@TOME V2.3
(Mar 2018)
Ref.
-
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Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
Show Ligands of Templates
Complexes Affinity Score
Main Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Complexes Tab
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : M_TH16_EuGene_00103581: (2018-03-21 )
PPKYTTMCMVHVATPWDPTGNQMKYQKKAPSKLELHLWDNTKDASDVYRGFPNGACEVQMEKEFPSGYRRAGTILLTPMTDTGAPGRYLHGKSCVPRPNFRPTCARALAARLWQIACIAALEGFYKV
Atome Classification :
(20 SA)
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------....--.-.-...10..-......20-.......-----..30.----.......40........50-....--....--.------60--.......-..70..-...-...80........90.....---...100........110-...----.--...120.....
(Atome)
(Ident)
(Tito)
(Num)
(QMean)
(Ligand)
(Uniprot)
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PPK
Y
--
T
-
T
-
M
C
M
V
H
VA-TPWDPTG--NQ
M
K
Y
QK-----KAP
S
K
----
L
E
L
H
L
WDNTK
D
A
S
D
V
Y
RG--FPNG--
A
C
E
V
--
Q
------
M
---
E
KEFPSG-Y
R
R
A
G
T
-
I
L
L
-
T
PMTDTGAPGRYLHGKSCVP---RPNF
R
-
P
T
C
A
R
A
L
A
A
R
L
-
W
Q
I
----
A
--
C
I
A
A
L
E
G
F
YKV
27
Fugue
66.82
18%
-115
- C2 -
-
1QAX
-
MVAA_PSEMV
A:
[111-220]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
L
-
M
-
H
A
Q
V
Q
I
V
-
G
I
Q
D
P
L
N
--
A
R
L
S
L
L
R
-----
R
---
K
----
D
E
I
I
E
L
A
N
R
K
D
Q
L
L
N
S
L
G
----
G
G
--
C
R
D
I
--
E
------
V
---
H
T
F
A
D
T
P
-
R
G
P
M
L
V
-
A
H
L
-
I
-
V
D
V
R
D
A
M
G
--------------
A
N
T
V
-
N
T
M
A
E
A
V
A
P
L
M
-
E
A
I
TGGQ
V
--
R
L
R
I
L
S
N
L
A
D
L
33
SP3
61.31
18%
-14
- C2 -
-
1I2D
2
MET3_PENCH
A:
[2-573]
ANAPHGGVLKDLLARDAPRQAELAAEAESLPAVTLTERQLCDLELIMNGGFSPLEGFMNQADYDRVCEDNRLADGNVFSMPITLDASQEVIDEKKLQAGSRITLRDFRDDRNLAILTIDDIYRPDKTKEAKLVFGGDPEHPAIVYLNNTVKEFYIGGKIEAVNKLNHYDYVALRYTPAELRVHFDKLGWSRVVAFQTRNPMHRAHRELTVRAARSRQANVLIHPVVGLTKPGDIDHFTRVRAYQALLPRYPNGMAVLGLLGLAMRMGGPREAIWHAIIRKNHGATHFIVGRDHAGPGSNSKGEDFYGPYDAQHAVEKY
K
D
E
L
GI
E
-
V
-
V
E
F
Q
M
V
T
---
Y
L
P
D
T
--
D
E
Y
R
P
V
D
-----
Q
V
P
A
G
----
V
K
T
L
N
I
S
G
T
E
L
R
R
R
L
R
S
G
AH
I
P
E
W
FS
Y
P
E
V
VK
I
------
L
---
R
E
S
N
P
P
R
-
A
T
Q
G
F
T
-
I
F
L
-
T
-----
G
Y
M
N
---
S
G
K
-------------
D
A
I
A
R
A
L
Q
V
T
L
-
N
Q
Q
-------------
G
G
R
S
V
21
Fugue
55.58
13%
19
* C2 *
-
1BQG
-
?
