@TOME V2.3
(Mar 2018)
Ref.
-
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Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
Show Ligands of Templates
Complexes Affinity Score
Main Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Complexes Tab
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : M_TH16_EuGene_00116561: (2018-03-21 )
GKNGLKDCQVSITATSEARRSFWDTQYADYNDDVEISAGRHKFVIHVEQDCGGSKVSGTIPPHHLVILSPMSGGGRRTIINSAGEVRLAAT
Atome Classification :
(20 SA)
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------..------..-----....-------.--10--.--...-....20--.......---..30-.---.-------.....-----.-40......-----------.-------------------------.50-----.------..-----.---.....---60---------.-.-...---..-.---70...------....--.80-...-------.----.-.-..-.90
(Atome)
(Ident)
(Tito)
(Num)
(QMean)
(Ligand)
(Uniprot)
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GK------NG-----LKD
C
-------
Q
--
V
S
--
I
--
T
A
T
-
S
E
A
R
R
---
S
FWDTQY---ADYN-D---
D
-------
V
E
ISA-----G-
R
H
K
F
V
I
H
V
-----------E-------------------------QD------C------GG-----S---KVSGT---IP---------P-
H
-
H
L
V
---
I
L
-S---PMSGG------GR
R
T
--
I
I--NSA-------G----
E
-
V
-
R
L
-AAT
34
Fugue
65.33
25%
104
- C6 -
-
4CI8
-
EMAL1_HUMAN
A:
[16-655]
KEPVFSAEEGYVKMFLRGRPVTMYMPKDQVDSYSLEAKVELPTKRLKLEWVYGYRGRDCRNNLYLLPTGETVYFIASVVVLYNVEEQLQRHYAGHNDDVKCLAVHPDRITIATGQVAGTSKDGKQLPPHVRIWDSVTLNTLHVIGIGFFDRAVTCIAFSKSNGGTNLCAVDDSNDHVLSVWDWQKEEKLADVKCSNEAVFAADFHPTDTNIIVTCGKSHLYFWTLEGSSLNKKQGLFEKQEKPKFVLCVTF
S
E
------
N
G
-----
D
--------------
T
--
I
--
T
G
D
-
S
S
G
N
I
---
L
V
W
G
K
G
T
---
N
R
I
S
-
Y
---
A
-------
V
Q
G
A
H
-----
E
-
G
G
I
F
A
L
C
M
-----------
L
-------------------------
R
D
--------------
G
-----
T
---
L
V
S
G
G
---
G
K
---------
D
-
R
-
K
L
I
---
S
W
-
S
---
G
N
Y
Q
K
------
L
R
K
T
--
E
I
P-
E
Q
F
-------
G
----
P
-
I
-
R
T
-
V
A
E
42
SP3
56.44
20%
11
- C5 -
-
2FNB
-
A:
[1-95]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MRGS
E
V
------
P
Q
-----
L
T
D
L
-------
S
--
F
V
D-
I
--
T
D
S
-
S
-
I
G
L
---
R
-
W
T
P
L
N
---
S
S
T
I
-
I
---
G
-------
Y
R
I
T
V
VAAGE
G
-
I
P
I
F
E
D
F
V
-----------
D
-------------------------
S
S
------
V
------
G
Y
-----
Y
---
T
V
T
G
L
---
E
P
---------
G
-
I
D
Y
D
I
---
S
V
-
I
---
T
L
I
N
G
------
G
E
---------
S
A
-------
P
----
T
-
T
-
L
T
-
Q
Q
T
35
Fugue
55.25
19%
27
- C5 -
-
3NSW
1
?
