@TOME V2.3
(Mar 2018)

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Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : LinJ_31_3300: (2018-03-12 )
MSAFSSVLGAPGATGDVKYVKKKLIGTGSYGEAWLVERASDKAIFVAKTMDLGKMSSRDRTYAYSEIKCLASCHHPNIIKYIEDKEDNEHLLIVMEFADSGDLDRQIKARATDFKHFQEHEALFLFLQLCLALDHIHGHKMLHRDIKGANVLLTSTGLIKIGDFGFSHQYDDTVSGVVANTFCGTPYYLAPELWNNQRYSKKADVWSLGVLLYEIMALKRPFTSTNMKGLMAKVLSGDYEPLPEVYSADFRDVVRKILVCDAAQRPSVRDIFRFPYVREGLKVFMHTMKKNSRIDNEVKDALMEHVTEILSSESVEVPKSTPVGQINKDVFFSGYLNKLKGGDNHSWKRRYLQVQKGHFIMSDKESDTEGKALSLEHIQSVCPVPVSTAKREHVFALHTTSGKSMWFEAASLENMEEWIHAIQCGLGVA

Atome Classification :

(20 SA) .........10........20........30........40........50.....---...60........70........80......--..90........100.......110.......120.......130.....-----..140.......150...--.---...160.......170.......180.......190......----.-200.......210.......220.......230.......240-.---.....---...250.......260..--.....270.......280.......290.......300.......310.......320.......330.......340.......350.......360.......370.......380.......390.......400.......410.......420.......
(Atome) (Ident) (Tito) (Num) (QMean) (Ligand) (Uniprot) MSAFSSVLGAPGATGDVKYVKKKLIGTGSYGEAWLVERASDKAIFVAKTMDLGKMS---SRDRTYAYSEIKCLASCHHPNIIKYIEDKED--NEHLLIVMEFADSGDLDRQIKARATDFKHFQEHEALFLFLQLCLALDHIH-----GHKMLHRDIKGANVLLTS--T---GLIKIGDFGFSHQYDDTVSGVVANTFCGTPYYLAPELWNNQR----Y-SKKADVWSLGVLLYEIMALKRPFTSTNMKGLMAKVLSGDYE---P---LPEVY---SADFRDVVRKILVCDAAQ--RPSVRDIFRFPYVREGLKVFMHTMKKNSRIDNEVKDALMEHVTEILSSESVEVPKSTPVGQINKDVFFSGYLNKLKGGDNHSWKRRYLQVQKGHFIMSDKESDTEGKALSLEHIQSVCPVPVSTAKREHVFALHTTSGKSMWFEAASLENMEEWIHAIQCGLGVA
1 PsiBlast_PDB 90.8739%-149 - C1 - - 4APC - NEK1_HUMAN A:[25-288] -----------------KYVRLQKI------KAILVKSTEDGRQYVIKEINISRMS---SKEREESRREVAVLANMKHPNIVQYRESFEE--NGSLYIVMDYCEGGDLFKRINAQKGVL--FQEDQILDWFVQICLALKHVH-----DRKILHRDIKSQNIFLTK--D---GTVQLGDFGIARVLNSTVE--LARACIGTPYYLSPEICENKP----Y-NNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFP---P---VSLHY---SYDLRSLVSQLFKRNPRD--RPSVNSILEKGFIAKRIEKFL------------------------------------------------------------------------------------------------------------------------------------------------
2 PsiBlast_PDB 90.2139%-148 - C1 - - 4B9D NEK1_HUMAN A:[25-288] -----------------KYVRLQKI------KAILVKSTEDGRQYVIKEINISRMS---SKEREESRREVAVLANMKHPNIVQYRESFEE--NGSLYIVMDYCEGGDLFKRINAQKGVL--FQEDQILDWFVQICLALKHVH-----DRKILHRDIKSQNIFLTK--D---GTVQLGDFGIARVLNSTVE--LARACIGTPYYLSPEICENKP----Y-NNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFP---P---VSLHY---SYDLRSLVSQLFKRNPRD--RPSVNSILEKGFIAKRIEKFL------------------------------------------------------------------------------------------------------------------------------------------------
3 PsiBlast_PDB 72.9638% -38 - C1 - - 2W5A NEK2_HUMAN A:[14-273] ------------------------IGTGSYGRCQKIRRKSDGKILVWKELDYGSMT---EAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRS------LHRDLKPANVFLDG--K---QNVKLGDFGLARIL---TS--FAKTFVGTPYYMSPEQMNRM-----Y-NEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFR---R---IPYRY---SDELNEIITRMLNLKDYH--RPSVEEILENPLILE------------------------------------------------------------------------------------------------------------------------------------------------------
15 PsiBlast_PDB 72.5232% -90 - C1 - - 2QNJ - MARK3_HUMAN A:[60-310] ----------------------KTIGKGNFAKVKLARHILTGREVAIKIIDKTQLN---PTSLQKLFREVRIMKILNHPNIVKLFEVIET--EKTLYLIMEYASGGEVFDYLVAHG----RMKEKEARSKFRQIVSAVQYCH-----QKRIVHRDLKAENLLLDA--D---MNIKIADFGFSNEF--T------DTFCGSPPYAAPELFQGKK----YDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYR-------IPFYM---STDCENLLKRFLVLNPIK--RGTLEQIMKDRWINAG-----------------------------------------------------------------------------------------------------------------------------------------------------
25 HHSearch 72.4229% -45 - C1 - - 4WOT ROCK2_HUMAN B:[68-338] ---------------AEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIK--RSDSAFFWEERDIMAFANSPWVVQLFYAFQD--DRYLYMVMEYMPGGDLVNLMSNY-----DVPEKWAKFYTAEVVLALDAIH-----SMGLIHRDVKPDNMLLDK--H---GHLKLADFGTCMKMDETG-MVHCDTAVGTPDYISPEVLKSQGGDGFY-GRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHKNSLCFP---EDAEI---SKHAKNLICAFLTDREVRLGRNGVEEIRQHPFFKND-----------------------------------------------------------------------------------------------------------------------------------------------------
