@TOME V2.3
(Mar 2018)
Ref.
-
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Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
Show Ligands of Templates
Complexes Affinity Score
Main Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Complexes Tab
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : spr0373: (2017-12-21 )
MAQSLNKTVLLSTTGTSYLSIAGKVGKFLVGDQALEFYPDVNVEQFIQIPWSHINQIGANVTGRKISRHFEVFTDKGKFLFASKDSGAILKIAREKLGNDKVVKLPTLIQTISQKFKNLFAKK
Atome Classification :
(20 SA)
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------.........10........20......-----..30---........40....-------..-..50....-----....60-.-..---..-...70...---.---.--...80---...---...-...90-.....--....100.......110........120.-------------------------------------------------------------------
(Atome)
(Ident)
(Tito)
(Num)
(QMean)
(Ligand)
(Uniprot)
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MAQSLN
K
T
V
L
L
STTGT
S
Y
L
S
I
A
G
KV
G
K
-----
F
L
VG---D
Q
A
L
EFYPDV
N
V
E
Q
-------
F
I
-
Q
I
P
W
S
H
I
N
-----
Q
IGANV-T-
G
R
---
K
I
-
S
R
H
F
E
V
FT---D---K--G
K
F
L
----
F
AS---KDS-
G
A
I
L
--
K
I
A
R
E
--KLGND
K
V
VK
L
P
T
L
I
Q
T
-
I
S
Q
K
F
K
N
L
FAKK-------------------------------------------------------------------
29
HHSearch
63.69
16%
-210
- C3 -
-
3PZD
-
A:
[435-502]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
L
W
-----
L
G
V
S
---
A
D
A
V
S
V
Y
K
R
G
E
G
R
P
-------
L
E
-
V
F
Q
Y
E
H
I
L
-----
S
F
G
A
P
L
---
A
-------
N
T
-
Y
K
I
V
V
---
D
---
E
--
R
E
L
L
----
F
E
T
---
S
E
V
-
V
D
V
A
--
K
L
M
K
A
--
Y
I
S
---------------------------------------------------------------------------------------------
1
PsiBlast_PDB
61.21
34%
0
- C- -
-
3KG6
-
?
A:
[43-116]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
V
L
F
P
S
T
G
--
Y
L
E
I
A
A
S
A
G
K
-----
S
L
F
T
---
S
Q
E
Q
V
V
V
S
D
V
D
I
L
Q
-------
S
L
-
V
I
P
E
T
E
I
K
-----
T
V
Q
T
V
V
-
S
F
A
E
---
N
N
-
S
Y
K
F
E
I
F
S
-----------------------------------------------------------------------------------------------------------------------------------------
16
Fugue
61.00
27%
27
- C2 -
-
5EFV
-
?
A:
[11-648]
GSMSNKLITDLSRVFD
Y
R
Y
V
D
E
N
E
Y
N
F
K
L
I
S
D
M
L
T
D
F
N
F
S
L
E
Y
H
R
NKEVFAHDGEQ
I
K
Y
E
H
LN
V
T
S
N
V
S
D
F
L
T
Y
L
N
G
R
F
S
N
M
V
L
GHNGD
G
I
N
E
V
K
D
A
R
VDNTGYGHKT
L
Q
D
R
L
Y
H
D
Y
S
T
L
D
V
F
T
K
K
V
E
K
A
V
D
E
H
Y
K
E
Y
R
A
T
E
Y
R
F
E
PK
E
Q
E
P
E
F
I
T
D
L
S
P
YTNAVMQ
S
F
W
V
D
PRTK
I
I
Y
M
T
Q
A
R
PGN
H
Y
M
L
S
R
L
K
PNGQFI
D
R
L
L
VKNGGHGT
H
N
A
Y
R
Y
I
DG
E
L
W
I
Y
S
A
V
L
D
SNK
N
N
K
F
V
R
F
Q
Y
R
T
G
EITYGNE
M
Q
D
V
MPNIFND
R
Y
T
S
A
I
Y
N
PVEN
L
M
I
F
R
R
E
Y
K
P
T
E
R
Q
L
KNSL
N
F
V
E
V
R
S
A
D
D
I
D
KIDKVL
Y
Q
M
D
I
P
M
EYTSDTQPMQ
G
I
T
Y
D
AG
I
L
Y
W
Y
T
G
DSNTA
N
P
N
Y
L
Q
G
F
DIKTKELL
F
K
R
R
I
D
I
G
GVNF
Q
E
A
E
G
L
D
M
Y
Y
D
LETG
R
K
A
L
L
I
G
V
T
I
G
P
GNN
R
H
H
S
I
Y
S
IGQRG
V
N
Q
F
L
K
N
IAPQVS
M
T
D
S
G
G
R
V
K
P
L
P
I
Q
N
P
A
Y
L
S
D
I
T
E
V
G
H
-----
Y
Y
I
Y
---
T
Q
D