A:
[1-106]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GSHMEYCPKMLSEI
R
Q
------
E
D
-----
I
N
D
V
-------
E
TV
A
Y
--
V
--
T
V
T
-
G
K
T
A
R
---
S
Y
N
-
L
Q
Y
---
W
R
L
Y
-
D
---
V
-------
P
K
T
A
P
-----
S
-
Q
W
P
S
F
G
T
L
-----------
R
-------------------------
D
D
------
C
------
G
N
-----
I
---
Q
L
T
----------------
A
-
D
-
T
D
Y
---
V
L
-
G
---
C
K
S
G
N
------
Q
D
C
F
--
V
K
--
L
H
D
-------
G
LSQK
E
-
K
-
D
L
-
L
K
E
40
SP3
54.18
17%
39
* C5 *
-
1CVR
-
CPG2_PORGI
A:
[351-432]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
P
T
-------
E
--
M
Q
--
V
--
T
A
P
-
A
N
I
S
A
---
S
--
A
Q
T
F
EVA
C
D
Y
N
-
G
---
A
I------
A
T
L
S
D
-----
D
-
G
D
M
V
G
T
A
I
-----------
V
-------------------------
K
D
--------------
G
-----
K
AII
K
L
N
E
S
---
I
A
---------
D
-
E
-
T
N
L
---
T
L
-
T
----
V
V
G
Y
------
N
K
V
T
--
V
I
--
K
--------------
D
-
V
-
K
V
-
E
--
36
SP3
53.29
20%
10
- C6 -
-
1EW4
-
CYAY_ECOLI
A:
[1-106]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
N
D
S
-------
E
--
F
H
RL
A
--
D
Q
L
-
W
L
T
I
E
---
E
R
L
D
D
W
D
---
G
D
S
D
-
I
---
D
-------
C
E
I
N
G
-----
G
-----
V
L
T
I
-----------
T
-------------------------
F
E
------
N
------
G
S
-----
K
---
I
I
I
N
R
---
Q
E
---------
P
-
L
-
H
Q
V
---
W
L
-
A
---
T
K
Q
G
G
YHFDLK
G
D
E
W
--
I
C
--
D
R
S
-------
G
----
E
-
T
-
F
W
-
D
L
L
43
SP3
52.53
19%
43
- C5 -
-
1IFR
1
A:
[1-113]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GSHRTSGRVAVEEVDEE
G
K
FVRLRN
K
S
NEDQS
M
G
N
W
-------
Q
--
I
K
--
R
--
Q
N
G
-
D
D
P
L
L
---
T
Y
---------
R
F
P
-
P
---
K
-------
F
T
L
K
A
-----
G
-
Q
-
V
V
T
I
W
A
-----------
A
-----------------------------------------
G
-----
A
---
G
A
T
H
S
----
P
---------
P
-
T
-
D
L
V
WKA
Q
N
-
T
---
W
G
C
G
N
------
S
L
R
T
--
A
L
I-
N
S
T
-------
G
----
E
-
E
-
V
A
-
M
R
K
41
SP3
52.22
27%
38
- C2 -
-
1DFC
-
FSCN1_HUMAN
A:
[1383-1493]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RPIIVFR
G
E
------
H
G
-----
F
I
G
C
-------
R
---
K
--
V
--
T
G
T
-
L
D
A
N
R
---
S
S
Y
D
V
F
Q
---
L
E
F
N
-
D
---
G
A------
Y
N
I
K
D
-----
S
-
T
G
K
Y
-
W
T
V
-----------
G
-------------------------
S
D
-------------
S
A
-----
V
---
T
S
S
G
D
---
T
P
VDFFFEFCD
Y
-
N
-
K
V
A
---
I
K
-
V
-------
G
------
G
R
Y
L
--
K
G
--
D
H
A
-------
G
----
V
-
L
-
K
A
-
S
A
E
28
Fugue
46.69
15%
-100
- C4 -
-
2DO3
-
SPT5H_HUMAN
A:
[455-523]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
-----
S
S
G
S
-------
S
--
G
E
--
F
--
P
A
Q
-
E
L
----------
R
K
Y
---
F
K
M
G
-
D
---
H
-------
V
K
V
I
A
-----
G
-
R
F
E
---------------------------------------------------------