9 PsiBlast_PDB 71.8838% -26 - C1 - - 2W5B NEK2_HUMAN A:[14-273] ------------------------IGTGSYGRCQKIRRKSDGKILVWKELDYGSMT---EAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRS------LHRDLKPANVFLDG--K---QNVKLGDFGLARILNHDTS--FAKAFVGTPYYMSPEQMNRMS----Y-NEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFR---R---IPYRY---SDELNEIITRMLNLKDYH--RPSVEEILENPLILE------------------------------------------------------------------------------------------------------------------------------------------------------
16 PsiBlast_PDB 70.9731%-109 - C1 - - 5ES1 MARK4_HUMAN A:[21-271] ----------------------RTIGKGNFAKVKLARHILTGREVAIKIIDKTQLN---PSSLQKLFREVRIMKGLNHPNIVKLFEVIET--EKTLYLVMEYASAGEVFDYLVSHG----RMKEKEARAKFRQIVSAVHYCH-----QKNIVHRDLKAENLLLDA--E---ANIKIADFGFSN----------------SPPYAAPELFQGKK----YDGPEVDIWSLGVILYTLVSGSLPFDGHNLKELRERVLRGKYR-------VPFYM---STDCESILRRFLVLNPAK--RCTLEQIMKDKWINIG-----------------------------------------------------------------------------------------------------------------------------------------------------
7 PsiBlast_PDB 70.1938% -22 - C1 - - 5M51 NEK2_HUMAN A:[14-273] ------------------------IGTGSYGRCQKIRRKSDGKILVWKELDYGSMT---EAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDG--K---QNVKLGDF------------------VGTPYYMSPEQMNRMS----Y-NEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFR---R---IPYRY---SDELNEIITRMLNLKDYH--RPSVEEILENPLILE------------------------------------------------------------------------------------------------------------------------------------------------------
11 PsiBlast_PDB 70.1638% -27 - C1 - - 5M57 NEK2_HUMAN A:[14-273] ------------------------IGTGSYGRCQKIRRKSDGKILVWKELDYGSMT---EAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDG--K---QNVKLGDF------------------VGTPYYMSPEQMNRMS----Y-NEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFR---R---IPYRY---SDELNEIITRMLNLKDYH--RPSVEEILENPLILE------------------------------------------------------------------------------------------------------------------------------------------------------
8 PsiBlast_PDB 69.2338% -76 - C1 - - 2JAV NEK2_HUMAN A:[14-273] ------------------------IGTGSYGRCQKIRRKSDGKILVWKELDYGSMT---EAEKQMLVSEVNLLRELKHPNIVRYYDRIID----TLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSD---------LKPANVFLDG--K---QNVKLGDFGLARIL-------------GTPYYMSPEQMNRMS----Y-NEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFR---R---IPYRY---SDELNEIITRMLNLKDYH--RPSVEEILENPLILE------------------------------------------------------------------------------------------------------------------------------------------------------
19 PsiBlast_PDB 68.1332% -99 - C- - - 2R0I - MARK2_RAT A:[57-300] ----------------------KTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLN---SSSLQKLFREVRIMKVLNHPNIVKLFEVIET--EKTLYLVMEYASGGEVFDYLVAHG----RMKEKEARAKFRQIVSAVQYCH-----QKFIVHRDLKAENLLLDA--D---MNIKIADF-------------------GSPPYAAPELFQGKK----YDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYR-------IPFYM---STDCENLLKKFLILNPSK--RGTLEQIMK------------------------------------------------------------------------------------------------------------------------------------------------------------
4 PsiBlast_PDB 67.7838% -26 - C1 - - 2XNM NEK2_HUMAN A:[14-273] ------------------------IGTGSYGRCQKIRRKSDGKILVWKELDYGSMT---EAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR---------RDLKPANVFLDG--K---QNVKLGDFGLARIL-----------FVGTPYYMSPEQMNR-S----Y-NEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFR---R---IPYRY---SDELNEIITRMLNLKDYH--RPSVEEILENPLILE------------------------------------------------------------------------------------------------------------------------------------------------------
