@TOME V2.3
(Mar 2018)
Ref.
-
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Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
Show Ligands of Templates
Complexes Affinity Score
Main Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Complexes Tab
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : spr1357: (2018-01-10 )
MEQKEKHFSLSWFFKWFLDNKAITVFLVTLLLGLNLFILSKISFLFSPVLDFLAVVMLPVILSGLLYYLLNPIVDWMEKHKVNRVIAITIVFVIIALFIIWGLAVAIPNLQRQVLTFARNVPVYLEDIDRIVNGLVAQHLPDDFRPQLEQVLTNFSSQATVLASKVSSQAVNWVSAFISGASQVIVALIIVPFMLFYLLRDGKGLRNYLTQFIPRKLKEPVGQVLSDVNQQLSNYVRGQVTVAIIVAVMFIIFFKIIGLRYAVTLGVTAGILNLVPYLGSFLAMLPALVLGLIAGPVMLLKVVIVFIVEQTIEGRFVSPLILGSQLNIHPINVLFVLLTSGSMFGIWGVLLGIPVYASAKVVISAIFEWYKVVSGLYELEGEEVKSEQ
Atome Classification :
(20 SA)
.........10........20..--......30.-.......40........50........60........70-...--.....80........90........100..--....---.110.......120-----.......130..--.....140.......150...-....160.--......170.......180.......190.......200.......210.......220.......230.......240.......250.......260.......270.......280.......290.......300.......310.......320.......330.......340.......350.......360.......370.--------......380.....-.--
(Atome)
(Ident)
(Tito)
(Num)
(QMean)
(Ligand)
(Uniprot)
MEQ
K
E
KHF
S
L
S
W
F
F
K
W
F
LDN
K
A
I
--
T
V
F
L
V
T
L
L
L
-
G
L
N
L
F
I
L
S
K
I
S
F
L
F
S
P
V
L
D
F
L
A
V
V
M
L
P
V
I
L
S
G
L
L
Y
Y
L
L
N
-
P
I
V
--
D
W
M
E
KHKVN
R
V
I
A
I
T
I
V
F
V
I
I
A
L
F
I
I
W
G
L
A
--
V
AI
P
---
N
L
Q
R
Q
V
L
T
F
A
RNVP-----
V
Y
L
E
D
I
D
R
I
V
N
G
--
L
V
A
Q
HLPD
D
F
R
P
Q
L
E
Q
V
L
T
NF-SS
Q
A
T
V
L
A
--
S
K
V
S
S
Q
A
V
N
W
V
S
A
F
IS
G
A
S
Q
V
I
V
A
L
I
I
V
P
F
M
L
F
Y
L
LRDG
K
G
L
R
N
Y
L
T
Q
F
I
P
R
K
L
K
E
P
V
G
Q
V
L
S
D
V
N
Q
Q
L
S
N
Y
VRG
Q
V
T
V
A
I
I
V
A
V
M
F
I
I
F
F
K
I
IGL
R
Y
A
V
T
L
G
V
T
A
G
I
L
N
L
V
P
Y
L
G
S
F
L
A
M
L
P
A
L
V
L
G
L
IA
G
P
V
M
L
L
K
V
V
I
V
F
I
V
E
Q
TIEGRFV
S
P
L
I
LGSQLN
I
H
P
I
N
V
L
F
V
L
LTSG
S
M
F
G
I
W
G
V
L
LGIPVYA
S
A
K
V
V
I
S
A
I
F
E
W
Y
K
V
V
--------
S
G
L
Y
ELEGEEVKSE-Q--
44
Fugue
63.91
20%
-20
- C4 -
-
5T1P
2
?
A:
[22-347]
-------------
I
D
E
N
L
I
K
A
A
Q
--
A
E
G
R
V
N
S
L
A
M
P
D
T
W
---
A
N
W
K
D
T
W
A
D
L
K
N
L
Y
----------
D
I
E
H
S
D
T
D
M
S
S
A
--
Q
E
I
A
K
F
K
T
E
K
K
N
A
S
G
D
I
G
D
V
G
A
S
F
G
E
I
A
V
K
Q
G
V
A
Q
P
F
KT
S
Y
W
D
Q
I
P
T
W
A
K
D
K
D
GNWLL
A
Y
T
G
T
I
A
F
I
V
N
K
--
D
V
V
K
D
I
P
K
T
-----
W
Q
D
L
L
K
G
-
N
Y
K
I
T
V
----------------
G
D
V
S
V
A
A
Q
A
V
S
A
V
L
A
A
N
Y
A
L
G
G
D
E
K
D
L
S
P
A
L
A
F
F
N
T
L
A
K
Q
G
R
-------
L
V
N
N
D
V
S
I
A
N
L
E
K
G
E
V
E
V
G
L
V
W
--------
D
F
N
G
L
G
Y
R
D
K
V
G
-
K
D
R
Y
E
V
L
I
P
A
D
G
S
V
I
S
G
Y
T
T
I
I
N
K
Y
-
A
K
H
P
N
A
A
K
L
A
R
E
F
I
L
S
D
K
G
Q
I
N
L
A
K
G
-------
Y
A
R
P
I
R
I
D
H
I
T
L
P
D
D
----
I
K
A
K
L
L
P
S
E
Q
Y
K
N
A
R
A
-
I
K
D
Q
K
A
W
E
K
S
A
--------
K
E
L
P
Q
L
W
Q
E
K
V
I
V
D
M
K
--
35
Fugue
49.43
11%
-157
* C3 *
-
3B9W
2
?
