@TOME V2.3
(Mar 2018)
Ref.
-
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Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
Show Ligands of Templates
Complexes Affinity Score
Main Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Complexes Tab
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : MGG_16416T0: (2018-03-19 )
FPAVIIATKLPIFPAVVGTDQFRITPFPSLPGKPASYGFHSRLVHVKGQRLCECYRYKRNQQNNGWQLIRHSTEVILPETYRLVMGIALYFGRDCSTSFVVATTLPKGINSNPNSEAESESWWSSSPTDN
Atome Classification :
(20 SA)
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------........----.10..---.......-20.--..------.---.-----.--..30........---40.....-----.-.------.50---.........60....-..--..70...---.------.--------...80.........90...-...--..---.100......-.110.------..------....120-..--..-...130----------------------------------------------------------------------------------------------------------------------------------------------------
(Atome)
(Ident)
(Tito)
(Num)
(QMean)
(Ligand)
(Uniprot)
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------F
P
A
V
I
I
A
T----KL-PI---
F
P
A
VVGT-D
Q
F
--
R
I------T---P-----F--PSLPGKPASYGF---H
S
R
L
V
H
V
-----
K
-
G
------
Q
R
----
L
C
E
C
Y
R
Y
KRNQQNN
G
-
W
Q
--
L
I
RHS
T
E
---
V
------I--------L
P
E
T
-
Y
R
L
V
M
G
I
A
L
Y
-FGR-DCS--T
S
---
F
V
V
A
TTLPKG-INSNP------NS------EAESESW-WS--SS-PTDN------------------------------------------------------------------------------------------------------------------------------------------------------
38
Fugue
61.85
25%
23
- C9 -
-
3WRY
1
?
A:
[8-431]
S
P
R
V
F
C
I
G
TADTK
F
D
E
L
R
F
L
S
E
H
V
R
S
S
L
N
S
F
S
N
KS
S
F
K
V
G
V
T
V
V
D
VSTSWKETNSCADFDFVP
S
K
D
V
L
S
C
HTLGEETMGTFAD
T
R
G
L
A
I
A
I
M
S
K
A
L
E
T
F
L
S
I
A
N
D
E
Q
NLA
G
V
I
G
L
G
G
S
G
G
T
S
L
L
S
S
A
F
R
S
LPIGI
P
K
V
I
ISTVASGQTESYIGTSD
L
V
L
F
P
SVVDICGIN
N
V
S
K
V
V
L
S
N
A
G
A
A
F
A
G
M
V
I
G
R
L
E
SK
F
T
V
G
V
T
M
F
GVT
T
P
C
V
N
A
V
K
E
R
L
V
K
E
G
Y
E
T
L
V
F
H
AT
G
V
G
G
R
A
M
E
D
L
V
R
G
GFIQGVLDITTT
E
V
A
D
Y
V
VGGVM
A
C
D
SSR
F
-
D
A
I
L
E
K
----
K
I
-
P
L
---
V
L
S
V
G
A
L
-
D
M
V
--
N
F
------
G
---
P
-----
K
--
T
T
I
P
-----
P
E
F
---
Q
Q
R
K
I
H
E
-------------------------------
H
N
E
Q
-
V
S
--
L
M
R
T
T
---------------------
V
G
E
N
-
K
K
F
A
A
F
I
A
E
K
-
L
N
K
--
A
S
--
S
S
-----
V
C
V
C
L
P
E
K
-
G
V
S
A
L
------
D
--------
A
P
G
K
D
F
-
Y
D
--
P
E
-
A
T
S
C
L
T
R
E
L
Q
M
L
L
E
NNER
C
Q
V
K
V
L
PYHIND
A
E
F
A
N
A
L
V
D
S
F
L
E
I
S
PK-----------------------------------------------------------------------------------------------------------
41
SP3
55.31
20%
13
* C9 *
-
1GD0
2
MIF_HUMAN
A:
[1-118]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
P
M
F
I
V
N
T
----
N
V
-
P
-----
R
A
S
V
-
P
-
D
G
F
L
S
E
L
------
T
---
Q
Q
----
L
--
A
Q
A
T
G
K
P
P
Q
Y
I
-------
A
V
H
V
-----
V
P
D
------
Q
L
----
M
------
A
F
G
G
S
S
E
P
C
A
L
--
C
S
L
H
S
I
G
---
K
------
I
--------
G
G
A
Q
-
N
R
S
Y
S
K
L
L
C
G
-
L
---------------
L
A
E
R
L
--
R
-
I
S
P
D
R
V
Y
I
N
Y
Y
D
M
------
N
A
A
N
V
G
W
-
N
N
--
S
T
F
A
L
E
H
H-----------------------------------------------------------------------------------------------------------------------------------------------------
48
SP3
52.33
16%
6
- C9 -
-
1CPO
2
?
