@TOME V2.3
(Mar 2018)
Ref.
-
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Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
Show Ligands of Templates
Complexes Affinity Score
Main Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Complexes Tab
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : MGG_02546T0: (2018-03-19 )
TPPGSPSARLAGTSNARLAGISNTNPPGGAPRPRQQCFLSADLGPDVMGQPTLLEATPFVNDMFDFHGYRCQMGKDCSHVRCRGFPAAFKMTARNYPDGKGPLGTSAGDSFVPGPVVKVYPAPR
Atome Classification :
(20 SA)
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------...---......------10...-.....20-----------.......---------.-.30-----------------..------.....--.40.----.....-----------..50-...--.--...-----.60..---.----....-------..70........80---..---.......--90...----.....100.-------.....----------..110...-.....120..----------------------------------------------------------
(Atome)
(Ident)
(Tito)
(Num)
(QMean)
(Ligand)
(Uniprot)
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TPP---GSPSAR------LAGTS-N
A
R
L
AG------------ISNTNPP---------G-GAP-----------------R
P
------
R
Q
Q
C
F
--
L
SAD----LGPDV-----------MGQP-TLL--E--ATP-----
F
V
-
N
D
---
M
----
F
DFH-------GYRCQMGKDCSHV----RC---RGF
P
A
A
F
--
K
MTAR----NYPDGK-GP-------LGTSA----------GDSF-VPG-
P
V
V
K
V
YPAPR----------------------------------------------------------
33
SP3
67.78
16%
-
- C8 -
-
2ILA
-
?
?:
[5-151]
--------------------------------------------------------------------------------------------------------------------------------------------------------------N
V
K
Y
N
F
M
R
IIKYE
F
I
L
N
D
A
---
L
N
Q
S
I
I
------
R
A
N
A
Q
-
Y
L
T
A
A
A
------------
L
H
N
L
D
E
A
V
K
F
D
M
G
A
Y
K
S
-
S
A
K
-----------------
I
T
V
I
L
R
I
S
K
T
Q
L
Y
--
V
T
A
Q
----
D
E
---------------
D
Q
P
-
V
L
L
--
K
--
E
M
P
EIPKT
I
T
-
G
S
---
E
----
T
N
L
L
-------
F
F
W
E
T
H
G
T
K
-
N
Y
F
----
T
S
---
V
A
H
P
N
L
F
--
I
A
T
K
Q
----
D
Y
W
V
C
L
-
A
G
-------
G
P
P
S
I
----------
T
D
-
F
-
Q
----
I
L
-----------------------------------------------------------------
20
Fugue
47.73
15%
-
- C9 -
-
3EMI
-
?
A:
[313-422]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------T
E
V
K
I
---
G
A
K
T
S
V
------
M
K
E
K
D
-
G
K
L
F
T
G
------------
K
A
N
K
E
T
N
---------
K
-
V
D
G
-----------------
A
N
------
A
T
E
D
-----
A
D
----
E
G
K
G
L
-----------
V
T
A
K
-
D
V
I
--
D
--
A
V
N
-----
K
---------------
T
-------
G
W
R
I
K
T
T
D
--
A
N
G
----
Q
N
---
G
D
F
A
T
V
A
--
S
G
T
N
V
----
T
F
A
S
G
N
-
G
----------
T
T
A
----------
T
V
T
N
-
G
T
D
-
G
I
T
V
K
Y
D
A
K
-----------------------------------------------------------
23
Fugue
47.07
14%
-134
* C12 *
-
1L8C
-
A:
[1-95]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
A
---
D
P
E
K
R
K
------
L
I
Q
Q
Q
-
L
V
L
L
L
H
------------
A
H
K
C
Q
R
R
---------
E
-
Q
A
N
-----------------
G
E
------
V
R
A
C
----------------------------
S
L
P
-
H
C
R
--
T
--
M
K
N
-----
V
L
-
N
H
---
M
----
T
H
------------
C
Q
A
G
K
A
C
Q
V
A
----
H
C
---
A
S
S
R
Q
I
I
--
S
H
W
K
N
-----
C
T
R
H
D
-
C
P
---------
V
C
L
----------
P
L
K
N
-
A
S
D
-
K
R
------------------------------------------------------------------
26
Fugue
46.88
16%
20
* C8 *
-
1QBA
-
?
