@TOME V2.3
(Mar 2018)
Ref.
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Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
Show Ligands of Templates
Complexes Affinity Score
Main Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Complexes Tab
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : spr1016: (2018-01-03 )
MGVVGKQSSSFSLLFWLFSLSSGKVTCFKSGSLGNSSNILPKLSHFVNFTAIGVPRF
Atome Classification :
(20 SA)
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------.........10.--.-...-...20.......---.30-.-.-.......40-----........50......------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
(Atome)
(Ident)
(Tito)
(Num)
(QMean)
(Ligand)
(Uniprot)
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MGVVGKQSSSFS--L-LFW-LFSLSSGKVTCF---KS--G-S-LGNSSNILP-----KLSHFVNFTAIGVPRF------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
9
HHSearch
68.20
30%
-170
- C7 -
-
3L33
-
A4_HUMAN
E:
[16-42]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
S
R
W
-
Y
F
D
V
T
E
G
K
C
A
P
F
---
F
Y
--
G
-
G
-
C
G
G
N
R
N
N
F
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
6
HHSearch
64.06
18%
-185
- C7 -
-
1ZR0
-
TFPI2_HUMAN
B:
[22-49]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
L
-
L
R
Y
-
Y
Y
D
R
Y
T
Q
S
C
R
Q
F
---
L
Y
--
G
-
G
-
C
E
G
N
A
N
N
F
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
3
HHSearch
59.41
14%
-187
- C7 -
-
3AUH
-
?
E:
[19-46]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
I
R
Y
-
F
Y
N
A
A
A
G
A
A
Q
A
F
---
V
Y
--
G
-
G
-
V
R
A
K
R
N
N
F
A
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
22
Fugue
55.06
29%
-33
- C3 -
-
5DO7
-
ABCG5_HUMAN
A:
[34-650]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EP
H
S
L
G
I
L
HASYSRQI
L
K
D
V
S
L
Y
V
E
S
G
Q
--
I
-
M
C
I
-
L
G
S
S
G
S
G
K
T
T
L
L
---
D
A
M
S
G
-
R
-
L
G
R
A
G
T
F
L
G
-------
E
V
Y
V
N
G
R
A
L
R
R
E
Q
F
QDC
F
S
Y
V
L
Q
S
D
T
L
LSSLT
V
R
E
T
L
H
Y
T
A
L
L
A
I
RRGN
P
G
S
F
Q
K
K
V
E
A
V
M
A
E
L
SLSHVADRLIGNYSLGGIS
T
G
E
R
R
R
V
S
I
A
A
Q
L
L
Q
DPK
V
M
L
F
D
EPTTGLD
C
M
T
A
N
Q
I
V
V
L
L
V
E
L
A
R
R
N
R
I
V
V
L
TIHQPRSELFQLFD
K
I
A
I
L
S
FGEL
I
F
C
G
T
P
A
E
M
L
D
F
FNDCGYPCPEHSN
P
F
D
F
Y
M
D
L
T
S
VDTQSKERE
I
E
T
S
K
R
V
Q
M
I
E
S
A
YKKS
A
I
C
H
K
T
L
K
N
I
E
R
M
K
H
L
KTLPM
V
P
F
K
T
K
D
SPG
V
F
S
K
L
G
V
L
L
R
R
V
T
R
N
L
V
R
NKLA
V
I
T
R
L
L
Q
N
L
I
M
G
L
F
L
L
F
F
V
LRVRSNVLKGA
I
Q
D
R
V
G
L
L
Y
Q
F
V
G
A
T
P
Y
T
G
M
L
N
A
V
NLF
P
V
L
R
A
V
S
D
Q
E
S
Q
D
GLYQKW
Q
M
M
L
A
Y
A
L
H
V
L
P
F
S
V
V
A
T
M
I
F
S
S
V
CYWTLGLHPE
V
A
R
F
G
Y
F
S
A
A
L
L
A
P
H
L
I
G
E
F
L
T
L
V
L
L
G
I
V
QN
P
N
I
V
N
S
V
V
A
L
L
S
I
A
G
V
L
V
GSGFLRNIQEMPI
P
F
K
I
I
S
Y
F
T
F
Q
K
Y
C
S
E
I
L
V
V
N
E
F
Y
G
L
N
F
T
CAFTQ
G
I
Q
F
I
E
K
TCPGATSRFTM
N
F
L
I
L
Y
S
F
I
P
A
L
V
I
L
G
I
V
V
F
K
I
R
D
H
L
I
S----------------------------------------------------------
7
HHSearch
54.85
19%
-210
- C7 -
-
1JC6
-
VKT9_BUNFA
A:
[21-47]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
P
A
F
-
Y
Y
N
S
H
L
H
K
C
Q
K
F
---
N
Y
--
G
-
G
-
C
G
G
N
A
N
N
F
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
13
Fugue
50.83
26%
-19
- C6 -
-
5BP8
1
?
