
E
P
E
K
-
V
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
6
PsiBlast_PDB
30.41
48%
-74
- C8 -
-
1WB8
1
SODF_SULSO
A:
[18-42]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
I
D
A
L
E
P
Y
I
S
K
D
-
I
I
D
V
H
-
Y
N
G
---
H
H
----------
K
G
Y
V
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
10
HHSearch
29.91
8%
-28
- C8 -
-
2OFK
3
?
B:
[14-68]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
I
A
Y
-----
H
D
N
E
W
G
V
P
E
T
D
S
R
K
---------
L
F
E
M
I
C
L
E
G
-
Q
Q
-----
A
---
G
L
S
W
----
I
T
----
V
L
K
K
---
R
----
E
N
Y
---
R
A
C
F
H
Q
F
D
P
I
R
-
I
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
9
HHSearch
29.84
21%
-90
- C8 -
-
3FXD
-
?
C:
[14-41]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
L
K
A
L
N
D
----
A
I
E
K
G
-------------
P
W
D
--
K
------
S
N
F
L
R
-------
V
I
G
K
K
L
I
A
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
8
PsiBlast_PDB
27.89
44%
-63
- C8 -
-
1B06
-
SODF_SULAC
A:
[18-42]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
V
D
A
L
E
P
Y
I
S
K
D
-
I
I
D
V
H
-
Y
N
G
---
H
H
----------
K
G
Y
V
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------