?:
[174-310]
---------------------------------------------------------------------------------------------------------------------------------------------------------------
S
N
AD
L
Q
T
L
PAGALRG
K
I
V
---
P
T
P
M
Q
V
------
K
V
H
A
Q
-
D
A
D
L
R
K
GVA---------
L
D
L
S
T
L
V
---------
K
-
P
A
A
-----------------
D
V
------
V
S
Q
R
F
--
A
L
L
G
----
V
P
V
Q
T
-----------
N
G
Y
P
-
I
K
T
--
D
I
Q
P
G
K
-----
F
K
-
G
A
---
M
----
A
V
S
G
-------
A
Y
E
L
K
I
G
K
K
E
A
Q
V
----
I
G
---
F
D
-
Q
A
G
V
--
F
Y
G
L
Q
----
S
I
L
S
L
V
-
P
S
-------
D
G
S
G
-----------------
K
I
-
A
T
L
D
A
S
D
A
P
R
----------------------------------------------------------
21
Fugue
44.32
17%
4
- C8 -
-
1HP5
-
?
A:
[14-156]
------------------------------------------------------------------------------------------------------------------------------------------------------------------DRKAPVRPTPLD
R
V
I
---
P
A
P
A
S
V
------
D
P
G
G
A
-
P
Y
R
I
T
R
------------
G
T
H
I
R
V
D
---------
D
-
S
R
E
-----------------
A
R
------
R
V
G
D
Y
--
L
A
D
L
----
L
R
P
A
T
GYRLPVTAHGH
G
G
I
R
-
L
R
L
--
A
--
G
G
P
-----
Y
G
-------------
D
E
-------
G
Y
R
L
D
S
G
P
A
G
V
T
I
----
T
A
RK
A
A
G
L
F
H
G
V
--
Q
T
L
R
Q
----
L
L
P
P
A
V
-
E
K
-------
D
S
A
Q
P
----------
G
P
W
L
-
V
A
---
G
G
T
I
E
D
T
P
R
----------------------------------------------------------
2
PsiBlast_PDB
42.96
32%
-60
- C11 -
-
1ND2
-
?
C:
[116-171]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
S
F
M
------
F
C
G
T
A
-
N
T
T
L
K
V
------------
L
L
A
Y
T
P
P
---------
G
I
G
K
P
-----------------
R
S
------
R
K
E
A
M
--
L
G
T
H
----
V
V
W
D
V
-----------
G
L
Q
S
-
T
V
S
--
L
--
V
V
P
-----
W
I
-
S
------------------------------------------------------------------------------------------------------------------------------------------------------------------------
3
PsiBlast_PDB
42.73
32%
-59
- C11 -
-
1ND3
-
?
C:
[116-171]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
S
F
M
------
F
C
G
T
A
-
N
T
T
L
K
V
------------
L
L
A
Y
T
P
P
---------
G
I
G
K
P
-----------------
R
S
------
R
K
E
A
M
--
L
G
T
H
----
V
V
W
D
V
-----------
G
L
Q
S
-
T
V
S
--
L
--
V
V
P
-----
W
I
-
S
------------------------------------------------------------------------------------------------------------------------------------------------------------------------
1
PsiBlast_PDB
41.20
32%
-56
- C11 -
-
1NCR
-
?
C:
[116-171]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
S
F
M
------
F
C
G
T
A
-
N
T
T
L
K
V
------------
L
L
A
Y
T
P
P
---------
G
I
G
K
P
-----------------
R
S
------
R
K
E
A
M
--
L
G
T
H
----
V
V
W
D
V
-----------
G
L
Q
S
-
T
V
S
--
L
--
V
V
P
-----
W
I
-
S
------------------------------------------------------------------------------------------------------------------------------------------------------------------------
9
PsiBlast_PDB
40.48
38%
-52
- C13 -
-
3KW8
3
?
A:
[10-40]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
L
--
K
M
Y
A
E
----
K
L
A
D
G
Q
-
M
G
-------
Y
G
F
E
K
----------
G
K
A
S
-
V
P
G
-
P
L
I
E
V
---------------------------------------------------------------
5
PsiBlast_PDB
40.25
38%
-50
- C13 -
-
4GYB
3
?