T
Q
N
A
L
D
F
P
L
P
K
AFRD
A
G
W
F
L
-
D
V
L
P
G
H
Y
N
G
A
L
R
Q
V
L
T
R
N
S
-
T
-
G
R
NM
L
K
F
-
E
R
V
I
D
I
F
N
---
K
---
K
NN
G
A
W
N
----
F
C
P
---
Q
N
A
-
G
Y
W
E
--
H
I
P
K
S
IT
K
L
S
D
L
K
I
V
G
L
D
F
Y
I
T
T
E
E
S
N
R
F
T
D
F
P
K
D
F
KGI
A
G
W
I
L
E
V
K
S
N
T
PG
N
T
T
Q
V
L
R
R
NNFP
S
A
H
Q
F
L
V
R
N
F
G
TGGV
G
K
W
S
L
F
E
G
K
V
V
E------------
9
PsiBlast_PDB
57.72
32%
0
- C- -
-
5TZ7
-
?
A:
[43-119]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Q
V
F
N
K
-
V
L
F
P
A
T
G
--
Y
L
E
I
A
A
A
V
G
K
-----
N
L
L
T
---
T
G
E
Q
V
V
V
S
D
V
T
I
V
R
-------
G
L
-
V
I
P
E
T
D
I
K
-----
T
V
Q
T
V
I
S
T
-
L
E
---
N
N
-
S
Y
K
L
E
I
F
S
-----------------------------------------------------------------------------------------------------------------------------------------
8
PsiBlast_PDB
57.72
32%
0
- C- -
-
5TZ5
-
?
A:
[43-117]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Q
V
F
N
K
-
V
L
F
P
A
T
G
--
Y
L
E
I
A
A
A
V
G
K
-----
N
L
L
T
---
T
G
E
Q
V
V
V
S
D
V
T
I
V
R
-------
G
L
-
V
I
P
E
T
D
I
K
-----
T
V
Q
T
V
I
S
T
-
L
E
---
N
N
-
S
Y
K
L
E
I
F
S
-----------------------------------------------------------------------------------------------------------------------------------------
7
PsiBlast_PDB
57.72
32%
0
- C- -
-
3KG9
-
?
A:
[997-1071]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Q
V
F
N
K
-
V
L
F
P
A
T
G
--
Y
L
E
I
A
A
A
V
G
K
-----
N
L
L
T
---
T
G
E
Q
V
V
V
S
D
V
T
I
V
R
-------
G
L
-
V
I
P
E
T
D
I
K
-----
T
V
Q
T
V
I
S
T
-
L
E
---
N
N
-
S
Y
K
L
E
I
F
S
-----------------------------------------------------------------------------------------------------------------------------------------
32
HHSearch
55.42
16%
-193
- C3 -
-
3AU4
-
MYO10_HUMAN
A:
[1972-2039]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
W
-----
L
G
V
S
---
A
D
A
V
S
V
Y
K
R
G
E
G
R
P
-------
L
E
-
V
F
Q
Y
E
H
I
L
-----
S
F
G
A
P
L
---------
A
-
N
T
-
Y
K
I
V
V
---
D
---
E
--
R
E
L
L
----
F
E
T
---
S
E
V
-
V
D
V
A
--
K
L
M
K
A
--
Y
I
S
M
--------------------------------------------------------------------------------------------
26
HHSearch
54.64
9%
-100
- C3 -
-
5EJY
1
A:
[426-496]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
N
F
V
-----
L
A
L
N
---
V
N
G
I
N
I
Y
D
P
A
T
S
K
M
-------
L
E
-
S
V
K
Y
S
N
Q
S
-----
Q
Q
N
L
K
S
-
D
-
D
-------
K
S
-
V
S
I
I
L
---
E
N--
K
--
S
T
L
Q
----
A
F
T
---
G
D
V
-
Q
K
L
V
--
S
L
I
K
E
--
Y
S
L
---------------------------------------------------------------------------------------------
33
HHSearch
53.98
13%
-84
- C3 -
-
3PVL
4
A:
[496-572]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
I
-----
V
A
V
N
---
W
T
G
V
Y
F
V
D
E
Q
-
E
Q
V
-------
L
L
-
E
L
S
F
P
E
I
M
-----
A
V
S
S
S
R
-
G
-
T
K
---
M
M
A
P
S
-
F
T
L
A
T
---
I
K--
G
--
D
E
Y
T
----
F
T
S
---
S
N
A
-
E
D
I
R
--
D
L
V
V
T
--
F
L
E
---------------------------------------------------------------------------------------------
21
HHSearch
52.78
14%
-103
* C3 *
-
4TYZ
-
?