A:
[6-520]
A
P
R
E
A
E
A
A
A
L
L
A
A
T
V
A
D
PWGLVAPSV
Y
D
T
A
R
L
V
S
LAPWLDG
H
R
E
R
L
G
Y
L
A
K
E
QNQDGSWGAPDGYG
L
V
P
T
L
S
A
V
E
A
L
L
T
E
L
A
R
TDSGAPHLS
P
D
D
L
A
A
A
C
A
D
G
L
G
A
L
R
D
GLLAGPVPDTIG
V
E
F
V
A
P
S
L
L
A
D
I
N
T
R
L
A
A
LTEQAPGKLGAWSG
T
T
L
T
S
PAPDLDG
A
L
L
A
G
V
R
E
M
T
E
Q
APLPEKLWHTLEAVTRDGTRGARPHEGAPPHNGSVGCS
P
A
A
T
A
A
W
L
GAAPDPAA
P
G
V
A
Y
L
R
D
V
Q
A
R
F
GGPVPSITPI
V
Y
F
E
Q
A
W
V
L
N
S
L
A
A
S
G
L
R
Y
E
A
P
A
A
L
L
D
S
L
E
A
G
LTDE
G
I
A
AAPGLPSD
S
D
D
T
A
A
V
L
F
A
L
A
Q
H
G
R
T
H
R
P
D
S
--
L
M
H
F
R
-----
R
D
G
Y
F
S
C
F
GVE
R
T
--
P
-
S
-
T
S
T
N
A
H
I
L
E
-----
A
L
G
H
H
V
T
V
R
P
D
D
A
G
R
Y
G
A
E
I
R
M
I
S
D
W
L
L
D
N
QLPDG
S
W
M
D
KWHAS
P
Y
Y
A
T
A
C
C
A
L
A
L
A
E
FGGPSA
R
A
A
V
D
R
A
A
A
W
A
L
A
T
QRADGSWGRWQGT
T
E
E
T
A
Y
M
V
Q
L
L
M
R
T
RTPGSPG
T
V
A
R
S
A
A
R
G
C
D
A
L
L
A
HDDPASYPGL
W
H
D
KDIYAP
V
T
V
I
R
A
A
R
L
A
A
L
A
L
G
GA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
10
HHSearch
47.54
24%
-104
* C7 *
-
4U32
1
SPIT2_HUMAN
X:
[19-43]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
P
R
W
-
W
Y
N
V
T
D
G
S
C
Q
L
F
---
V
Y
--
G
-
G
-
C
D
G
N
S
N
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
8
HHSearch
46.73
14%
-152
- C7 -
-
1DTX
-
VKTHA_DENAN
A:
[20-47]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
I
-
P
A
F
-
Y
Y
N
Q
K
K
K
Q
C
E
R
F
---
D
W
--
S
-
G
-
C
G
G
N
S
N
R
F
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
5
HHSearch
44.76
14%
-138
- C7 -
-
2M99
-
VKT_NAJAT
A:
[18-46]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
V
-
P
S
Y
-
Y
Y
N
Q
Y
S
N
T
C
H
S
F
---
T
Y
--
S
-
G
-
C
G
G
N
A
N
R
F
R
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
4
HHSearch
44.46
15%
-156
- C7 -
-
1TFX
-
TFPI1_HUMAN
C:
[19-45]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
T
R
Y
-
F
Y
N
N
Q
T
K
Q
C
E
R
F
---
K
Y
--
G
-
G
-
C
L
G
N
M
N
N
F
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
17
Fugue
43.92
25%
-14
- C5 -
-
4S3Q
3
MALQ_ECOLI
A:
[2-691]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ES
K
R
L
D
N
A
A
L
A
A
GISP
N
Y
I
N
AHG
K
P
Q
S
I
S
A
E
T
K
R
R
L
L
D
A
MHQTPVPN
V
M
V
Y
T
S
G
K