?:
[12-143]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G
A
P
V
I
--
T
-
D
-
L
K
V
V
P
V
A
-
G
H
D
S
M
L
L
--
N
L
S
G
A
H
G
-----
P
L
F
T
R
----
N
I
L
I
L
T
D
S
S
G
-----------
H
V
G
--
V
G
E
V
--
P
------
G
---
G
E
G
I
R
K
T
-
L
E
D
A
R
H
-
L
L
I
N
Q
S
I
G
N
Y
Q
S
L
L
N
K
V
R
N
A
F
--
A
---
D
L
R
I
A
-
V
H
A
V
T
A
V
E
S
A
L
-
L
D
L
----
L
--
G
Q
H
L
Q
V
P
V
A
A
L
28
Fugue
54.32
16%
-11
- C2 -
-
1BD3
-
UPP_TOXGO
A:
[20-243]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QEESILQDIITRFPNVVLMKQTAQLRAMMTIIRDKETPKEEFVFYADRLIRLLIEEALNELPFQKKEVTTPLDVSYHG
V
S
F
Y
--
S
-
K
-
I
C
G
V
S
I
V
-
R
A
G
E
S
M
E
--
S
G
L
R
A
V
C
-----
R
G
V
R
I
----
G
K
I
L
I
Q
R
D
E
T
T
A
E
---------------
P
K
--
L
------
I
---
Y
E
K
L
P
A
D
-
I
R
E
R
W
V
-
M
L
L
-
D
P
M
C
A
T
A
--
G
S
V
C
K
A
I
E
V
L
L
---
R
L
G
V
K
--------
E
E
R
I
-
I
F
V
----
N
--
I
L
A
A
P
Q
G
I
E
R
V
26
Fugue
52.20
16%
4
- C2 -
-
2RHK
-
NS1_I72A2
A:
[2-120]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------P
A
S
R
Y
--
I
-
T
D
M
T
I
E
E
L
S
-
R
D
W
------
F
M
L
M
P
K
Q
-----
K
V
E
G
P
----
L
C
I
R
I
D
Q
A
I
M
D
K
----------------
N
I
--
M
------
L
---
K
A
N
F
S
V
I
-
F
D
R
L
E
T
L
I
L
L
-
R
A
F
T
E
E
G
A
I
V
G
E
I
S
P
L
P
S
F
P
GHT
I
E
D
V
K
-
N
A
I
G
V
L
I
G
G
L
E
-
W
N
D
----
N
--
T
V
R
V
S
K
T
L
Q
R
F
40
SP3
49.23
13%
60
- C3 -
-
1DPE
-
?
?:
[1-507]
---------------------------------------------------------------------------------------------------------------------------------------------KTLVYCSEGSPEGFNPQLFISGTTYDASSVPLYNRLVEFKIGTTEVIPGLAEKWEVSEDGKTYTFHLRKGVKWHDNKEFKPTRELNADDVVFSFDRQKNAQNPYHKVSGGSYEYFEGMGLPELISEVKKVDDNTVQFVLTRPEAPFLADLAMDFASILSKEYADAMMKAGTPEKLDL
N
P
I
G
--
T
-
G
-
P
F
Q
L
Q
Q
----
Y
Q
K
-
D
--
S
R
I
R
Y
K
A
FDGYW
G
T
K
P
Q
----
I
D
T
L
V
F
S
I
T
P
D
A
S
V
R
Y
A
K
--
L
Q
K
N
--
E
C
Q
V
--
M
------
P
YPN
P
A
D
I
A
R
--
M
K
Q
D
K
S
-
I
N
L
-
M
E
M
P
G
L
N
V
G
Y
L
S
Y
N
V
Q
-------
K
K
P
L
D
D
V
K
V
R
Q
A
L
T
Y
A
V
N
K
D
A
----
I
--
I
K
A
V
Y
Q
G
A
G
V
S
2
PsiBlast_PDB
45.12
42%
-149
- C7 -
-
2E22
-
XANLY_BACGL
A:
[548-579]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
V
H
L
A
G
N
T
A
D
G
S
D
I
G
Y
Y
--
F
P
G
G
--
A
-
T
L
--
Q
------
T
---
K
R
E
A
R
T
G
--------------------------------------------------------------------------
4
PsiBlast_PDB
44.70
42%
-155
- C7 -
-