36 HHSearch 66.7927% -86 - C1 - - 4XBR INKA1_HUMAN (first) A:[93-350] ---------------RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ-----QRRELLFNEVVIMRDYQHENVVEMYNSYLV--GDELWVVMEFLEGGALTDIVTHT-----RMNEEQIAAVCLAVLQALSVLH-----AQGVIHRDIKSDSILLTH--D---GRVKLSDFGFCAQVSKEV--PRRKSLVGTPYWMAPELISRLP----Y-GPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRL-K---NLHKV---SPSLKGFLDRLLVRDPAQ--RATAAELLKHPFLAKA-----------------------------------------------------------------------------------------------------------------------------------------------------
17 PsiBlast_PDB 66.7732% -93 - C1 - - 5EAK MARK2_HUMAN A:[21-264] ----------------------KTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLN---SSSLQKLFREVRIMKVLNHPNIVKLFEVIET--EKTLYLVMEYASGGEVFDYLVAHG----RMKEKEARAKFRQIVSAVQYCH-----QKFIVHRDLKAENLLLDA--D---MNIKIADFGFS--------------FCGSPPYAAPELFQGKK----YDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYR-------IPFYM---STDCENLLKKFLILNPSK--RGTLEQIMK------------------------------------------------------------------------------------------------------------------------------------------------------------
45 Fugue 66.0524% -46 - C1 - - 1TKI - TITIN_HUMAN A:[18-338] ------------KELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFV---KVK---GTDQVLVKKEISILNIARHRNILHLHESFES--MEELVMIFEFISGLDIFERINTSAFEL---NEREIVSYVHQVCEALQFLH-----SHNIGHFDIRPENIIYQTRRS---STIKIIEFGQARQLKP---GDNFRLLFTAPEYYAPEVHQHDV----V-STATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYT---F---DEEAFKEISIEAMDFVDRLLVKERKS--RMTASEALQHPWLKQKIERVSTKVIRTLKHRRYYHTLI---------------KKDLNMVVSAARISCGGAIRSQKG-------------------------------------VSVAKVKVASI----------------------------------------
28 HHSearch 64.7129% -35 - C1 - - 3C0G CSKP_HUMAN B:[22-293] --------------FEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSS--DGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH-----DNNIIHRDVKPHCVLLAS--KENSAPVKLGGFGVAIQLGES--GLVAGGRVGTPHFMAPEVVKREP----Y-GKPVDVWGCGVILFILLSGCLPFYGTKER-LFEGIIKGKYK---MNPRQWSHI---SESAKDLVRRMLMLDPAE--RITVYEALNHPWLKER-----------------------------------------------------------------------------------------------------------------------------------------------------
35 HHSearch 64.3527%-112 - C1 - - 5K00 MELK_HUMAN A:[6-265] --------------LLKYYELHETIGTG--AKVKLACHILTGEMVAIKIMDKNTL----GSDLPRIKTEIEALKNLRHQHICQLYHVLET--ANKIFMVLEYCPGGELFDYIISQD----RLSEEETRVVFRQIVSAVAYVH-----SQGYAHRDLKPENLLFDE--Y---HKLKLIDFGLCAKP--------------SLAYAAPELIQGKSY---L-GSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGKY----D---VPKWL---SPSSILLLQQMLQVDPKK--RISMKNLLNHPWIMQD-----------------------------------------------------------------------------------------------------------------------------------------------------
5 PsiBlast_PDB 64.1338% -23 - C1 - - 2XNO NEK2_HUMAN A:[14-273] ------------------------IGTGSYGRCQKIRRKSDGKILVWKELDYGSMT---EAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRS--------RDLKPANVFLDG--K---QNVKLGDF-----------------FVGTPYYMSPEQMNR--------NEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFR---R---IPYRY---SDELNEIITRMLNLKDYH--RPSVEEILENPLILE------------------------------------------------------------------------------------------------------------------------------------------------------
29 HHSearch 63.8029% -41 - C1 - - 3C0I CSKP_HUMAN A:[22-293] --------------FEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSS--DGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH-----DNNIIHRDVKPHCVLLAS--KENSAPVKLGGFGVAIQLGESG--LVAGGRVGTPHFMAPEVVKREP----Y-GKPVDVWGCGVILFILLSGCLPFYGTKER-LFEGIIKGKYK---MNPRQWSHI---SESAKDLVRRMLMLDPAE--RITVYEALNHPWLKER-----------------------------------------------------------------------------------------------------------------------------------------------------
18 PsiBlast_PDB 63.6932%-101 - C1 - - 1ZMU - MARK2_RAT A:[57-300] ----------------------KTIGKG--AKVKLARHILTGKEVAVKIIDKTQLN---SSSLQKLFREVRIMKVLNHPNIVKLFEVIET--EKTLYLVMEYASGGEVFDYLVAHG----RMKEKEARAKFRQIVSAVQYCH-----QKFIVHRDLKAENLLLDA--D---MNIKIA---------------------GSPPYAAPELFQGKK----YDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYR-------IPFYM---STDCENLLKKFLILNPSK--RGTLEQIMK------------------------------------------------------------------------------------------------------------------------------------------------------------