?:
[2-120]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
E
P
G
S
G
I
G
Y
PYDN
N
T
-
L
P
---
Y
V
A
P
G
P
T
-
D
----
S
R
------
A
---
P
-----
C
--
P
A
L
-
N
A
L
A
N
H
G
Y
---
I
P
H
--
D
G
-----
R
-
A
------
I
S
----
R
E
T
L
Q
N
A
F
L
N
H
M
G
----------
I
A
N
S
---
V
------
I
--------
E
L
A
L
-
T
N
A
F
V
V
C
E
Y
V
-
T
G
S
-
D
C
G
--
D
S
---
L
V
N
L
T
L
L
------
A
E
P
------
H
A
------
F
E
H
D
H
S
F
-
S
R
--
K
D
-
Y
K
Q
G
VA----------------------------------------------------------------------------------------------------------------------------------------------------
2
PsiBlast_PDB
51.32
27%
-21
- C7 -
-
5HB4
-
NU192_CHATD
B:
[231-457]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
P
S
Q
L
G
A
-
R
Q
W
--
L
Q
------
R
---
K
-----
I
--
P
S
L
P
S
E
P
F
P
F
S
H
FLQ
H
S
L
M
V
H
L
-----
E
-
G
FVDATI
S
N
----
L
P
D
V
L
R
K
L
R
T
E
E
D
E
Q
-
R
Q
--
L
R
P
N
H
E
Q
---
D
------
M
--------
D
L
E
R
-
F
L
I
I
I
S
Y
A
-
Y
-
E
G
R
P
D
A
A
--
M
S
---
F
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
37
Fugue
50.91
13%
25
- C8 -
-
4JRB
6
?
A:
[3-416]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------HMS
K
G
E
E
L
F
T
G
V
V
P
I
L
V
E
L
D
G
D
V
NGH
K
F
S
V
S
G
E
G
E
G
D
ATYG
K
L
T
L
K
F
I
C
TTGKLPVPWPTLVTTFVQCFARYPDHMKQHD
F
F
K
S
A
MPE
G
Y
V
Q
E
R
T
I
F
F
KD
D
G
N
Y
K
T
R
A
E
V
K
----
F
E
G
D
T
---
L
V
N
R
I
E
L
-
K
G
I
--
D
F
------
K
---
E
-----
D
--
G
N
I
L
G
H
K
L
E
Y
N
Y
---
N
S
H
N
V
Y
I
-----
M
-
A
------
D
K
QKN
G
I
K
V
N
F
K
I
R
H
N
I
E
D
G
S
-
V
Q
--
L
A
D
H
Y
Q
Q
---
N
------
T
P
IGD
G
P
V
L
L
P
D
N
-
H
Y
L
S
T
Q
S
A
L
S
-
K
D
P
-
N
E
K
RD
H
M
---
V
L
L
E
F
V
T
A
A
G
-
I
A
A
A
R
------
N
L
------
Q
D
D
L
Q
D
F
-
L
A
--
L
I
-
P
V
D
Q
I
I
A
I
A
T
D
Y
L
A
ND
A
E
V
Q
A
A
V
A
Y
L
Q
S
D
E
F
E
T
I
V
V
A
L
D
A
L
P
E
L
Q
N
F
L
N
F
L
E
A
N
GLN
A
I
D
F
L
N
G
IHHIRRGVG
I
T
G
L
I
D
D
V
L
A
I
LP
I
E
D
L
K
A
L
F
N
E
K
L
E
TS
P
D
F
L
A
L
Y
N
A
I
R
S
P
E
F
Q
S
I
V
Q
T
L
N
A
M
P
E
Y
Q
N
L
L
Q
K
L
R
E
K
GVD
V
D
K
I
I
E
L
I
R
A
L
F
1
PsiBlast_PDB
50.87
27%
-7
- C7 -
-
4KNH
5
NU192_CHATD
A:
[394-528]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
P
S
Q
L
G
A
-
R
Q
W
--
L
Q
------
R
---
K
-----
I
--
P
S
L
P
S
E
P
F
P
F
S
H
F
L
Q
H
S
L
M
V
H
L
-----
E
-
G
F
V
D
A
T
I
S
N
----
L
P
D
V
L
R
K
L
R
T
E
E
D
E
Q
-
R
Q
--
L
R
P
N
H
E
Q
---
D
------
M
--------
D
L
E
R
-
F
L
I
I
I
S
Y
A
-
Y
-
E
G
R
P
D
A
A
--
M
S
---
F
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
40
SP3
49.28
16%
41
- C8 -
-
1WID
-
RAV1_ARATH
A:
[182-298]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
R
S
A
E
A
L
F
E
----
K
--
A
V
---
T
P
S
D
V
G
K
L
N
R
L
--
V
I
P
K
H
H
A
E
K
---
H
-----
F
--
P
L
P
S
S
N
V
S
V
K
G
V
---
L
L
N
F
E
D
V
-----
N
-
G
------
K
V
----
W
--
R
F
R
Y
S
Y
W
N
S
S
Q
S
-
Y
V
--
L
T
K
G
W
S
R
---
F
------
V
----------
K
E
-
K
N
L
R
A
G
D
V
V
S
-
F
S
R
-
S
N
G
--
Q
D
---
Q
Q
L
Y
I
----
G
-
W
K
S
R
S
------
G
S
------
D
L
D
A