G
D
-----
T
---
G
L
I
V
R
---
V
E
---------
E
-
N
-
F
V
I
---
L
F
-
S
---
D
L
T
M
---------
H
E
--
L
K
--
V
L
P
-------
R
----
D
-
L
-
Q
L
-
C
S
E
31
Fugue
46.28
16%
92
- C5 -
-
2KY9
-
YDHK_BACSU
A:
[1-132]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MKVGSQVIINTS
H
M
------
K
G
-----
M
K
G
A
-------
E
--
A
T
--
V
--
T
G
A
-
Y
D
--
T
---
T
A
Y
V
V
S
Y
---
T
P
T
N
-
G
---
G
-------
Q
R
V
D
--------
H
H
K
W
V
I
Q
E
-----------
E
IKDAGDKTLQPGDQVILEASHMKGM
K
G
------
A
------
T
A
-----
E
---
I
D
S
A
E
---
K
T
---------
T
-
V
-
Y
M
V
---
D
Y
-
T
---
S
T
T
S
G
------
E
K
V
K
NH
K
W
--
V
T
E
-------
D
----
E
-
L
-
S
A
-
K
L
E
44
SP3
46.07
13%
31
* C4 *
-
1UE9
-
A:
[1-80]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
S
------
S
G
-----
S
S
---------
G
--
E
I
--
A
--
Q
V
T
-----------
S
A
Y
V
----
A
S
G
S
-
E
---
Q
-------
L
S
L
A
P
-----
G
-
Q
L
I
L
I
L
K
K
-----------
N
-------------------------
T
S
GWWQGE
L
------
Q
A
-----
R
---
G
K
K
R
Q
KGW
F
P
---------
A
-
S
-
H
V
K
---
L
L
-
G
---
P
S
S
E
R
------
A
S
G
P
-------
S
S
-------
G
--------------
45
SP3
45.26
17%
60
- C10 -
-
1F3U
-
T2FB_HUMAN
A:
[2-119]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
A
E
------
R
G
-----
E
L
D
L
TGAKQNT
G
--
V
W
--
L
--
V
K
V
-
P
K
Y
L
S
---
Q
Q
W
A
K
-----
A
S
G
R
-
G
---
E
VGK----
L
R
I
A
K
-----
T
-
Q
G
R
T
E
V
S
F
-----------
T
LNEDLANI-----------------
H
D
------
I
------
G
G
-----
K
---
P
A
S
V
S
---
A
P
---------
R
-
E
-
H
P
F
---
V
L
-
Q
---
S
V
G
G
Q
------
T
L
T
V
--
F
T
E-
S
S
S
-------
D
----
K
-
L
-
S
L
-
E
G
I
38
SP3
45.19
16%
56
- C5 -
-
2PIA
1
?
?:
[1-103]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTP
Q
E
------
D
G
-----
F
L
R
L
-------
K
--
I
A
--
S
--
K
E
K
I
A
R
D
I
W
---
S
F
E
-
L
T
D
---
P
Q
G
A
-
P
---
L
-------
P
P
F
E
A
-----
G
-
A
---
N
L
T
V
-----------
A
-------------------------
V
P
-------------
N
G
SRRTY
S
---
L
C
N
D
S
---
Q
E
---------
R
-
N
-
R
Y
V
---
I
A
-
V
KRD
S
N
G
R
G
------
G
S
I
S
--
F
I
--
D
D
T
SE-----
G
----
D
A
V
-
E
V
-
S
L
P
32
Fugue
44.40
20%
72
* C10 *
-
1F3U
-
T2FB_HUMAN
A:
[2-119]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
A
E
------
R
G
-----
E
L
D
L
-------
T
--
G
A
--
K
--
Q
N
T
-
G
V
W
L
V
KVP
K
Y
L
S
Q
Q
W
---
A
K
A
S
-
G
---
R
GEVGKLR
I
A
K
T
Q
-----
G
-
R
T
E
V
S
F
T
L
-----------
N
-------------------------
E
D
------
L
ANIHDI
G
G
-----
K
---
P
A
S
V
S
---
A
P
---------
R
-
E
-
H
P
F
---
V
L
-
Q
---
S
V
G
G
Q
------
T
L
T
V
--
F
T
--
E
S
S
SDKLSLE
G
----
I
-
V
-
V
Q
-
R
A
E
27
Fugue
42.29
20%
-14
* C2 *
-
1WCK
-
?