1J0N
-
XANLY_BACGL
A:
[548-579]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
V
H
L
A
G
N
T
A
D
G
S
D
I
G
Y
Y
--
F
P
G
G
--
A
-
T
L
--
Q
------
T
---
K
R
E
A
R
T
G
--------------------------------------------------------------------------
7
PsiBlast_PDB
44.63
42%
-150
* C7 *
-
1X1J
-
XANLY_BACGL
A:
[548-579]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
V
H
L
A
G
N
T
A
D
G
S
D
I
G
Y
Y
--
F
P
G
G
--
A
-
T
L
--
Q
------
T
---
K
R
E
A
R
T
G
--------------------------------------------------------------------------
35
SP3
44.27
14%
95
- C2 -
-
1U2E
-
MHPC_ECOLI
A:
[4-289]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YQ
P
Q
T
E
--
A
A
T
-
S
R
F
L
N
V
---
E
E
A
G
K
T
--
L
R
I
H
F
N
D
-----
C
G
Q
G
D
ETV-
V
L
L
H
G
S
G
P
G
A
T
G
W
A
N
F
S
R
--------------
N
------
I
---
D
P
L
V
E
A
G
-
Y
R
---
V
-
I
L
L
-----
D
--
C
P
G
---
W
G
K
S
--
D
---
S
V
V
N
S
-
G
S
R
S
D
L
N
A
R
I
L
-
K
S
V
----
V
--
D
Q
L
D
I
A
K
I
H
L
L
30
Fugue
44.24
45%
-353
- C2 -
-
2JO5
-
?
A:
[2-21]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
A
K
A
A
A
A
A
I
-
K
A
I
----
A
--
A
I
I
K
A
G
G
F
---
5
PsiBlast_PDB
44.07
42%
-148
- C7 -
-
1X1H
-
XANLY_BACGL
A:
[573-604]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
V
H
L
A
G
N
T
A
D
G
S
D
I
G
Y
Y
--
F
P
G
G
--
A
-
T
L
--
Q
------
T
---
K
R
E
A
R
T
G
--------------------------------------------------------------------------
3
PsiBlast_PDB
43.92
42%
-135
- C7 -
-
1J0M
-
XANLY_BACGL
A:
[548-579]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
V
H
L
A
G
N
T
A
D
G
S
D
I
G
Y
Y
--
F
P
G
G
--
A
-
T
L
--
Q
------
T
---
K
R
E
A
R
T
G
--------------------------------------------------------------------------
8
PsiBlast_PDB
43.88
25%
-122
- C2 -
-
3CR8
-
?
A:
[357-435]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
E
------
L
---
H
R
Q
T
P
P
R
-
E
R
Q
G
F
T
-
V
F
F
-
T
G
L
S
G
A
G
--------------------
K
-
S
T
L
A
R
A
L
A
A
R
L
-
M
E
M
----
G
GR
C
V
T
L
L
D
G
----
6
PsiBlast_PDB
43.81
42%
-152
- C7 -
-
1X1I
-
XANLY_BACGL
A:
[548-579]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
V
H
L
A
G
N
T
A
D
G
S
D
I
G
Y
Y
--
F
P
G
G
--
A
-
T
L
--
Q
------
T
---
K
R
E
A
R
T
G
--------------------------------------------------------------------------
34
SP3
43.53
14%
1
* C9 *
-
1EK1
1
HYES_MOUSE
A:
[4-544]