---------------------------------------------------------------------------------------------------------------------------------------------------------------------
44
SP3
49.14
16%
1
- C9 -
-
1DPT
-
DOPD_HUMAN
A:
[1-117]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
P
F
L
E
L
D
T
----
N
L
-
P
A
-----
N
R
V
P
A
-
G
-
L
E
K
R
L
------
C
---
A
A
----
A
--
A
S
I
L
G
K
P
A
D
R
-------
V
N
V
T
V
-----
R
P
G
------
L
A
----
M
----
A
L
S
G
S
T
E
P
C
A
-
Q
L
--
S
I
S
S
I
G
V
---
V
------
G
--------
T
A
E
D
-
N
R
S
H
S
A
H
F
F
E
-
F
---------------
L
T
K
E
L
--
A
-
L
G
Q
D
R
I
L
I
R
F
F
P
L
------
E
S
W
Q
I
G
K
-
I
G
--
T
V
-
M
T
F
L
------------------------------------------------------------------------------------------------------------------------------------------------------
49
SP3
49.04
20%
54
- C8 -
-
1GH7
-
IL3RB_HUMAN
A:
[104-225]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
T
Q
H
V
----
Q
P
-
P
E
PRD
L
Q
I
S
T
D
Q
-
D
H
F
--
L
L
------
T
---
W
-----
S
--
V
A
L
G
S
P
Q
S
H
W
L
S
---
P
G
D
L
E
F
E
------------------------
V
V
Y
K
R
L
Q
--
D
S
-
W
E
DA
A
I
L
L
S
N
T
S
Q
A
T
------
L
--------
G
P
E
H
------------
L
M
P
-
S
S
T
--
Y
V
---
A
R
V
R
T
R
L
A
P
G
S
R
L
S
G
R
------
P
S
------
K
W
S
P
E
V
C
-
W
D
--
S
Q
-
P
G
D
-------------------------------------------------------------------------------------------------------------------------------------------------------
43
SP3
47.45
17%
39
- C9 -
-
1HFO
-
MIFH_TRISP
A:
[1-113]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
P
I
F
T
L
N
T
----
N
I
-
K
A
----
T
D
V
--
P
-
S
D
F
L
S
S
T
------
S
---
A
L
----
V
--
G
N
I
L
S
K
P
G
S
Y
V
-------
A
V
H
I
-----
N
T
D
------
Q
Q
----
L
------
S
F
G
G
S
T
N
P
A
A
F
--
G
T
L
M
S
I
G
---
G
------
I
--------
E
P
S
R
-
N
R
D
H
S
A
K
L
F
D
-
H
---------------
L
N
T
K
L
--
G
-
I
--
P
K
------
N
R
M
Y
I
H
F
V
N
L
N
G
D
D
V
G
W
N
--
G
T
-
T
F
--------------------------------------------------------------------------------------------------------------------------------------------------------
47
SP3
46.47
14%
47
- C8 -
-
1WIC
-
A:
[1-152]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
S
S
G
S
S
G
----
K
K
-
P
L
-----
S
V
F
K
G
-
P
L
L
--
H
I
------
S
---
P
AEELY
F
--
G
S
I
E
S
G
E
K
K
T
-----
L
I
V
L
T
N
V
-----
T
-
K
------
N
I
----
V
A
----
F
K
V
R
T
T
A
P
E
-
K
Y
--
R
V
K
P
S
N
S
---
S
------
C
--------
D
P
G
A
--
S
I
D
I
I
V
S
P
H
-
G
G
L
-
T
V
S
--
A
Q
D
R
F
L
I
M
A
A
E
M
E
Q
S
-
S
G
T
G
---------------
P
A
E
L
S
Q
F
-
W
K
--
E
V
-
P
R
N
K
V
M
E
H
R
L
R
C
HTVESSKPN
S
L
M
L
S
G
P
SSG---------------------------------------------------------------------------------------------------------------------------
27
HHSearch
46.18
70%
-516
- C2 -
-
2DBS
-
?
B:
[27-36]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
E
--------
L
P
P
T
-
Y
R
L
V
L
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
39
Fugue
42.06
16%
-28
- C9 -
-
4EYT
-
?
