@TOME V2.3
(Mar 2018)

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3D Common Core:

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Modeller Result :

Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : spr0557: (2017-12-24 )
MAMIEVEHLQKNFVKTVKEPGLKGALRSFIHPEKQTFEAVKDLTFEVPKGQILGFIGANGAGKSTTIKMLTGILKPTSGFCRINGKIPQDNRQDYVKDIGVVFGQRTQLWWDLALQETYTVLKEIYDVPNSLFHKRMDFLNEVLDLKDFIKDPVRTLSLGQRMRADIAASLLHNPKVLFLDEPTIGLDVSVKDNIRRAITQINQEEETTILLTTHDLSDIEQLCDRIFMIDKGQEIFDGTVSQLKETFGKMKTLSFELLPGQSHLVSHYEGLSDMTIDRQGNSLNIEFDSSRYQSADIIKQTLSDFEIRDLKMVDTDIEDIIRRFYRKEL

Atome Classification :

(20 SA) .........10........20........30........40........50........60........70........80.....----...90--.----........100..-.....110.......120......--.130.......140.......150.......160.......170.......180.......190.......200.....--..210.......220.......230.......240.......250.......260.......-270.......280.......290.......300.......310.......320.......330------------------------
(Atome) (Ident) (Tito) (Num) (QMean) (Ligand) (Uniprot) MAMIEVEHLQKNFVKTVKEPGLKGALRSFIHPEKQTFEAVKDLTFEVPKGQILGFIGANGAGKSTTIKMLTGILKPTSGFCRINGK----IPQD---N----RQDYVKDIGVVFG-QRTQLWWDLALQETYTVLKEIYDV--PNSLFHKRMDFLNEVLDLKDFIKDPVRTLSLGQRMRADIAASLLHNPKVLFLDEPTIGLDVSVKDNIRRAITQINQEEE--TTILLTTHDLSDIEQLCDRIFMIDKGQEIFDGTVSQLKETFGKMKTLSFELLPGQSHLVSHY-EGLSDMTIDRQGNSLNIEFDSSRYQSADIIKQTLSDFEIRDLKMVDTDIEDIIRRFYRKEL--------------------------
38 HHSearch 84.6135%-107 - C1 - - 4YER ? A:[3-306] EDIIVVENLVKKFGD---------------------FEAVKGVSFSVKKGEIFAFLGPNGAGKTTTIHMLTTLLKPTSGKAWVAGH----DVLK---E----PREVRRKIGIVF--QDQSLDRELTAYENMYIHGKIYGY--GGEKLKKRILELLEFVELLEFKDKPVKTFSGGMARRLEIARSLIHEPEVLFLDEPTIGLDPHTRAHMWEYISKMKKEHN--MTIFLTTHYMDEAEQLADRVAIIDHGKIIALGTPTELKRMVGKEIIY-VR----------DF-IESC-R--KLPDGRLELNVED-----------------IEEITYHKPTLNDVFLHLTGRE---------------------------
1 PsiBlast_PDB 79.6542%-118 - C1 - - 4YER ? A:[18-258] ------------------------------------FEAVKGVSFSVKKGEIFAFLGPNGAGKTTTIHMLTTLLKPTSGKAWVAGH----DVLK---E----PREVRRKIGIVF--QDQSLDRELTAYENMYIHGKIYGY--GGEKLKKRILELLEFVELLEFKDKPVKTFSGGMARRLEIARSLIHEPEVLFLDEPTIGLDPHTRAHMWEYISKMKKEHN--MTIFLTTHYMDEAEQLADRVAIIDHGKIIALGTPTELKRMVGK-----------------------------------------------------------------------------------------------------------
2 PsiBlast_PDB 67.0234%-123 - C1 - - 1VPL - ? A:[29-237] -------------------------------------EILKGISFEIEEGEIFGLIGPNGAGKTTTLRIISTLIKPSSGIVTVFGK----NVVE---E----PHEVRKLIS-YLP-EEAGAYRNMQGIEYLRFVAGFYAS--SSSEIEEMVERATEIAGLGEKIKDRVSTYSKGMVRKLLIARALMVNPRLAILDEPTSGLDVLNAREVRKILKQASQ-EG--LTILVSSHNMLEVEFLCDRIALIHNGTIVETGTVEELKERY-------------------------------------------------------------------------------------------------------------
29 Fugue 65.7126% -29 - C1 - - 3TUZ METN_ECOLI H:[23-362] -HMIKLSNITKVFHQ-----------------GTRTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTEGSVLVDGQELTTLSES---E----LTKARRQIGMIF--QHFNLLSSRTVFGNVALPLELDNT--PKDEVKRRVTELLSLVGLGDKHDSYPSNLSGGQKQRVAIARALASNPKVLLCDQATSALDPATTRSILELLKDINRRLG--LTILLITHEMDVVKRICDCVAVISNGELIEQDTVSEVFSHPKTPLAQKFIQSTLHLDIPEDYQERLQAEPFTDCVPMLRLEFTGQSVDAP-LLSETARRFNV-NNNIISAQMDYAGGVKFGIMLTEMHGTQQDTQAAIAWLQEHHVKVEV
55 HHSearch 62.6031% -40 - C1 - - 3TUI METN_ECOLI C:[23-254] -HMIKLSNITKVFHQGT-----------------RTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTEGSVLVDGQ----ELTT---LSESELTKARRQIGMIF--QHFNLLSSRTVFGNVALPLELDNT--PKDEVKRRVTELLSLVGLGDKHDSYPSNLSGGQKQRVAIARALASNPKVLLCDQATSALDPATTRSILELLKDINRRLG--LTILLITHEMDVVKRICDCVAVISNGELIEQDTVSEVFSH--------------------------------------------------------------------------------------------------------------
