@TOME V2.3
(Mar 2018)
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Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
Show Ligands of Templates
Complexes Affinity Score
Main Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Complexes Tab
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : M_TH16_EuGene_00127871: (2018-03-22 )
FDCTIERRLGTQTKARARTSAKAMPEMIPAESGKHTVIAGTRVWVYGDCRTYPTHLPDGSTISGRPFQASDVEEDCIELDVHGKPKQ
Atome Classification :
(20 SA)
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------.....--..----.--.10........-----20.......--.--30.......-.40...---....--.50..-......60..------......-70.........80....-..
(Atome)
(Ident)
(Tito)
(Num)
(QMean)
(Ligand)
(Uniprot)
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FD
C
T
I
--ER----R--LGTQ
T
K
ARAR
T
-----
S
A
K
AM
P
E
MI--P--AESG
K
H
T
V
I
-
A
G
T
R
V
W
---
V
Y
GD--CRTYP-THLPDGSTIS------GRPFQA-S-DVEED
C
I
E
L
DVHGKP-KQ
61
SP3
57.21
22%
39
- C10 -
-
1OCX
-
MAA_ECOLI
A:
[1-182]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------STEKEKMIAGELYRSADETLSRDRLRARQLIHRYNHSLAEEHTLRQQILADLFGQVTEAYIEPTFRCDYGYNIFLGNNFFAN
F
D
C
V
M
--
L
D
VCPI
R
--
I
G
D
N
C
M
L
A
P
G
V
HIYTA
T
H
P
I
D
P
V
A
R
NS
G
--
A
E
L
G
K
P
V
T
I
--
G
N
N
V
W
---
I
G
G
R
--
A
V
I
N
P
G
V
T
I
G
D
N
V
V
V
A
------
S
G
A
V
V
T
-
K
-
D
V
P
D
N
V
V
V
G
G
N
P
A
R
I
I
K
K
59
SP3
55.83
18%
1
- C10 -
-
1HM9
1
GLMU_STRPN
A:
[261-468]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VSFVNPEATYIDIDVEIAPEVQIEANVILKGQTKIGAETVLTNGTYVVDSTIGAGAVITNSMIEESSVADGVTVGPYAHIRPNSSLGAQVHIGNFVEVKGSSIGENTKAGHLTYI
G
N
C
E
V
--
G
S
NV--
N
--
F
G
A
G
T
I
T
----------------
V
N
--
Y
--
D
G
K
N
K
Y
K
T
V
-
I
G
D
N
V
F
---
V
G
S
N
--
S
T
I
I
A
P
V
E
L
G
D
N
S
L
V
G
------
A
G
S
T
I
T
-
K
-
D
V
P
A
D
A
I
---
A
I
G
R
G
-
R
Q
53
Fugue
54.70
26%
-34
* C6 *
-
5G25
1
?
A:
[10-91]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Q
T
--
V
V
----
R
--
E
M
E
N
F
M
E
R
L
R
Q
-----
D
----
P
Q
G
I
--
P
--
A
L
C
N
G
A
L
A
L
-
G
G
-------
K
Q
G
T
--
C
T
A
I
P
-
C
N
V
A
Q
D
G
G
L
A
CPTAGD
V
R
A
F
Q
V
-
V
L
R
V
E
E
K
R
L
E
T
V
V
Y
-
R
P
-
L
E
1
PsiBlast_PDB
52.05
35%
-105
- C7 -
-
2MYV
-
?
A:
[42-89]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
A
N
R
N
E
E
I
T
I
-
E
E
Y
K
V
F
---
V
N
E
A
--
C
H
P
Y
P
-
V
I
L
P
D
R
S
V
L
S
------
G
D
F
T
S
A
Y
A
-
D
D
D
E
S
C
------------
49
Fugue
50.77
27%
89
- C4 -
-
4LYP
3
?
A:
[34-449]
--------------------------------------------------SEFAFVKIASDGKGFTRYGEPYLIRGANYWQGMNLGADDCSGGDRKRMELEIKQMAEMGINNLRVMASSEGPDDQPYRMRPSMMPQPGKYNEGVFVGLDYLLDTMDRYNMTAVMTLGNFWQWSGGFGQYVAWITGNQTIPYPVGDVTYDEFTQFAARFYNDSEIAPKANKLFKDHIYTVQNRRNTVNGKIYKEDPVIMSWQIANEPQEAPASWFEEISTFIKKGAPKHLVSAGLESKLDEYDFDRAHDHKNIDYTTCHCWVENWGIYDPADPDGLPHANEYMHDFLESRSKWAAQLNKPIVMEEFGMARDAWRNP
E
D
E
T
Y
--
K
Y
----
L
--
P
S
T
P
T
S
H
K
D
E
Y
-----
Y
Q
K
A
F
N
Q
I
V
--
S
--
L
A
S
N
R
S
--
F
-
S
G
S
N
F
W
---
A
Y
G
G
EG
R
S
T
Y
P
-
P
N
-
P
Y
G
M
V
W
L
------
G
-----------------
D
P
P
H
E
P
-
H
G
58
SP3
50.68
16%
13
- C10 -
-
1XAT
-
?