B:
[33-104]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
K
Q
G
Y
-----
L
F
I
T
---
P
H
W
L
C
F
Q
S
T
L
A
-
A
A
-------
H
F
-
S
I
E
Y
D
E
I
K
-----
D
I
I
K
S
K
-
S
-
V
K
---
M
F
-
E
N
A
I
E
V
K
T
---
H
L--
N
--
D
T
I
F
----
L
T
N
---
F
L
Q
R
D
Q
A
Y
--
S
A
L
M
---------------------------------------------------------------------------------------------------
38
HHSearch
52.58
6%
-175
- C3 -
-
5XBF
1
A:
[427-497]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
L
-----
I
A
I
N
---
R
H
G
V
L
L
I
H
P
K
T
K
D
L
-------
L
T
-
T
Y
P
F
T
K
I
S
-----
S
W
S
S
G
S
-----------
T
Y
-
F
H
M
A
L
---
G
S--
G
--
S
R
L
L
----
C
E
T
---
S
L
G
-
Y
K
M
D
--
D
L
L
T
S
--
Y
V
Q
Q
--------------------------------------------------------------------------------------------
35
HHSearch
51.13
6%
-233
- C3 -
-
5MV7
-
?
A:
[433-503]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
L
-----
I
A
I
N
---
R
H
G
V
L
L
I
H
P
K
T
K
D
L
-------
L
T
-
T
Y
P
F
T
K
I
S
-----
S
W
S
S
G
S
---
T
--------
Y
-
F
H
M
A
L
----------
S
R
L
L
----
C
E
T
---
S
L
G
-
Y
K
M
D
--
D
L
L
T
S
--
Y
V
Q
Q
--------------------------------------------------------------------------------------------
36
HHSearch
50.78
13%
-41
- C3 -
-
4HDO
-
A:
[243-313]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
P
V
Y
-----
V
G
V
N
---
I
K
G
L
H
L
L
N
M
E
T
-
K
A
-------
L
L
I
S
L
K
Y
G
C
F
M
-------
W
Q
L
--
G
-
D
----
T
D
-
T
C
-
F
Q
I
H
S
---
M
EN-
K
--
M
S
F
I
----
V
H
T
---
K
Q
A
-
G
L
V
V
--
K
L
L
M
K
--
L
N
G
---------------------------------------------------------------------------------------------
34
HHSearch
50.77
11%
-125
- C3 -
-
5EJS
-
MYOI_DICDI
A:
[423-492]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
W
-----
L
A
I
N
---
K
K
G
V
S
I
F
D
P
H
T
K
E
S
-------
K
N
-
F
W
T
F
Q
S
I
S
-----
N
V
A
F
T
D
-----------
D
T
-
F
C
I
M
T
G
NL
M
K--
P
--
I
K
Q
T
----
F
T
T
---
D
E
H
-
S
S
I
A
--
S
V
Y
Q
F
--
Y
S
S
---------------------------------------------------------------------------------------------
40
HHSearch
49.92
22%
5
- C3 -
-
1H4R
-
MERL_HUMAN
A:
[232-305]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
E
L
L
-----
L
G
V
D
---
A
L
G
L
H
I
Y
D
P
E
N
R
L
T
P------
K
I
-
S
F
P
W
N
E
I
R
-----
N
I
S
Y
S
----
D
-------
K
E
-
F
T
I
K
P
---
L
DKK
I
--
D
V
F
K
----
F
N
S
S
K
L
R
V
N
-
K
L
I
L
--
Q
L
C
I
G
--
N
H