--------------------------RVAAFDLDGVLALPSIGPTEQLMKGKITFSQWVPLQIFSQAMAARSINRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMMCELSQHFDFLIESCQVGMIKPEPQIYNFLLDTLKAKPNEVVFLDDFGSNLKPARDMGMVTILVHNTASALRELEKVTGTQFPEAPLPVPCNPNDVSHGYVTVKPGIRLHFVEMGSGPALCLCHGFPESWFSWRYQIPALAQAGFRVLAIDMKGYGDSSSPPEIEEYAMELLCKEMVTFLDKLGIPQAVFIGHDWAGVMVWNMALFY
P
E
R
V
--
R
-
A
-
V
A
S
L
N
T
P
F
M
P
P
D
P
D
V
--
S
P
M
K
V
I
R
-----
S
I
P
V
F
----
N
Y
Q
L
Y
F
Q
E
P
G
V
A
E
A
E
L
E
K
--------------
N
------
M
---
S
R
T
F
K
S
F
-
F
R
A
S
D
E
-
T
G
F
-
I
A
V
H
K
A
T
E
I
G
G
I
L
V
--
N
T
P
E
---
D
P
N
L
S
-
K
I
T
T
E
E
E
I
E
F
Y
-
I
Q
Q
----
F
--
K
K
T
G
F
R
G
P
L
N
W
1
PsiBlast_PDB
42.71
36%
-46
- C7 -
-
2E24
-
XANLY_BACGL
A:
[548-593]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
V
H
L
A
G
N
T
A
D
G
S
D
I
G
Y
Y
--
F
P
G
G
--
A
-
T
L
--
Q
------
T
---
K
R
E
A
R
T
G
T
W
K
Q
I
N
N
-
A
P
A
-
T
P
S
T
----------------------------------------------------------
37
SP3
42.00
10%
-18
- C2 -
-
1C4X
-
?
A:
[3-283]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
T
-
V
E
I
I
E
K
R
-
F
P
S
G
--
T
--
L
A
S
H
A
L
V
-----
A
G
D
P
Q
SPAV
V
L
L
H
G
A
G
P
G
A
H
A
A
S
N
W
R
P
--------------
I
------
I
---
P
D
-
L
A
E
N
-
F
F
---
V
-
V
A
P
-----
D
--
L
I
G
---
F
G
Q
S
E
Y
P
---
E
T
Y
P
G
-
H
I
M
S
W
V
G
M
R
V
E
-
Q
I
L
----
G
--
L
M
N
H
F
-
G
I
E
K
S
25
Fugue
40.44
11%
14
- C2 -
-
1KPS
-
RAGP1_MOUSE
B:
[16-171]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
T
D
L
--
S
-
T
-
F
L
S
F
P
S
P
-
E
K
L
L
R
L
G
PK
V
S
V
L
I
V
Q
-----
Q
T
D
T
S
----
D
P
E
K
V
V
S
A
F
L
K
V
A
S
V
F
R
D
--
D
A
S
V
--
K
T
A
V
--
L
DAIDAL
M
---
K
K
A
F
S
C
S
-
S
F
N
S
N
T
-
F
L
T
-
R
L
L
I
H
M
G
L
L
K
S
E
D
K
I
K
A
I
P
S
---
L
H
G
P
L
-
M
V
L
N
H
V
V
R
Q
D
Y
-
F
P
K
----
A
--
L
A
P
L
L
L
A
F
V
T
K
36
SP3
39.94
14%
11
- C9 -
-
1EK1
1
HYES_MOUSE
A:
[226-544]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LPVPCNPNDVSHGYVTVKPGIRLHFVEMGSGPALCLCHGFPESWFSWRYQIPALAQAGFRVLAIDMKGYGDSSSPPEIEEYAMELLCKEMVTFLDKLGIPQAVFIGHDWAGVMVWNMALFY
P
E
R
V
--
R
-
A
-
V
A
S
L
N
T
P
F
M
P
P
D
P
D
V
--
S
P
M
K
V
I
R
-----
S
I
P
V
F
----
N
Y
Q
L
Y
F
Q
E
P
G
V
A
E
A
E
L
E
K
--
N
------------------
M
---
S
R
T
F
K
S
F
-
F
R
A
S
D
E
-
T
G
F
-
I
A
V
H
K
A
T
E
I
G
G
I
L
V
--
N
T
P
E
---
D
P
N
L
S
-
K
I
T
T
E
E
E
I
E
F
Y
-
I
Q
Q
----
F
--
K
K
T
G
F
R
G
P
L
N
W