K
M
P
M
V
V
E
G
S
G
E
Y
S
W
L
--
L
-
T
T
E
-
E
G
T
Q
Y
K
G
H
V
T
G
G
---
K
A
--
F
-
N
-
L
P
T
K
---
L
P
-----
E
G
Y
H
T
L
T
L
T
Q
D
D
Q
R
A
H
C
R
V
I
V
A
P
KRCYEP
Q
A
L
L
N
K
Q
K
L
W
G
A
C
V
QLYTLRSEKNWGIGD
F
G
D
L
K
A
M
L
V
D
V
A
K
R
GGS
F
I
G
L
N
PIHALYPANPESASPYSPSSRRWLNVIYIDVNAV
E
D
F
H
L
S
E
E
A
Q
A
W
W
Q
L
P
T
T
Q
Q
T
L
Q
Q
A
R
D
ADWVD
Y
S
T
V
T
A
L
K
M
T
A
L
R
M
A
W
K
G
F
A
Q
RDD
E
Q
M
A
A
F
R
Q
F
V
A
E
Q
G
D
S
L
F
W
Q
A
A
F
D
A
L
H
A
Q
Q
V
K
E
DEMRWGWPAWP
E
M
Y
Q
N
V
DS
P
E
V
R
Q
F
C
E
E
H
R
D
D
V
D
F
Y
L
W
L
Q
W
L
A
Y
S
Q
F
A
A
C
W
E
I
S
Q
G
Y
EMPIG
L
Y
R
D
L
A
VGVAEGG
A
E
T
W
C
D
RELYCLK
A
S
V
G
A
P
PDILGPLGQNWG
L
P
P
M
D
P
H
I
I
T
A
R
AY
E
P
F
I
E
L
L
R
A
N
M
QNCG
A
L
R
I
D
HVMSMLRLWWIPYGETADQ
G
A
Y
V
H
Y
P
V
D
D
L
L
S
I
L
A
L
E
S
K
R
H
R
C
M
V
I
G
EDLGTVP
V
E
I
V
G
K
L
R
S
S
G
V
Y
S
Y
K
V
LYFENDHEKTFRAPKAYPEQ
S
M
A
V
AATHDLPT
L
R
G
Y
W
E
C
G
D
L
T
L
G
K
T
L
GLYPD
E
V
V
L
R
G
L
Y
Q
D
R
E
L
A
K
Q
G
L
L
D
A
L
H
K
Y
GCLPKRAGHKASLMSMT
P
T
L
N
R
G
L
Q
R
Y
I
A
D
SNSA
L
L
G
L
Q
P
E
D
W
L
DMAEPVNIPGTSYQYKNWRRKLSAT
L
E
S
M
F
A
D
D
G
V
N
K
L
L
K
D
L
D
R
R
R
R
S
AH
12
HHSearch
43.05
15%
-80
- C7 -
-
2FTM
1
BPT1_BOVIN
B:
[19-44]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
I
R
Y
-
F
Y
N
A
K
A
G
L
C
Q
T
F
---
V
G
--
G
-
G
-
C
R
A
K
R
N
N
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
11
HHSearch
42.90
15%
-75
- C7 -
-
4ISN
-
B:
[19-44]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
F
-
P
R
W
-
Y
Y
D
P
T
E
Q
I
C
K
S
F
---
V
Y
--
G
-
G
-
C
L
G
N
K
N
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
20
Fugue
42.13
24%
-52
- C6 -
-
4M91
-
TUSC3_HUMAN
A:
[2-154]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------S
K
K
E
N
L
L
A
E
K
V
E
Q
L
M
E
W
S
S
R
RS
I
F
R
M
N
G
D
K
F
R
K
F
IKAPPRN
Y
S
M
I
V
M
F
T
A
LQPQRQC
S
V
S
R
Q
A
N
E
E
Y
Q
I
L
A
N
S
W
R
Y
S
S
A
F
S
NK
L
-
F
F
S
-
M
V
D
Y
D
E
G
-
T
D
V
F
---
Q
Q
--
L
-
N
-
M
N
S
A
P
------------
T
F
M
H
F
P
P
K
G
R
P
K
R
ADTFDLQRIGFA
A
E
Q
L
A
K
W
I
A
D
R
TD
V
H
I
R
V
F
R
L---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
18
Fugue
39.26
20%
-1
- C2 -
-
1L2W
-
YOPE_YERPS
I:
