@TOME V2.3
(Mar 2018)
Ref.
-
-
Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
Show Ligands of Templates
Complexes Affinity Score
Main Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Complexes Tab
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : spr1559: (2018-01-14 )
MIILKEFKPMSLLAFENVSKSYGATPALENVSLDIPAGKIVGLLGPNGSGKTTLIKLINGLLQPDQGRVLINDMDPSPATKAVVAYLPDTTYLNEQMKVKEALTYFKTFYKDFNLERAHHLLADLGIDENSRLKKLSKGNKEKVQLILVMSRDARLYVLDEPIGGVDPAARAYILNTIINNYSPTSTVLISTHLISDIEPILDEIVFLKDGKVVRQGNVDDIRYESGESIDQLFRQEFKA
Atome Classification :
(20 SA)
.........10........20.-..----.....30........40........50........60........70----.---..--.--...------.-----.80...---......90..-......-------------------100...---.---------..----------.110--.---.------.------.---------.----...120......-------------.--130.......140.......150.......160.......170.......180-.-..-.-...190.......200.......210.......220--.--..---....230.......240----------------------------------------------------------------------------------------------------
(Atome)
(Ident)
(Tito)
(Num)
(QMean)
(Ligand)
(Uniprot)
M
I
I
L
KEFKP
M
S
L
L
A
F
E
N
V
S
K
SY-GA----TPALE
N
V
S
LDIPA
G
K
I
V
G
L
LGPNGS
G
K
T
T
L
I
K
L
I
N
G
LLQPDQG
R
V
L
-----
I
---ND--M--DPS------P-----AT-
K
A
V
---
V
A
YLPDTTY
L
-
N
E
Q
M
K
V
-------------------
K
E
A
L
T
Y
---
F
---------
K
T
----------
F
Y
K
---D---F------
N
------
L
---------
E
----
R
A
H
H
L
L
A
DLGID-------------
E
--
N
S
R
L
K
K
LSKGNK
E
K
V
Q
L
I
L
V
MSRD
A
R
L
Y
V
LDEPIGGV
D
P
A
A
R
A
Y
I
L
N
T
I
INNY-S-PT-
S
-
T
V
L
I
S
T
H
L
I
S
D
I
E
P
I
L
D
E
I
V
FLKD
G
K
V
V
RQGNVD
D
I
--R--YE---SG
E
S
I
D
Q
L
F
R
Q
E
FKA------------------------------------------------------------------------------------------------------
1
PsiBlast_PDB
91.12
33%
-54
- C1 -
-
4RVC
-
?
A:
[2-236]
----------
T
L
L
E
V
K
D
L
S
G
G
Y
-
T
A
----
Q
N
V
L
E
D
V
T
F
V
V
D
R
G
E
M
V
A
L
I
G
L
N
G
A
G
K
S
T
T
I
K
H
I
I
G
L
M
E
P
R
R
G
A
I
S
-----
I
---
N
G
YR
L
--
A
D
G
------
P
-----
E
T
Y
R
R
Q
---
F
A
Y
I
P
E
T
P
V
L
-
Y
E
E
L
T
L
-------------------
E
E
H
L
R
L
---
A
---------