A:
[80-215]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GLGLPAGLYAFNS
G
G
------
I
S
-----
L
D
L
G
-------
I
--
N
D
--
P
--
V
P
F
-
N
T
V
G
S
---
Q
F
G
T
A
I
S
---
Q
L
D
A
-
D
---
T
-------
F
V
I
S
E
T----
G
-
F
Y
K
I
T
V
I
A
NTATASVLGGL
T
-------------------------
I
Q
------
V
------
N
G
-----
V
---
P
V
P
G
T
--------------
G
-
S
-
S
L
I
---
S
L
G
A
---
P
I
V
I
Q
------
A
I
T
Q
--
I
T
--
T
T
P
-------
S
----
L
-
V
-
E
V
-
I
V
T
12
HHSearch
41.23
16%
-189
- C4 -
-
2R9Q
-
?
B:
[240-296]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
D
F
W
E
P
L
F
---
A
R
G
R
-
A
---
E
-------
L
I
L
D
P
-----
D
-
E
F
Y
I
L
--------------------------------------------------------
V
-----
S
---
R
E
A
V
H
---
V
P
---------
P
-
L
-
Y
A
A
---
E
M
-
T
---
P
F
D
P
L
------
V
G
E
F
--
R
V
--
H
Y
A
-------
G
--------------
30
Fugue
39.94
21%
28
- C3 -
-
1VM0
-
Y2416_ARATH
A:
[19-116]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
K
K
------
N
---------------------
R
--
I
--
Q
V
S
-
N
T
K
K
P
---
L
F
F
Y
V
N
L
---
A
K
R
Y
M
Q
QYN
D
-------
V
E
L
S
A
L----
G
M
A
I
A
T
V
V
T
V
-----------
T
-------------------------
E
I
------
L
------
K
N
-----
N
---
G
F
A
V
E
---
K
K
---------
I
M
T
-
S
I
V
---
D
I
-
K
---
P
V
Q
K
A
------
K
I
E
I
--
T
L
--
V
K
S
-------
E
----
K
-
F
D
E
L
M
A
A
A
13
HHSearch
39.90
16%
-167
- C4 -
-
2R9Q
-
?
C:
[240-297]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
D
F
W
E
P
L
F
---
A
R
G
R
-
A
---
E
-------
L
I
L
D
P
-----
D
-
E
F
Y
I
L
--------------------------------------------------------
V
-----
S
---
R
E
A
V
H
---
V
P
---------
P
-
L
-
Y
A
A
---
E
M
-
T
---
P
F
D
P
L
------
V
G
E
F
--
R
V
--
H
Y
A
-------
G
--------------
14
HHSearch
39.01
45%
-45
- C1 -
-
2KSN
-
UBTD2_HUMAN
A:
[51-61]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
R
S
K
R
D
---
E
F
W
D
T
A
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
39
SP3
36.78
15%
98
- C5 -
-
1TIU
-
?
?:
[1-89]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LIE
V
E
------
K
P
-----
L
Y
G
V
-------
E
--
V
F
--
V
GE
T
A
H
-
F
E
I
E
L
---
S
E
P
D
V
H
G
---
Q
W
K
L
-
K
---
G
-------
Q
P
L
T
A
-----
S
-
P
D
---
C
E
I
-----------
I
-------------------------
E
D
--------------
G
-----
K
---
K
H
I
L
I
---
L
H
---------
N
----------
C
-
Q
---
L
-
G
M
T
------
G
E
V
S
--
F
Q
AA
N
A
K
-------
S
----
A
-
A
-
N
L
-
K
V
K
25
HHSearch
35.95
20%
-60
* C3 *
-
3THX
1
MSH2_HUMAN
A:
[631-709]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
R
-------
I
I
L
K
A
-----
S
-
R
H
A
C
V
E
V
Q
-------------------------------------
I
A
------
F
------
I
P
-----
N
---
D
V
Y
F
E
---
K
D
---------
K
-
Q
-
M
F
H
---
I
I
-
T
---
G
P
N
M
G
------
G
K
S
T
--
Y
I
--
R
Q
T
-------
G
----
V
-
I
-------