11 PsiBlast_PDB 61.2628% -54 - C1 - - 4HLU ECFA2_THEMA A:[23-231] -------------------------------------KALENVSLVINEGECLLVAGNTGSGKSTLLQIVAGLIEPTSGDVLYDGE------RK---K----GYEIRRNIGIAFQYPEDQFFAERVFDEVAFAVKNFYPDRDPVPLVKKAMEFVG--LDFDSFKDRVPFFLSGGEKRRVAIASVIVHEPDILILDEPLVGLDREGKTDLLRIVEKWKTLGK--TVILI-SHDIETVINHVDRVVVLEKGKKVFDGTRMEFLEKY-------------------------------------------------------------------------------------------------------------
44 HHSearch 60.3429%-108 - C1 - - 2YYZ ? A:[2-225] -PSIRVVNLKKYFGK---------------------VKAVDGVSFEVKDGEFVALLGPSGCGKTTTLLMLAGIYKPTSGEIYFDDV----LVND---I-----PPKYREVGMV-F-QNYALYPHMTVFENIAFPLRARRI--SKDEVEKRVVEIARKLLIDNLLDRKPTQLSGGQQQRVALARALVKQPKVLLFDEPLSNLDANLRMIMRAEIKHLQQELG--ITSVYVTHDQAEAMTMASRIAVFNQGKLVQYGTPDEVYDSP-------------------------------------------------------------------------------------------------------------
13 PsiBlast_PDB 59.5828% -47 - C- - - 2YZ2 - ECFA2_THEMA A:[21-229] -------------------------------------KALENVSLVINEGECLLVAGNTGSGKSTLLQIVAGLIEPTSGDVLYDGE------RK---K----GYEIRRNIGIAFQYPEDQFFAERVFDEVAFAVKNFYPDRDPVPLVKKAMEFVG--LDFDSFKDRVPFFLSGGEKRRVAIASVIVHEPDILILDEPLVGLDREGKTDLLRIVEKWKTLGK--TVILI-SHDIETVINHVDRVVVLEKGKKVFDGTRMEFLEKY-------------------------------------------------------------------------------------------------------------
15 PsiBlast_PDB 59.1929%-114 - C1 - - 2YYZ ? A:[17-233] -------------------------------------KAVDGVSFEVKDGEFVALLGPSGCGKTTTLLMLAGIYKPTSGEIYFDDV----LVND---I----PPKY-REVGMVF--QNYALYPHMTVFENIAFPLRARRI--SKDEVEKRVVEIARKLLIDNLLDRKPTQLSGGQQQRVALARALVKQPKVLLFDEPLSNLDANLRMIMRAEIKHLQQELG--ITSVYVTHDQAEAMTMASRIAVFNQGKLVQYGTPDEVYDSPKNMFVASF-----------------------------------------------------------------------------------------------------
5 PsiBlast_PDB 58.9331% -21 - C1 - - 3TUI METN_ECOLI C:[35-257] ------------------------------HQGTRTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTEGSVLVDGQELTTLSES---E----LTKARRQIGMIF--QHFNLLSSRTVFGNVALPLELDNT--PKDEVKRRVTELLSLVGLGDKHDSYPSNLSGGQKQRVAIARALASNPKVLLCDQATSALDPATTRSILELLKDINRRLG--LTILLITHEMDVVKRICDCVAVISNGELIEQDTVS---EVFSHPKT--------------------------------------------------------------------------------------------------------
41 HHSearch 58.5927%-117 - C1 - - 3RLF MALK_ECOLI A:[2-224] -ASVQLQNVTKAWGE---------------------VVVSKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLETITSGDLFIGEK----RMND---T-----PPAERGVGMVF--QSYALYPHLSVAENMSFGLKLAGA--KKEVINQRVNQVAEVLQLAHLLDRKPKALSGGQRQRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLG--RTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYHY--------------------------------------------------------------------------------------------------------------
14 PsiBlast_PDB 58.4628%-101 - C1 - - 4RVC - ? A:[19-226] ---------------------------------------LEDVTFVVDRGEMVALIGLNGAGKSTTIKHIIGLMEPRRGAISINGY----RLAD---G----PETYRRQFAYI-P-ETPVLYEELTLEEHLRLAAMAYGL--SEAEYERRLPPLLREFRLERRLSSFPAHFSKGMKQKVMIVCAFLLEPPLYIIDEPFLGLDPLA---IHALLERMNEQKAKGAGILLSTHILATAERYCDSFVILHNGRVKAKGTLDDIRRQFG------------------------------------------------------------------------------------------------------------