A:
[8-369]
---------------
I
N
E
A
R
L
V
A
--
Q
Y
N
Y
S
I
N
I
L
-
A
M
L
L
V
G
F
G
F
L
M
V
F
V
R
R
Y
G
F
S
A
T
T
G
T
Y
L
V
V
A
T
G
L
P
L
Y
I
L
L
-
R
A
N
GI
F
G
H
A
L
T
P
H
S
V
D
A
V
I
Y
A
E
F
A
V
A
T
G
L
I
A
M
G
A
V
--
L
G
R
L
---
R
V
F
Q
Y
A
L
L
A
L
F
I
V
P
-----
V
Y
L
L
N
E
W
L
V
L
D
N
AS
G
L
T
E
G
F
Q
D
S
A
G
S
I
A
I
H
A
F
G
A
Y
-
F
G
L
G
V
S
I
A
LT
T
A
A
Q
R
A
Q
P
I
E
S
D
A
T
S
D
R
F
S
M
L
G
S
M
V
L
W
L
F
W
P
S
F
A
T
-----------------------
A
I
V
P
F
E
Q
M
P
Q
T
I
V
N
T
L
L
A
L
C
G
A
T
L
A
T
Y
F
L
S
A
L
F
H
K
G
K
A
S
I
V
D
M
A
N
A
A
L
A
G
G
V
A
I
G
S
V
C
N
I
V
G
P
V
G
A
F
V
I
G
L
L
G
G
A
I
S
V
V
G
F
V
F
---
I
Q
P
M
L
E
S
K
A
K
T
I
D
T
C
G
-
V
H
N
L
H
G
L
P
G
L
L
G
G
F
S
A
I
L
I
V
P
G
I
A
V
A
Q
L
T
G
I
G
I
T
L
A
L
A
L
I
G
G
V
I
A
G
A
L
I
K
L
T
GTTKQ
A
Y
E
D
S
H
E
F
I
H
L
A
G
P
-
E
DE
39
Fugue
48.52
18%
-48
* C4 *
-
3WZM
-
?
A:
[15-278]
-
M
R
T
R
S
T
I
S
T
P
N
G
I
T
W
Y
Y
E
Q
E
G
T
G
P
D
V
V
L
V
P
D
G
L
-
G
E
C
Q
M
F
D
S
S
V
S
Q
I
A
A
Q
G
F
R
V
T
T
F
D
M
P
G
M
S
R
S
A
K
A
P
P
E
T
Y
-
T
E
V
--
T
---
A
Q
K
L
A
S
Y
V
I
S
V
L
D
A
L
D
I
K
H
A
T
V
W
G
C
A
--
S
G
A
S
---
T
V
V
A
L
L
L
G
Y
P
---------------
D
R
I
R
N
A
--
M
C
H
E
-
L
P
T
-------
K
L
L
D
H
L
-
S
N
T
A
V
L
E
D
--
E
E
I
S
K
I
L
A
N
V
M
L
N
D
V
S
G
G
--------------------------------
S
E
A
W
Q
A
M
G
D
E
V
H
A
R
L
H
K
N
Y
P
V
W
A
R
G
----------------------
Y
P
R
T
I
P
P
S
A
P
V
K
D
L
E
A
L
R
G
K
P
--------------------------
L
D
W
T
V
G
A
A
T
P
T
E
S
F
F
D
N
I
V
T
A
T
K
A
G
V
N
I
G
L
L
-
P
G
M
H
F
---------
P
Y
V
S
H
P
D
V
F
A
K
Y
V
V
E
T
T
Q
K
H
--------
L
-----------------
14
PsiBlast_PDB
46.75
28%
-151
- C5 -
-
1IBE
1
HBA_HORSE
A:
[60-139]
-----------------------------------------------------------------------------------------
K
K
V
G
D
A
L
T
L
A
V
G
H
L
D
D
L
P
G
A
L
--
S
D
L
S
---
N
L
H
A
H
K
L
---
R
V
D
P
-----
V
N
F
K
L
L
S
H
C
L
L
S
--
T
L
A
V
H
L
P
N
D
F
T
P
A
V
H
A
S
L
D
K
F
L
S
S
V
S
T
V
L
T
--
S
K
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
10
PsiBlast_PDB
46.45
28%
-155
- C5 -
-
2ZLU
1
HBA_HORSE
A:
[60-139]
-----------------------------------------------------------------------------------------
K
K
V
G
D
A
L
T
L
A
V
G
H
L
D
D
L
P
G
A
L
--
S
D
L
S
---
N
L
H
A
H
K
L
---
R
V
D
P
-----
V
N
F
K
L
L
S
H
C
L
L
S
--
T
L
A
V
H
L
P
N
D
F
T
P
A
V
H
A
S
L
D
K
F
L
S
S
V
S
T
V
L
T
--
S
K
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
9
PsiBlast_PDB
45.85
28%
-142
- C5 -
-
2ZLT
1
HBA_HORSE
A:
[60-139]
-----------------------------------------------------------------------------------------
K
K
V
G
D
A
L
T
L
A
V
G
H
L
D
D
L
P
G
A
L
--
S
D
L
S
---
N
L
H
A
H
K
L
---
R
V
D
P
-----
V
N
F
K
L
L
S
H
C
L
L
S
--
T
L
A
V
H
L
P
N
D
F
T
P
A
V
H
A
S
L
D
K
F
L
S
S
V
S
T
V
L
T
--
S
K
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