?:
[3-210]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NYFESPFRGKLLSEQVSNPNIRVGRYSYYSGYYHGHSFDDCARYLMPDRDDVDKLVIGSFCSIGSGAAFIMAG
N
Q
G
H
R
--
A
E
----
W
--
A
S
T
F
P
F
H
F
M
H
E
-----
E
P
A
F
A
G
A
V
N
--
G
--
Y
Q
P
A
G
D
T
L
I
--
G
H
E
V
W
---
I
G
T
E
--
A
M
F
M
P
G
V
R
V
G
H
G
A
I
I
G
------
S
R
A
L
V
T
-
G
-
D
V
E
P
Y
A
I
V
G
G
N
P
A
R
T
-
I
R
20
PsiBlast_PDB
48.10
29%
-21
- C8 -
-
2F0Z
1
NEUR2_HUMAN
A:
[301-363]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
T
H
S
W
Q
R
A
D
L
-----
G
A
Y
L
N
P
R
P
P
--
A
--
P
E
A
W
S
E
P
V
L
-
L
A
K
G
S
C
---
A
Y
S
D
--
L
Q
S
M
G
-
T
G
-
P
D
G
S
P
L
F
------
G
C
L
Y
E
A
-
N
-
D
Y
E
E
--------------
55
SP3
47.98
14%
-23
- C10 -
-
1J2Z
2
LPXA_HELPY
A:
[2-260]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SKIAKTAIISPKAEINKGVEIGEFCVIGDGVKLDEGVKLHNNVTLQGHTFVGKNTEIFPFAVLGTQPQDLKYKGEYSELIIGEDNLIREFCMINPGTEGGI
K
K
T
L
I
--
G
D
----
K
NL
L
M
A
Y
V
H
V
A
H
D
C
-----
V
I
G
S
H
C
I
L
A
--
N
G-
V
T
L
A
G
H
I
E
I
--
G
D
Y
V
N
---
I
G
G
L
--
T
A
I
H
Q
F
V
R
I
A
K
G
C
M
I
A
------
G
K
S
A
L
G
-
K
-
D
V
P
P
Y
C
T
V
E
G
N
R
A
F
I
-
R
G
62
SP3
47.75
19%
77
- C10 -
-
1HM9
2
GLMU_STRPN
A:
[11-468]
SNFAIILAAGKGTRMKSDLPKVLHKVAGISMLEHVFRSVGAIQPEKTVTVVGHKAELVEEVLAGQTEFVTQSEQLGTGHAVMMTEPILEGLSGHTLVIAGDTPLITGESLKNLIDFHINHKNVATILTAETDNPFGYGRIVRNDNAEVLRIVEQKDATDFEKQIKEINTGTYVFDNERLFEALKNINTNNAQGEYYITDVIGIFRETGEKVGAYTLKDFDESLGVNDRVALATAESVMRRRINHKHMVNGVSFVNPEATYIDIDVEIAPEVQIEANVILKGQTKIGAETVLTNGTYVVDSTIGAGAVITNSMIEESSVADGVTVGPYAHIRPNSSLGAQVHIGNFVEVKGSSIGENTKAGHLTYI
G
N
C
E
V
--
G
S
----
N
VN
F
G
A
G
T
I
T
V
N
Y
D
-----
G
K
N
K
Y
K
T
V
I
--
G
DN
V
F
V
G
S
N
S
T
I
I
A
P
V
E
L
G
DNS
L
V
G
A
--
G
S
T
I
T
-
K
D
V
P
A
D
A
I
A
I
------
G
R
G
R
Q
I
-
N
--
K
D
E
Y
A
T
R
L
P
H
H
P
K
N
-
Q
-
17
PsiBlast_PDB
47.73
29%
-22
* C8 *
-
1SNT
-
NEUR2_HUMAN
A:
[299-361]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
T
H
S
W
Q
R
A
D
L
-----
G
A
Y
L
N
P
R
P
P
--
A
--
P
E
A
W
S
E
P
V
L
-
L
A
K
G
S
C
---
A
Y
S
D
--
L
Q
S
M
G
-
T
G
-
P
D
G
S
P
L
F
------
G
C
L
Y
E
A
-
N
-
D
Y
E
E
--------------
8
PsiBlast_PDB
47.56
37%
-231
- C5 -
-
3JTR
-
?