[22-78]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------S
V
G
E
M
S
G
R
S
V
S
Q
Q
--
T
-
S
D
Q
-
Y
A
N
N
L
A
G
R
T
E
S
P
---
Q
G
--
S
-
S
-
L
--
A
S
R
I
I
E
-----
R
L
S
S
V
A
H
S
V
I
G
F
I
Q
R
M
F-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2
HHSearch
37.41
35%
-130
- C1 -
-
2DZL
-
UBAD2_HUMAN
A:
[2-29]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
S
S
--
G
-
S
-
S
G
M
S
V
N
M
D
E
L
R
H
Q
V
M
I
N
Q
F
V
L
A
A
G
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
14
Fugue
33.44
14%
-39
- C6 -
-
2LTF
-
BPX_BPP2
A:
[1-71]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
K
T
F
A
L
Q
G
D
T
L
D
--
A
-
I
C
V
R
Y
Y
G
R
T
E
G
V
V
E
T
V
---
L
A
--
A
-
N
-
P
G
L
A
E
L
-
G
A
-----
V
L
P
H
G
T
A
V
E
L
P
D
V
Q
T
A
PVAETVNLWEVEHH----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
16
Fugue
32.86
23%
33
* C6 *
-
4NQA
3
NR1H2_HUMAN
I:
[5-389]
-------------------------------------------------------------------------------------------------------------------------------------------------------KGPAPKMLGHELCRVCGDKASGFHYNVLSCEGCKGFFRRSVVRGGARRYACRGGGTCQMDAFMRRKCQQCRLRKCKEAGMREQCVLSEEQIRKKKIRKQQQQESQSQSQSPVGPQGSSSSASGPGASPGGSEAGSQGSGEGEGVQLTAAQELMIQQLVAA
Q
L
Q
C
N
K
R
S
F
S
--------------
D
Q
P
K
V
T
P
W
---
P
L
--
G
-
A
D
P
Q
S
R
D
A
R
Q
Q
-----
R
F
A
H
F
T
E
L
A
I
I
S
V
Q
E
I
VDFAKQVPGFLQLGREDQIALLKASTIEIMLLETARRYNHETECITFLKDFTYSKDDFHRAGLQVEFINPIFEFSRAMRRLGLDDAEYALLIAINIFSADRPNVQEPGRVEALQQPYVEALLSYTRIKRPQDQLRFPRMLMKLVSLRTLSSVHSEQVFALRLQDKKLPPLLSEIWDV---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
15
Fugue
23.72
12%
20
- C6 -
-
1HYW
-
HCP_LAMBD
A:
[1-58]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
T
R
Q
E
E
L
A
A
A
R
A
--
A
-
L
H
D
-
L
M
T
-
G
K
R
V
A
T
V
Q
---
K
D
--
G
R
R
-
V
E
F
T
A
T
S
V
S
-----
D
L
K
K
Y
I
A
E
L
E
V
Q
T
G
M
T
Q-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
19
Fugue
23.31
16%
-26
- C4 -
-
4QIW
-
RPOP_THEKO
P:
[8-49]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
C
A
K
C
G
K
E
--------------
V
E
L
D
L
A
T
A
R
E
V
---
R
C
--
P
-
Y
-
C
G
S
K
I
L
Y
K
P
-----
R
P
R
V
A
R
R
V
K
A
I
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------