@TOME V2.3
(Mar 2018)

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Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : LinJ_12_0016: (2018-03-08 )
MGDHLGSRFTVIEQIGSGNYGSLYRVIDGEAATLADRIIATKKLQDTINHPHVLREVSVQRHAQKCSPHIVKLLHVVPRDRVRAALVLEYVPLDLRTFLNAFYCDQAKSSAPTWCATAGAGEVKSAAPPPCHIPLIYVRRMLRGLIEALHCLHARGIVHRDVKPENILVEPLGLGHPLRCVCPPMGSFGPTGEAAGCWVHAPQCSDPRQEKDATQPMQPRGTLEPCQFFCRNSVALHHELTGDELASAIHRLHCETCRPCPRARAGVGKHPLQQHRDRSDMKTSNSCSQERQADAVDGEGPASVDDDEENKFTAPTPPPLMPDVKLCDFGSARHIGTLRLRSAEEQREELTPGPTTPVYCAPEMMLLQRYGTSVDMWAVGAILFEMLTGEFFLGVGTLRSFSGDVVVQDDYCVMHRLNRMFRHLGTPSVEEWRCIAHPHYYPDEMLAHLPQVRDAALFRCLAQPIATDVSLLPESGDIKPNGDAKTADEQTELSVRPSAETCSFAQAPVNGTTDSHAARASVPPRDMASARHPLNVSDFLYQHIGKSGVDFLRSLLRYDPAKRMTSAEALRHPFLSPEVANM

Atome Classification :

(20 SA) ----------------------.........10........20.......---.-30.........40....---...----.50..-......60......-..70........-----80----.----........90..-......100.......110.......120.......130.......140.......150.......160.......170-------........180.......190.......200.......210.......220.......230...-------....240.......250..-------.....260---.........270.....-..280......--.-290.......300.--......310...---....320.......330...-....340.......350.......360......-.370.......380.......-------------390.......400.......410.......420.......430.......440........450.......460.......470.......480.......490.......500.......510.......520.......530.......540.......550.......560.......570.......580
(Atome) (Ident) (Tito) (Num) (QMean) (Ligand) (Uniprot) ----------------------MGDHLGSRFTVIEQIGSGNYGSLYRVID---G-E-AATLADRIIATKKLQ---DTI----NHPHV-LREVSVQRHAQKCS-PHIVKLLHVVPR-----D-----R----VRAALVLEYVPL-DLRTFLNAFYCDQAKSSAPTWCATAGAGEVKSAAPPPCHIPLIYVRRMLRGLIEALHCLHARGIVHRDVKPENILVEP--------LGLGHPLRCVCPPMGSFGPTGEAAGCWVHAPQCSDPRQEKDATQPMQPRGTLEPCQFFCRNSVA-------LHHELTGDELASAIHRLHC-------ETCRPC-----PRARAGVGKHPLQQHRD-RSDMKTSNSCS--Q-ERQADAVDGEGPAS--VDDDEENKFTAP---TPPPLMPDVKLCDFGSARHI-GTLRLRSAEEQREELTPGPTTPVYCAPEMMLLQ-RYGTSVDMWAVGAILFEMLTG-------------EFFLGVGTLRSFSGDVVVQDDYCVMHRLNRMFRHLGTPSVEEWRCIAHPHYY-PDEMLAHLPQVRDAALFRCLAQPIATDVSLLPESGDIKPNGDAKTADEQTELSVRPSAETCSFAQAPVNGTTDSHAARASVPPRDMASARHPLNVSDFLYQHIGKSGVDFLRSLLRYDPAKRMTSAEALRHPFLSPEVANM
25 HHSearch 80.7031%-108 - C1 - - 1UA2 CDK7_HUMAN D:[13-240] -------------------------------EKLDFLGEGQFATVYKARD---K-N-T----NQIVAIKKI------------NRTA-LREIKLLQELS--H-PNIIGLLDAFGH-----------K----SNISLVFDFMET-DLEVIIKDNS---------------------------LVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDE-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NGVLKLADFGLAKSF-GSPN--------RAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLR-------------VPF--------LPGDSD-------LDQLTRIFETLGTPTEEQWPDM----------------------------------------------------------------------------------------------------------------------------------------------------
44 HHSearch 80.2531% -69 - C1 - - 4NM5 GSK3B_HUMAN A:[39-270] -------------------------PQEVSYTDTKVIGNGSFGVVYQAKL---C-D-S----GELVAIKKVL---QDK------RFK-NRELQIMRKLD--H-CNIVRLRYFFYS-----SGEKKDE----VYLNLVLDYVPE-TVYRVARHYSR------------------------AKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP--------D--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAVLKLCDFGSAKQL-VRG---------EPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG-------------QPI--------FPGDSG-------VDQLVEIIKVLGTPTREQIR------------------------------------------------------------------------------------------------------------------------------------------------------