B:
[287-315]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
D
L
T
L
--
E
R
----
F
--
M
A
L
Q
L
S
H
R
A
V
M
-----
A
D
R
T
L
P
D
L
I
--
P
--
A
-------------------------------------------------------------------------
18
PsiBlast_PDB
47.47
29%
-22
- C8 -
-
1SO7
-
NEUR2_HUMAN
A:
[301-363]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
T
H
S
W
Q
R
A
D
L
-----
G
A
Y
L
N
P
R
P
P
--
A
--
P
E
A
W
S
E
P
V
L
-
L
A
K
G
S
C
---
A
Y
S
D
--
L
Q
S
M
G
-
T
G
-
P
D
G
S
P
L
F
------
G
C
L
Y
E
A
-
N
-
D
Y
E
E
--------------
24
HHSearch
46.91
35%
-145
- C7 -
-
2MYV
-
?
A:
[46-79]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
E
E
I
T
I
-
E
E
Y
K
V
F
---
V
N
E
A
--
C
H
P
Y
P
-
V
I
L
P
D
R
S
V
L
S
------
G
D
F
T
-----------------------
57
SP3
46.81
17%
53
- C10 -
-
1KK6
-
VATD_ENTFC
A:
[1-207]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MGPNPMKMYPIEGNKSVQFIKPILEKLENVEVGEYSYYDSKNGETFDKQILYHYPILNDKLKIGKFCSIGPGVTIIMNG
A
N
H
R
M
--
D
-----
G
--
S
T
Y
P
F
N
L
F
G
N
G
-----
W
E
K
H
M
P
K
L
D
--
Q
--
L
P
I
K
G
D
T
I
I
--
G
N
D
V
W
---
I
G
K
D
--
V
V
I
M
P
G
V
K
I
G
D
G
A
I
V
A
------
A
N
S
V
V
V
-
K
-
D
I
A
P
Y
M
L
A
G
G
N
P
A
N
E
I
K
Q
19
PsiBlast_PDB
46.59
29%
-24
- C8 -
-
1VCU
2
NEUR2_HUMAN
A:
[301-363]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
T
H
S
W
Q
R
A
D
L
-----
G
A
Y
L
N
P
R
P
P
--
A
--
P
E
A
W
S
E
P
V
L
-
L
A
K
G
S
C
---
A
Y
S
D
--
L
Q
S
M
G
-
T
G
-
P
D
G
S
P
L
F
------
G
C
L
Y
E
A
-
N
-
D
Y
E
E
--------------
6
PsiBlast_PDB
46.47
37%
-211
- C5 -
-
2AE3
-
?
B:
[287-315]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
D
L
T
L
--
E
R
----
F
--
M
A
L
Q
L
S
H
R
A
V
M
-----
A
D
R
T
L
P
D
L
I
--
P
--
A
-------------------------------------------------------------------------
56
SP3
46.35
13%
-52
* C10 *
-
1LXA
-
?
?:
[1-262]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MIDKSAFVHPTAIVEEGASIGANAHIGPFCIVGPHVEIGEGTVLKSHVVVNGHTKIGRDNEIYQFASIGEVNQDLKYAGEPTRVEIGDRNRIRESVTIHRGTVQGGGLTKVG
S
D
N
L
L
MI
N
A
----
H
--
I
A
H
D
C
T
V
G
N
R
C
-----
I
L
A
N
N
---------
A
T
L
A
G
H
V
S
V
--
D
D
F
A
I
---
I
G
G
M
--
T
A
V
H
Q
F
C
I
I
G
A
H
V
M
V
G
------
G
C
S
G
V
A
-
Q
-
D
V
P
P
Y
V
I
A
Q
G
N
H
A
T
P
-
F
G
4
PsiBlast_PDB
46.34
37%
-219
- C5 -
-
4E57
-
?
A:
[452-480]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
D
L
T
L
--
E
R
----
F
--
M
A
L
Q
L
S
H
R
A
V
M
-----
A
D
R
T
L
P
D
L
I
--
P
--
A
-------------------------------------------------------------------------
7
PsiBlast_PDB
45.95
37%
-195
- C5 -
-
2AE4
-
?
B:
[287-315]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
D
L
T
L
--
E
R
----
F
--
M
A
L
Q
L
S
H
R
A
V
M
-----
A
D
R
T
L
P
D
L
I
--
P
--
A
-------------------------------------------------------------------------
2
PsiBlast_PDB
45.63
37%
-204
- C5 -
-
4E55
-
?
A:
[448-476]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
D
L
T
L
--
E
R
----
F
--
M
A
L
Q
L
S
H
R
A
V
M
-----
A
D
R
T
L
P
D
L
I
--
P
--
A
-------------------------------------------------------------------------