4
PsiBlast_PDB
45.51
28%
-152
- C5 -
-
1NS6
1
HBA_HORSE
A:
[60-139]
-----------------------------------------------------------------------------------------
K
K
V
G
D
A
L
T
L
A
V
G
H
L
D
D
L
P
G
A
L
--
S
D
L
S
---
N
L
H
A
H
K
L
---
R
V
D
P
-----
V
N
F
K
L
L
S
H
C
L
L
S
--
T
L
A
V
H
L
P
N
D
F
T
P
A
V
H
A
S
L
D
K
F
L
S
S
V
S
T
V
L
T
--
S
K
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
7
PsiBlast_PDB
45.50
28%
-138
- C5 -
-
1Y8I
1
HBA_HORSE
A:
[60-139]
-----------------------------------------------------------------------------------------
K
K
V
G
D
A
L
T
L
A
V
G
H
L
D
D
L
P
G
A
L
--
S
D
L
S
---
N
L
H
A
H
K
L
---
R
V
D
P
-----
V
N
F
K
L
L
S
H
C
L
L
S
--
T
L
A
V
H
L
P
N
D
F
T
P
A
V
H
A
S
L
D
K
F
L
S
S
V
S
T
V
L
T
--
S
K
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
8
PsiBlast_PDB
45.19
28%
-143
- C5 -
-
1Y8K
1
HBA_HORSE
A:
[60-139]
-----------------------------------------------------------------------------------------
K
K
V
G
D
A
L
T
L
A
V
G
H
L
D
D
L
P
G
A
L
--
S
D
L
S
---
N
L
H
A
H
K
L
---
R
V
D
P
-----
V
N
F
K
L
L
S
H
C
L
L
S
--
T
L
A
V
H
L
P
N
D
F
T
P
A
V
H
A
S
L
D
K
F
L
S
S
V
S
T
V
L
T
--
S
K
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
5
PsiBlast_PDB
45.16
28%
-144
- C5 -
-
1NS9
1
HBA_HORSE
A:
[60-139]
-----------------------------------------------------------------------------------------
K
K
V
G
D
A
L
T
L
A
V
G
H
L
D
D
L
P
G
A
L
--
S
D
L
S
---
N
L
H
A
H
K
L
---
R
V
D
P
-----
V
N
F
K
L
L
S
H
C
L
L
S
--
T
L
A
V
H
L
P
N
D
F
T
P
A
V
H
A
S
L
D
K
F
L
S
S
V
S
T
V
L
T
--
S
K
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
6
PsiBlast_PDB
44.94
28%
-138
- C5 -
-
1Y8H
1
HBA_HORSE
A:
[60-139]
-----------------------------------------------------------------------------------------
K
K
V
G
D
A
L
T
L
A
V
G
H
L
D
D
L
P
G
A
L
--
S
D
L
S
---
N
L
H
A
H
K
L
---
R
V
D
P
-----
V
N
F
K
L
L
S
H
C
L
L
S
--
T
L
A
V
H
L
P
N
D
F
T
P
A
V
H
A
S
L
D
K
F
L
S
S
V
S
T
V
L
T
--
S
K
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
3
PsiBlast_PDB
44.93
28%
-152
- C5 -
-
1G0B
2
HBA_HORSE
A:
[60-139]
-----------------------------------------------------------------------------------------
K
K
V
G
D
A
L
T
L
A
V
G
H
L
D
D
L
P
G
A
L
--
S
D
L
S
---
N
L
H
A
H
K
L
---
R
V
D
P
-----
V
N
F
K
L
L
S
H
C
L
L
S
--
T
L
A
V
H
L
P
N
D
F
T
P
A
V
H
A
S
L
D
K
F
L
S
S
V
S
T
V
L
T
--
S
K
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
22
PsiBlast_CBE
44.91
40%
-107
- C5 -
-
2D5X
2
HBA_HORSE
A:
[95-139]
------------------------------------------------------------------------------------------------------------------------------------
P
-----
V
N
F
K
L
L
S
H
C
L
L
S
--
T
L
A
V
H
L
P
N
D
F
T
P
A
V
H
A
S
L
D
K
F
L
S
S
V
S
T
V
L
T
--
S
K
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