----------------------------------------------------------------------------------------------
37
HHSearch
49.86
13%
-47
- C3 -
-
4HDQ
1
A:
[243-313]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
P
V
Y
-----
V
G
V
N
---
I
K
G
L
H
L
L
N
M
E
T
-
K
A
-------
L
L
I
S
L
K
Y
G
C
F
M
-------
W
Q
L
--
G
-
D
----
T
D
-
T
C
-
F
Q
I
H
S
---
M
EN-
K
--
M
S
F
I
----
V
H
T
---
K
Q
A
-
G
L
V
V
--
K
L
L
M
K
--
L
N
G
---------------------------------------------------------------------------------------------
31
HHSearch
49.70
11%
-137
- C3 -
-
5EJR
4
A:
[437-506]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
W
-----
L
A
I
N
---
K
K
G
V
S
I
F
D
P
H
T
K
E
S
-------
K
N
-
F
W
T
F
Q
S
I
S
-----
N
V
A
F
T
D
-----------
D
T
-
F
C
I
M
T
----K--
P
--
I
K
Q
T
----
F
T
T
---
D
E
H
-
S
S
I
A
--
S
V
Y
Q
F
--
Y
S
S
---------------------------------------------------------------------------------------------
5
PsiBlast_PDB
49.04
24%
7
- C3 -
-
4BNQ
-
IXTPA_STAAN
A:
[57-166]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
A
K
A
L
N
K
T
V
I
A
D
D
S
G
L
E
V
F
A
L
N
G
E
P
G
I
-----
Y
S
A
R
---
Y
A
G
E
N
K
S
D
E
A
N
I
E
K
-------
L
--------
L
N
-----
K
L
G
-
N
T
-
T
-
D
R
---
R
--
A
Q
F
V
C
V
I
S
---
M
---
S
--
G
P
D
M
E
T
K
V
F
K
G
---
T
V
S
-
G
E
I
A
DG
K
Y
G
E
N
--
G
F
G
Y
D
P
I
F
Y
V
P
K
L
D
K
T
-
M
A
Q
----------------------------------------------------------------------------
17
Fugue
48.59
25%
2
- C3 -
-
5TPI
-
?
A:
[7-211]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Q
G
L
F
S
L
G
S
L
E
S
T
A
A
VRI
P
S
T
L
A
H
F
N
Q
R
Y
P
K
I
H
L
A
L
S
T
G
P
S
G
T
M
I
D
G
V
L
E
G
ALS
A
A
F
V
D
G
PLV
H
P
G
L
E
G
L
P
V
F
P
E
E
M
-------
M
I
-
V
A
P
Y
G
H
-----------------
A
---
P
I
-
T
R
A
S
E
V
---------
N
--
G
A
N
V
----
Y
A
F
---
R
A
N
-
C
S
Y
R
--
R
H
F
E
S
--
W
F
H
A
D
R
A
T
--
P
G
R
I
H
E
-
M
-
E
S
Y
H
G
M
L
A
C
V
I
A
GA
G
L
A
L
I
P
R
S
M
L
E
S
MPGHQQ
V
S
A
W
P
L
A
EEWR
W
L
T
T
W
L
V
W
RRGAKT
R
Q
L
E
A
F
I
A
L
L
N
E
D
RQTVVSP
39
HHSearch
48.38
8%
-159
- C3 -
-
5MV9
-
?
A:
[442-511]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
L
-----
I
A
I
N
---
K
Y
G
V
S
L
I
D
P
K
T
K
D
I
-------
L
T
-
T
H
P
F
T
K
I
S
-----
N
W
S
S
G
N
-----------
T
Y
-
F
H
I
T
I
---
G
N-----
S
K
L
L
----
C
E
T
---
S
L
G
-
Y
K
M
D
--
D
L
L
T
S
--
Y
I
S
---------------------------------------------------------------------------------------------