A
M
----------
A
Y
G
---
L
---
S
------
E
------
A
---------
E
Y
E
R
-
R
L
P
P
L
L
R
E
F
R
L
E
-------------
R
RL
S
S
F
P
A
H
F
S
K
G
M
K
Q
K
V
M
I
V
C
A
F
L
L
E
P
P
L
Y
I
I
D
E
P
F
L
G
L
D
P
L
A
I
H
A
L
L
E
R
M
N
E
Q
K
-
A
-
K
G
-
A
-
G
I
L
L
S
T
H
I
L
A
T
A
E
R
Y
C
D
S
F
V
I
L
H
N
G
R
V
K
A
K
G
T
L
D
D
I
--
R
--
R
Q
F
GL
R
G
A
S
L
D
E
L
Y
------------------------------------------------------------------------------------------------------------
7
PsiBlast_PDB
74.65
27%
-34
- C1 -
-
4P32
1
LPTB_ECOLI
A:
[1-223]
----------
A
T
L
T
A
K
N
L
A
K
A
Y
-
K
G
----
R
R
V
V
E
D
V
S
L
T
V
N
S
G
E
I
V
G
L
L
G
P
N
G
A
G
K
T
T
T
F
Y
M
V
V
G
I
V
P
R
D
A
G
N
I
I
-----
I
---
D
D
--
D
--
D
I
S
LLP
L
H
-
A
-----
R
A
-
R
R
G
---
I
G
Y
L
P
Q
E
A
S
I
-
F
R
R
L
S
V
-------------------
Y
D
N
L
M
A
---
V
---------
L
Q
----------
I
R
D
---
D
---
L
------
S
------
A
---------
E
Q
R
E
D
R
A
N
E
L
M
E
E
F
H
I
E
-------------
H
LR
D
S
M
G
Q
S
L
S
G
G
E
R
R
R
V
E
I
A
R
A
L
A
A
N
P
K
F
I
L
L
D
E
P
F
A
G
V
D
P
I
S
V
I
D
I
K
R
I
I
E
H
L
R
-
D
-
S
G
-
L
-
G
V
L
I
T
D
H
N
V
R
E
T
L
A
V
C
E
R
A
Y
I
V
S
Q
G
H
L
I
A
H
G
T
P
T
E
I
-------------------------------------------------------------------------------------------------------------------------------
4
PsiBlast_PDB
74.43
31%
-26
- C1 -
-
4WBS
-
?
A:
[38-265]
----------
S
S
L
V
V
R
N
L
K
K
R
Y
-
G
S
----
R
T
V
V
K
D
V
S
L
D
V
K
S
G
E
V
V
G
L
L
G
P
N
G
A
G
K
T
T
S
F
Y
M
I
V
G
L
V
P
L
D
A
G
E
I
D
-----
L
---
D
G
--
K
--
S
I
S
LL----
P
-----
I
H
-
K
R
A
S
L
G
L
S
Y
L
P
Q
E
A
S
V
-
F
R
K
L
S
V
-------------------
E
E
N
I
R
A
---
V
L
E
L
QVGDDG
K
R
----------
L
S
K
---
D
---
A
------
I
------
A
---------
S
----
R
T
E
A
L
L
D
E
L
Q
I
S
HLR----------
E
--
N
P
A
L
-
S
L
S
G
G
E
R
R
R
V
E
I
A
R
A
L
A
T
N
P
S
F
I
L
L
D
E
P
F
A
G
V
D
P
I
A
V
L
E
I
Q
K
I
V
K
F
L
K
-
Q
-
R
N
-
I
-
G
V
L
I
T
D
H
N
V
R
E
T
L
G
I
C
D
H
A
Y
I
I
S
D
G
S
V
L
A
A
G
A
P
G
D
I
-------------------------------------------------------------------------------------------------------------------------------
6
PsiBlast_PDB
71.46
28%
-25
- C1 -
-
4QC2
1
?