A:
[51-81]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
L
--
K
M
Y
A
E
----
K
L
A
D
G
Q
-
M
G
-------
Y
G
F
E
K
----------
G
K
A
S
-
V
P
G
-
P
L
I
E
V
---------------------------------------------------------------
34
SP3
40.11
17%
19
* C10 *
-
1KBL
-
PPDK_CLOSY
A:
[376-508]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------L
H
P
T
---
F
N
P
A
A
L
------
K
A
G
E
V
-
I
G
S
A
L
P
------------
A
S
P
G
A
A
A
---------
G
-
K
V
Y
-----------------
F
T
------
A
D
E
A
K
--
A
A
H
E
----
K
G
E
R
V
-----------
I
-----
L
V
R
L
E
--
T
S
P
E----
D
I
-
E
G
---
M
----
H
A
A
E
-------
G
I
L
T
V
R
G
G
M
T
S
H
A
A
V
V
A
R
G
---
M
G
T
C
C
V
S
--
G
C
G
E
I
----
K
I
N
E
E
A
-
K
T
-------
F
-
E
L
G
----------
G
H
T
F
-
A
E
G
-
D
Y
I
S
L
-
D
G
S
T
G
K
I
Y
K
G
D
---------------------------------------------------
25
Fugue
39.81
13%
30
- C9 -
-
2E3V
2
NCAM1_HUMAN
A:
[6-110]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
S
G
P
---
S
S
P
S
I
D
------
Q
V
E
P
Y
-
S
S
T
-
A
Q
------------
V
Q
F
D
E
P
E
---------
A
-
T
V
P
-------------------------
I
L
K
Y
K
--
A
E
W
R
----
A
V
G
E
E
-----------
V
W
H
S
-
K
W
Y
--
D
--
A
K
E
-----
A
S
M
E
G
---
I
----
V
T
I
V
-------
G
L
K
-------------------
P
E
T
T
Y
A
V
--
R
L
A
A
L
----
N
G
K
G
L
G
-
E
I
-------
S
A
A
S
E
----------
F
K
T
Q
-
P
V
R
-
E
-------
P
S
----------------------------------------------------------
10
PsiBlast_PDB
39.78
38%
-54
* C13 *
-
4GXF
1
?
A:
[14-44]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
L
--
K
M
Y
A
E
----
K
L
A
D
G
Q
-
M
G
-------
Y
G
F
E
K
----------
G
K
A
S
-
V
P
G
-
P
L
I
E
V
---------------------------------------------------------------
6
PsiBlast_PDB
39.53
38%
-44
- C13 -
-
4NAJ
3
?
A:
[51-81]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
L
--
K
M
Y
A
E
----
K
L
A
D
G
Q
-
M
G
-------
Y
G
F
E
K
----------
G
K
A
S
-
V
P
G
-
P
L
I
E
V
---------------------------------------------------------------
7
PsiBlast_PDB
38.92
38%
-39
- C13 -
-
4NB7
3
?
A:
[51-81]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
L
--
K
M
Y
A
E
----
K
L
A
D
G
Q
-
M
G
-------
Y
G
F
E
K
----------
G
K
A
S
-
V
P
G
-
P
L
I
E
V
---------------------------------------------------------------
8
PsiBlast_PDB
38.90
38%
-44
- C13 -
-
4GY4
1
?
A:
[13-43]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
L
--
K
M
Y
A
E
----
K
L
A
D
G
Q
-
M
G
-------
Y
G
F
E
K
----------
G
K
A
S
-
V
P
G
-
P
L
I
E
V
---------------------------------------------------------------
28
Fugue
38.64
17%
60
* C9 *
-
5FAA
1
?