12
PsiBlast_PDB
44.89
28%
-136
- C5 -
-
2ZLW
1
HBA_HORSE
A:
[60-139]
-----------------------------------------------------------------------------------------
K
K
V
G
D
A
L
T
L
A
V
G
H
L
D
D
L
P
G
A
L
--
S
D
L
S
---
N
L
H
A
H
K
L
---
R
V
D
P
-----
V
N
F
K
L
L
S
H
C
L
L
S
--
T
L
A
V
H
L
P
N
D
F
T
P
A
V
H
A
S
L
D
K
F
L
S
S
V
S
T
V
L
T
--
S
K
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
21
PsiBlast_CBE
44.18
40%
-95
- C5 -
-
5C6E
1
HBA_HORSE
A:
[95-139]
------------------------------------------------------------------------------------------------------------------------------------
P
-----
V
N
F
K
L
L
S
H
C
L
L
S
--
T
L
A
V
H
L
P
N
D
F
T
P
A
V
H
A
S
L
D
K
F
L
S
S
V
S
T
V
L
T
--
S
K
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
11
PsiBlast_PDB
44.18
28%
-136
- C5 -
-
2ZLV
1
HBA_HORSE
A:
[60-139]
-----------------------------------------------------------------------------------------
K
K
V
G
D
A
L
T
L
A
V
G
H
L
D
D
L
P
G
A
L
--
S
D
L
S
---
N
L
H
A
H
K
L
---
R
V
D
P
-----
V
N
F
K
L
L
S
H
C
L
L
S
--
T
L
A
V
H
L
P
N
D
F
T
P
A
V
H
A
S
L
D
K
F
L
S
S
V
S
T
V
L
T
--
S
K
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2
PsiBlast_PDB
44.14
28%
-147
- C5 -
-
2MHB
1
HBA_HORSE
A:
[60-139]
-----------------------------------------------------------------------------------------
K
K
V
G
D
A
L
T
L
A
V
G
H
L
D
D
L
P
G
A
L
--
S
D
L
S
---
N
L
H
A
H
K
L
---
R
V
D
P
-----
V
N
F
K
L
L
S
H
C
L
L
S
--
T
L
A
V
H
L
P
N
D
F
T
P
A
V
H
A
S
L
D
K
F
L
S
S
V
S
T
V
L
T
--
S
K
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
24
PsiBlast_CBE
43.67
40%
-103
- C5 -
-
1IWH
1
HBA_HORSE
A:
[95-139]
------------------------------------------------------------------------------------------------------------------------------------
P
-----
V
N
F
K
L
L
S
H
C
L
L
S
--
T
L
A
V
H
L
P
N
D
F
T
P
A
V
H
A
S
L
D
K
F
L
S
S
V
S
T
V
L
T
--
S
K
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
1
PsiBlast_PDB
43.29
30%
-142
- C5 -
-
2DHB
1
HBA_HORSE
A:
[60-139]
-----------------------------------------------------------------------------------------
K
K
V
A
D
G
L
T
L
A
V
G
H
L
D
D
L
P
G
A
L
--
S
D
L
S
---
N
L
H
A
H
K
L
---
R
V
D
P
-----
V
N
F
K
L
L
S
H
C
L
L
S
--
T
L
A
V
H
L
P
N
D
F
T
P
A
V
H
A
S
L
D
K
F
L
S
S
V
S
T
V
L
T
--
S
K
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
13
PsiBlast_PDB
42.95
28%
-148
- C5 -
-
2ZLX
1
HBA_HORSE
A:
[60-139]
-----------------------------------------------------------------------------------------
K
K
V
G
D
A
L
T
L
A
V
G
H
L
D
D
L
P
G
A
L
--
S
D
L
S
---
N
L
H
A
H
K
L
---
R
V
D
P
-----
V
N
F
K
L
L
S
H
C
L
L
S
--
T
L
A
V
H
L
P
N
D
F
T
P
A
V
H
A
S
L
D
K
F
L
S
S
V
S
T
V
L
T
--
S
K
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------