21 HHSearch 80.1532% -67 * C1 * - 1J1B GSK3B_HUMAN B:[53-282] ---------------------------EVSYTDTKVIGNGSFGVVYQAKL---C-D-S----GELVAIKKVL---QDK------RFK-NRELQIMRKLD--H-CNIVRLRYFFYS-----SGEKKDE----VYLNLVLDYVPE-TVYRVARHYSRA------------------------KQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP--------D--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAVLKLCDFGSAKQL-VRG---------EPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG-------------QPI--------FPGDSG-------VDQLVEIIKVLGTPTREQIR------------------------------------------------------------------------------------------------------------------------------------------------------
53 Fugue 67.9916% -15 - C1 - - 2RIO IRE1_YEAST A:[8-434] ---------------------NFEQSLKNLVVSEKILGYGSSGTVVFQGS---F-Q-GRPVAVKRMLIDFCD---IAL----MEIKL-LTESDDH--------PNVIR-YYCSET-----T-----D----RFLYIALELCNL-NLQDLVESKY---------------------------------NPISLLRQIASGVAHLHSLKIIHRDLKPQNILVST-------------------------------------------------------------------------------------------------------------------------------------------------------------------------SSRFTADQ---QTGAENLRILISDFGLCKKLDSTSGWRAPELLEESNNLQTK------------R-RLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLFWPKSKKLEFLLKVSDRLEIENRDPPSALLMKFDAGSDFVIPSGDWTVKFDKTFMDRKYHSSK--LMDLLRALRNKYHHFMDLPEDIAELMGPVPDGFYDYFTKRFPNLLIGVYMIVKEN-----LSDDQILREFLYS------
35 HHSearch 56.4827%-122 - C1 - - 4AU8 CDK5_HUMAN A:[4-141] --------------------------GSQKYEKLEKIGEGTYGTVFKAKN---R-E-T----HEIVALKRV------------PSSA-LREICLLKELK--H-KNIVRLHDVLH------------------KLTLVFEFCDQ-DLKKYFDSCN---------------------------GDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLIN--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
9 PsiBlast_PDB 55.6227% -79 - C1 - - 2DS1 - CDK2_HUMAN A:[4-173] ------------------------------FQKVEKIGEGTYGVVYKARN---------KLTGEVVALKKI------------VPSTAIREISLLKELN--H-PNIVKLLDVIHT-----E-----N-----KLYLVFEHVHQ-DLKTFMDA-------------SALTG-------------IPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA---RAFGVPVRTY--THEVVTLWYRAPEI--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
29 HHSearch 54.3227%-148 - C1 - - 3EB0 ? A:[6-195] ---------------------------SKKYSLGKTLGTG-FGIVCEVFD---I-E-S----GKRFALKKVL---QDP------RYK-NRELDIMKVLD--H-VNIIKLVDYFYT-----T-----N----KYLNVIMEYVPD-TLHKVLKSFIRS------------------------GRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVN--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
48 Fugue 53.0016% - - C1 - - 3H4J - SNF1_SCHPO B:[27-356] ----------------------SKRHIGP-YIIRETLGEGSFGKVKLATH---YKT-QQKVALKFISRQLLK---KSD----MHMRV-EREISYLKLLRH---PHIIKLYDVITT-----P-----T-----DIVMVIEYAG-----------------------------GELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDD-----------NLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKLYA-GPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVYVMPD-------FLSPGA-----QSLIRRMIVADPMQRIT-IQEIRRDPWFN--V-NLPDYLRPMEEVQGSYADSRIVSKLGEAMGFSEDYIVEALRSDENNEVKEA-YNLLHENQVIQEKLEHHH----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
18 PsiBlast_PDB 49.9226% -44 - C1 - - 5UQ1 - CDK2_HUMAN A:[7-176] ------------------------------FQKVEKIGEGTYGVVYKA---------------EVVALKKIRLDTETE----GVPSTAIREISLLKELN--H-PNIVKLLDVIHT-----E-----N-----KLYLVFEFLHQ-DLKKFMDA-------------SALTG-------------IPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA---RAFGVPVRTY--THEVVTLWYRAPEI--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
41 HHSearch 49.5826% -57 - C1 - - 5G6V B:[2-146] ----------------------------ETYIKLDKLGEGTYATVYKGKS---K-L-T----DNLVALKEIR---LEHEEG-APCTA-IREVSLLKDLK--H-ANIVTLHDIIHT-----------E----KSLTLVFEYLDK-DLKQYLDDCG---------------------------NIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLIN--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
19 PsiBlast_PDB 48.6626% -43 - C1 - - 5UQ2 - CDK2_HUMAN A:[7-176] ------------------------------FQKVEKIGEGTYGVVYKARN---------KLTGEVVALKKIRLDTETE----GVPSTAIREISLLKELN--H-PNIVKLLDVIHT-----E-----N-----KLYLVFEFLHQ-DLKKFMDA-------------SALTG-------------IPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA---RAFGVPVRTY--THEVVTLWYRAPEI--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