A:
[149-271]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
T
T
Y
---
E
R
T
F
V
K
------
K
D
A
E
T
-
K
E
V
L
E
G
A
G
F
K
I
S
N
SDG
K
F
L
K
L
T
D
K
D
---------
G
-
Q
S
V
-----------------
S
I
------
G
E
G
F
I
--
D
V
L
A
----
N
N
Y
R
L
-----------
T
W
V
A
--
E
S
--
D
--
A
T
V
-----
F
T
-
S
D
KSG
K
----
F
G
L
N
-------
G
F
A
D
N
T
T
T
--------------------
Y
--
T
A
V
E
T
----
N
V
P
D
G
Y
-
D
A
----------
A
A
----------
N
T
D
F
K
A
D
N
-
S
S
S
D
I
L
D
A
P
S
----------------------------------------------------------
37
SP3
38.57
22%
53
- C5 -
-
1EX2
1
MAF_BACSU
A:
[1-185]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------M
T
K
P
L
I
L
A
S
Q
S
P
R
R
K
E
L
L
D
L
L
Q
L
P
Y
S
I
I
V
S
E
------------
V
E
E
K
L
N
R
---------
N
-
F
S
P
E
E
N
V
Q
W
L
A
K
Q
K
A
K
A
V
A
D
L
H
------
P
H
A
I
V
--
I
G
A
D
T
M
V
C
L
D
G
E
C
-----------
L
G
K
P
Q
D
Q
E
--
E
--
A
A
S
-----
M
L
-
R
R
---
L
SG
R
S
H
S
V
I
T
A
V
S
I
Q
A
E
N
H
S
E
T
F
Y
D
K
T
E
V
----
A
F
---
W
S
L
S
E
E
E
I
W
T
Y
I
E
T
----
K
E
P
M
D
K
A
G
A
-------
Y
G
I
Q
G
RGALFVKKID
G
D
Y
Y
S
V
M
G
L
P
I
S
K
T
M
R
A
L
R
H
F--------------------------------------------------------
29
Fugue
37.85
28%
3
- C4 -
-
5EGS
3
ANM6_HUMAN
A:
[40-376]
TK
R
E
R
D
Q
L
Y
Y
E
C
Y
SD
V
S
V
H
E
E
M
I
A
D
R
V
R
T
D
A
Y
R
L
G
I
L
R
N
WAALRG
K
T
V
L
D
V
GAGTG
I
L
S
I
F
C
A
Q
A
GAR
R
V
Y
A
V
E
ASAI
W
Q
Q
A
R
E
V
V
R
F
N
GLEDR
V
H
V
L
P
G
P
VETVELPEQVD
A
I
V
S
EWMGYGLLHESM
L
S
S
V
L
H
A
R
T
K
WLKEGGLLLPA
S
A
E
L
F
I
V
P
I
SD
Q
M
L
E
W
R
L
G
FWSQVK
Q
H
Y
---
G
V
D
M
S
C
------
L
E
G
F
A
-
T
R
C
L
M
G
HS
E
---------
I
V
V
Q
G
L
S
---------
G
-
E
D
V
-----------------
L
A
------
R
P
Q
R
F
--
A
Q
L
E
----
L
S
R
A
-------------
G
L
E
-
Q
E
L
--
E
--
A
G
-------
V
-
G
G
---
R
----
F
R
C
S
-------
C
Y
--------
G
S
A
----
P
M
---
H
G
F
A
I
W
F
--
Q
V
T
F
-------
P
G
G
E
-
K
P
-------
L
V
L
S
T
----------
S
-----------
P
F
H
P
A
T
H
WK
Q
A
L
L
Y
L
N
E
P
V
Q
V
E
QD
T
D
V
S
G
E
I
T
L
L
P
SRDNPR
R
L
R
V
L
L
R
Y
K
V
GDQ
E
E
K
T
K
D
F
A
MED
35
SP3
37.78
15%
62
- C7 -
-
1ENW
-
A:
[1-114]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
S
H
-
M
P
R
N
S
K
------------
N
D
G
V
D
T
A
---------
I
-
Y
H
H
-----------------
K
L
------
R
D
Q
V
L
K
A
L
Y
D
V
----
L
A
K
E
S
-----------
E
H
P
P
-
Q
S
I
--
L
--
H
T
-------
A
-
K
A
---
I
--------------------
E
S
E
M
N
K
V
N
----
N
C
---
D
T
N
E
A
A
Y
--
K
A
R
Y
R
I
I
Y
S
N
V
I
S
K
N
-
N
P
DLKHKIA
N
G
D
I
T
----------
P
E
F
L
-
A
T
C
-
D
A
K
D
L
A
P
A
P
-----------------------------------------------------------