A:
[10-106]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------K
Q
N
C
L
I
K
I
I
----
N
I
-
P
-----------------
Q
G
------
T
---
L
-----
K
--
A
E
V
V
L
A
V
R
H
L
G
Y
---
E
F
Y
C
D
Y
I
-----
D
-
G
------
Q
A
----
M
I
R
F
Q
N
--
S
D
E
Q
R
L
A
-
I
Q
--
K
L
L
N
H
N
N
---
N
------
K
--------
L
Q
I
E
-
I
R
---------------
G
--
Q
I
---
C
D
V
I
S
T
I
P
----------------------
E
D
E
E
K
N
Y
-
W
N
--
Y
I
-
K
F
K
K
N-----------------------------------------------------------------------------------------------------------------------------------------------------
46
SP3
39.86
13%
67
* C8 *
-
1WK0
-
A:
[1-137]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GSSGSSGD
E
E
T
K
A
F
E
A
L
L
S
N
I
----
V
K
-
P
V
---
A
S
D
-
I
Q
A
-
R
T
V
--
V
L
------
T
W
S
P
P
-----
S
--
S
L
I
N
G
E
T
D
E
S
S
V
---
P
E
L
Y
G
Y
E
------------------------
V
L
I
S
S
T
G
K
D
G
K
-
Y
K
--
S
V
Y
V
G
E
E
---
T
N
I
T
L
N
D
L
--------
K
P
A
M
D
Y
H
A
K
V
-
Q
A
E
Y
-
N
S
I
-
K
G
T
--
P
S
---
E
A
E
I
F
T
T
L
S
C
-
E
P
D
I
P
------
N
P
------
P
R
-------
I
--
S
G
-
P
S
S
G
------------------------------------------------------------------------------------------------------------------------------------------------------
4
PsiBlast_PDB
39.68
29%
-106
- C7 -
-
4LWD
-
CAR11_HUMAN
A:
[43-95]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
D
E
D
--
E
V
------
L
---
N
-----
A
--
P
M
L
P
S
K
I
N
R
A
G
R
---
L
L
D
I
L
H
T
-----
K
-
G
------
Q
R
------------------
G
-
Y
V
--
V
F
L
E
S
L
E
---
F
------
Y
--------
Y
P
E
L
-
Y
K
L
V
T
G
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
3
PsiBlast_PDB
39.53
29%
-101
- C7 -
-
4I16
-
CAR11_MOUSE
A:
[39-91]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
D
E
D
--
E
V
------
L
---
N
-----
A
--
P
M
L
P
S
K
I
N
R
A
G
R
---
L
L
D
I
L
H
T
-----
K
-
G
------
Q
R
------------------
G
-
Y
V
--
V
F
L
E
S
L
E
---
F
------
Y
--------
Y
P
E
L
-
Y
K
L
V
T
G
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
45
SP3
37.84
10%
31
- C8 -
-
1UGK
-
A:
[1-138]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GS
S
G
S
S
G
L
G
T
L
F
F
S
L
----
E
Y
---------
N
F
E
R
-
K
A
F
--
V
V
------
N
---
I
-----
K
E
A
R
G
L
P
A
M
D
E
Q
S
M
T
---
S
D
P
Y
I
K
M
T
ILPE
K
-
K
------
H
K
----
V
K
T
--
R
V
L
R
K
T
L
D
P
A
-
F
D
--
E
T
F
T
F
Y
G
---
I
------
P
--------
Y
T
Q
I
-
Q
E
L
A
L
H
F
T
I
L
S
F
D
R
-
F
S
R
--
D
D
---
I
I
G
E
V
L
I
P
---
L
S
G
I
E
------
L
S
------
E
G
K
M
L
M
N
-
R
E
I
I
S
G
-
P
S
S
G
------------------------------------------------------------------------------------------------------------------------------------------------------
6
PsiBlast_PDB
36.04
50%
-131
- C12 -
-
4TSH
-
?
B:
[60-105]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
R
-
D
E
T
--
T
S
---
F
V
L
V
D
P
L
P
S
G
-
Y
Q
F
N
P
------
E
A
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
5
PsiBlast_PDB
35.28
50%
-131
* C12 *
-
3QE5
1
PAC_STRMG
A:
[61-84]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
R
-
D
E
T
--
T
S
---
F
V
L
V
D
P
L
P
S
G
-
Y
Q
F
N
P
------
E
A
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
13
HHSearch
35.16
23%
-105
- C6 -
-
1KCQ
-
A:
[3-50]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Q
R
L
F
Q
V
-----
K
-
G
------
R
R
----
V
V
R
A
T
-----
E
V
P
V
S
-
W
E
--
S
F
N
N
G
D
C
---
F
------
I
--------
L
D
L
G
-----
N
N
I
H
Q
W
-
C
G
S
-
N
S
N
--
R
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------