33 HHSearch 48.6125% -66 - C1 - - 1KOB - ? A:[50-183] ---------------------------YDYYDILEELGSGAFGVVHRCVE---K-A-T----GRVFVAKFIN---TPYPL--DKYTV-KNEISIMNQLH--H-PKLINLHDAFED-----------K----YEMVLILEFLSGGELFDRIAAED---------------------------YKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCE--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
42 HHSearch 48.3326% -52 - C1 - - 5G6V CDK16_HUMAN A:[2-139] ----------------------------ETYIKLDKLGEGTYATVYKGKS---K-L-T----DNLVALKEIR---LEHEEG-APCTA-IREVSLLKDLK--H-ANIVTLHDIIHT-----------E----KSLTLVFEYLDK-DLKQYLDDCG---------------------------NIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLIN--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
46 Fugue 48.2314% 26 - C1 - - 1KOB ? A:[23-374] INDYDKFYEDIWKKYVPQPVEVKQGSVYDYYDILEELGSGAFGVVHRCVE---K-ATGRVFVAKFINTPYPL---DKY----TVKNE-ISIMNQLHH------PKLINLHDAFE------D-----K----YEMVLILEFL---------------------------SGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCET--------KK-ASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDR--EPVGFYTDMWAIGVLGYVLLSGLS----PFAGEDDLETLQNVKRCDW-------EFDEDAFSSVSPEAKDFIKNLLQKEPRK-RLTVHDALEHP--WLKGDHSNLTSRIPSS--RYNKIRQKIKEK---YADWPAPQPAIGRIANFSSL-RKHRPQEYQIYDSYFDRKEA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
45 Fugue 47.6212% -8 - C1 - - 1TKI - TITIN_HUMAN A:[18-338] ------------------------KELYEKYMIAEDLGRGEFGIVHRCVE---T-S-S----KKTYMAKFVKV--KGT----DQVLV-KKEISILNIARH---RNILH-LHESFE-----S-----M----EELVMIFEFIS---------------------------GLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQT--------RR-SSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQH--DVVSTATDMWSLGTLVYVLLS-------GINPFLAETNQQIIENIMNAEYTFDEEAFKEI-----SIEAMDFVDRLLVKERKSRMTASEALQHPWLK-QKIERVSTKVIRTL--KHRRYYHTLIKK---DLNMVVSAARISCGGAIRSQ-KGVSVAKVKVASI---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
1 PsiBlast_PDB 46.0729% -35 - C1 - - 3G33 - CDK4_HUMAN A:[10-153] -----------------------------RYEPVAEIGVGAYGTVYKARDPHSG-H-FVALKSVRVPNGGGG---GGG----LPIST-VREVALLRRLEAFEHPNVVRLMDVCAT-----S-----RTDREIKVTLVFEHVDQ-DLRTYLDK-------------------------APPPG-LPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILV---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
14 PsiBlast_PDB 45.9726% -33 - C1 - - 4ERW CDK2_HUMAN A:[12-180] ------------------------------FQKVEKIGEGTYGVVYKARN---------KLTGEVVALKKIRL---------GVPSTAIREISLLKELN--H-PNIVKLLDVIHT-----E-----N-----KLYLVFEFLHQ-DLKKFMDA-------------SALTG-------------IPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA---RAFGVPVRTY--THEVVTLWYRAPEI--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
43 HHSearch 45.2524% -67 - C1 - - 2WEL KCC2D_HUMAN A:[2-141] --------------------------MTDEYQLFEELGKGAFSVVRRCMK---I-P-T----GQEYAAKIIN---TKKLSARDHQKL-EREARICRLLK--H-PNIVRLHDSISE-----------E----GFHYLVFDLVTGGELFEDIVAR----------------------------EYYSEADASHCIQQILESVNHCHLNGIVHRDLKPENLLLA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
22 HHSearch 45.0827% -46 - C1 - - 5BYZ MK07_HUMAN A:[4-144] --------------------------VGDEYEIIETIGNGAYGVVSSARR---R-L-T----GQQVAIKKIP---NAFDVVTNAKRT-LRELKILKHFK--H-DNIIAIKDILRPTVPYGE-----F----KSVYVVLDLMES-DLHQIIHSS----------------------------QPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVN--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
10 PsiBlast_PDB 44.9828% -30 - C1 - - 4EON CDK2_HUMAN A:[6-141] ------------------------------FQKVEKIGEGTYGVVYKARN---------KLTGEVVALKKIRLDTETE----GVPSTAIREISLLKELN--H-PNIVKLLDVIHT-----E-----N-----KLYLVFEFLSM-DLKKFMDA-------------SALTG-------------IPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINT--------EG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------