24 PsiBlast_CBE 58.3431% -26 - C1 - - 3TUI METN_ECOLI H:[35-257] ------------------------------HQGTRTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTEGSVLVDGQELTTLSES---E----LTKARRQIGMIF--QHFNLLSSRTVFGNVALPLELDNT--PKDEVKRRVTELLSLVGLGDKHDSYPSNLSGGQKQRVAIARALASNPKVLLCDQATSALDPATTRSILELLKDINRRLG--LTILLITHEMDVVKRICDCVAVISNGELIEQDTVS---EVFSHPKT--------------------------------------------------------------------------------------------------------
54 HHSearch 57.5826% -53 - C1 - - 5X40 CBIO_RHOCB A:[15-245] -PILAAEALTYAFPG--------------------GVKALDDLSLAVPKGESLAILGPNGAGKSTLLLHLNGTLRPQSGRVLLGGT----ATGHSRKD----LTGWRRRVGLVLQ-DADDQLFATTVFEDVSFGPLNLGL--SEAEARARVEEALAALSISDLRDRPTHMLSGGQKRRVAIAGAVAMRPEVLLLDQPTAGLDLAGTEQLLTLLRGLRA-AG--MTLVFSTHDVELAAALADRVALFRTGRVLAEGAAEAVLSDRAT-----------------------------------------------------------------------------------------------------------
26 PsiBlast_CBE 57.3431% -23 - C1 - - 3TUI METN_ECOLI D:[35-257] ------------------------------HQGTRTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTEGSVLVDGQELTTLSES---E----LTKARRQIGMIF--QHFNLLSSRTVFGNVALPLELDNT--PKDEVKRRVTELLSLVGLGDKHDSYPSNLSGGQKQRVAIARALASNPKVLLCDQATSALDPATTRSILELLKDINRRLG--LTILLITHEMDVVKRICDCVAVISNGELIEQDTVS---EVFSHPKT--------------------------------------------------------------------------------------------------------
48 HHSearch 56.9126% -45 - C1 - - 5X3X - CBIO_RHOCB B:[2-233] TPILAAEALTYAFPG--------------------GVKALDDLSLAVPKGESLAILGPNGAGKSTLLLHLNGTLRPQSGRVLLGGT----ATGHSRKD----LTGWRRRVGLVLQ-DADDQLFATTVFEDVSFGPLNLGL--SEAEARARVEEALAALSISDLRDRPTHMLSGGQKRRVAIAGAVAMRPEVLLLDEPTAGLDLAGTEQLLTLLRGLRA-AG--MTLVFSTHDVELAAALADRVALFRTGRVLAEGAAEAVLSDRAT-----------------------------------------------------------------------------------------------------------
53 HHSearch 56.7832% -33 - C1 - - 3DHW - METN_ECOLI C:[1-231] --MIKLSNITKVFHQGT-----------------RTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTEGSVLVDGQ----ELTT---LSESELTKARRQIGMIF--QHFNLLSSRTVFGNVALPLELDNT--PKDEVKRRVTELLSLVGLGDKHDSYPSNLSGGQKQRVAIARALASNPKVLLCDEATSALDPATTRSILELLKDINRRLG--LTILLITHEMDVVKRICDCVAVISNGELIEQDTVSEVFSH--------------------------------------------------------------------------------------------------------------
21 PsiBlast_CBE 56.5131% -25 - C1 - - 3TUZ METN_ECOLI H:[35-257] ------------------------------HQGTRTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTEGSVLVDGQELTTLSES---E----LTKARRQIGMIF--QHFNLLSSRTVFGNVALPLELDNT--PKDEVKRRVTELLSLVGLGDKHDSYPSNLSGGQKQRVAIARALASNPKVLLCDQATSALDPATTRSILELLKDINRRLG--LTILLITHEMDVVKRICDCVAVISNGELIEQDTVS---EVFSHPKT--------------------------------------------------------------------------------------------------------
42 HHSearch 56.0527%-116 - C1 - - 2AWN MALK_ECOLI B:[2-224] -ASVQLQNVTKAWGE---------------------VVVSKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLETITSGDLFIGEK----RMND---T-----PPAERGVGMVF--QSYALYPHLSVAENMSFGLKLAGA--KKEVINQRVNQVAEVLQLAHLLDRKPKALSGGQRQRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLG--RTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYHY--------------------------------------------------------------------------------------------------------------
6 PsiBlast_PDB 55.5231% -19 - C1 - - 3TUZ METN_ECOLI C:[35-257] ------------------------------HQGTRTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTEGSVLVDGQELTTLSES---E----LTKARRQIGMIF--QHFNLLSSRTVFGNVALPLELDNT--PKDEVKRRVTELLSLVGLGDKHDSYPSNLSGGQKQRVAIARALASNPKVLLCDQATSALDPATTRSILELLKDINRRLG--LTILLITHEMDVVKRICDCVAVISNGELIEQDTVS---EVFSHPKT--------------------------------------------------------------------------------------------------------