A:
[2-224]
----------
A
T
L
T
A
K
N
L
A
K
A
Y
-
K
G
----
R
R
V
V
E
D
V
S
L
T
V
N
S
G
E
I
V
G
L
L
G
P
N
G
A
G
K
T
T
T
F
Y
M
V
V
G
I
V
P
R
D
A
G
N
I
I
-----
I
---
D
D
--
D
--
D
I
S
LLP
L
H
-
A
-----
R
A
-
R
R
G
---
I
G
Y
L
P
Q
E
A
S
I
-
F
R
R
L
S
V
-------------------
Y
D
N
L
M
A
---
V
---------
L
Q
----------
I
R
D
---
D
---
L
------
S
------
A
---------
E
Q
R
E
D
R
A
N
E
L
M
E
E
F
H
I
E
-------------
H
LR
D
S
M
G
Q
S
L
S
G
G
E
R
R
R
V
E
I
A
R
A
L
A
A
N
P
K
F
I
L
L
D
E
P
F
A
G
V
D
P
I
S
V
I
D
I
K
R
I
I
E
H
L
R
-
D
-
S
G
-
L
-
G
V
L
I
T
D
H
N
V
R
E
T
L
A
V
C
E
R
A
Y
I
V
S
Q
G
H
L
I
A
H
G
T
P
T
E
I
-------------------------------------------------------------------------------------------------------------------------------
8
PsiBlast_PDB
70.34
27%
-29
- C1 -
-
4P33
6
LPTB_ECOLI
A:
[1-223]
----------
A
T
L
T
A
K
N
L
A
K
A
Y
-
K
G
----
R
R
V
V
E
D
V
S
L
T
V
N
S
G
E
I
V
G
L
L
G
P
N
G
A
G
K
T
T
T
F
Y
M
V
V
G
I
V
P
R
D
A
G
N
I
I
-----
I
---
D
D
--
D
--
D
I
S
LLP
L
H
-
A
-----
R
A
-
R
R
G
---
I
G
Y
L
P
Q
E
A
S
I
-
F
R
R
L
S
V
-------------------
Y
D
N
L
M
A
---
V
---------
L
Q
----------
I
R
D
---
D
---
L
------
S
------
A
---------
E
Q
R
E
D
R
A
N
E
L
M
E
E
F
H
I
E
-------------
H
LR
D
S
M
G
Q
S
L
S
G
G
E
R
R
R
V
E
I
A
R
A
L
A
A
N
P
K
F
I
L
L
D
Q
P
F
A
G
V
D
P
I
S
V
I
D
I
K
R
I
I
E
H
L
R
-
D
-
S
G
-
L
-
G
V
L
I
T
D
H
N
V
R
E
T
L
A
V
C
E
R
A
Y
I
V
S
Q
G
H
L
I
A
H
G
T
P
T
E
I
-------------------------------------------------------------------------------------------------------------------------------
20
PsiBlast_PDB
69.47
27%
-31
- C1 -
-
4P31
1
LPTB_ECOLI
A:
[1-223]
----------
A
T
L
T
A
K
N
L
A
K
A
Y
-
K
G
----
R
R
V
V
E
D
V
S
L
T
V
N
S
G
E
I
V
G
L
L
G
P
N
G
A
G
K
T
T
T
F
Y
M
V
V
G
I
V
P
R
D
A
G
N
I
I
-----
I
---
D
D
--
D
--
D
I
S
LLP
L
H
-
A
-----
R
A
-
R
R
G
---
I
G
Y
L
P
Q
E
A
S
I
-
F
R
R
L
S
V
-------------------
Y
D
N
L
M
A
---
V
---------
L
Q
----------
I
R
D
---
D
---
L
------
S
------
A
---------
E
Q
R
E
D
R
A
N
E
L
M
E
E
F
H
I
E
-------------
H
LR
D
S
M
G
Q
S
L
S
G
G
E
R
R
R
V
E
I
A
R
A
L
A
A
N
P
K
F
I
L
L
D
E
P
F
A
G
V
D
P
I
S
V
I
D
I
K
R
I
I
E
H
L
R
-
D
-
S
G
-
L
-
G
V
L
I
T
D
H
N
V
R
E
T
L
A
V
C
E
R
A
Y
I
V
S
Q
G
H
L
I
A
H
G
T
P
T
E
I
-------------------------------------------------------------------------------------------------------------------------------
38
HHSearch
66.14
24%
-42
- C1 -
-
4YER
2
?
A:
[3-256]
---------
E
D
I
I
V
V
E
N
L
V
K
K
F
-
G
D
----
F
E
A
V
K
G
V
S
F
S
V
K
K
G
E
I
F
A
F
L
G
P
N
G
A
G
K
T
T
T
I
H
M
L
T
T
L
L
K
P
T
S
G
K
A
W
-----
V
---
A
G
--
H
--
D
V
L
------
K
E
P
R
--
E
V
-
R
R
K
---
I
G
I
V
F
Q
D
Q
S
L
-
D
R
E
L
T
A
-------------------
Y
E
N
M
Y
I
---
H
---------
G
K
----------
I
Y
G
Y
G
G
E
---
K
------
L
------
K
---------
K
----
R
I
L
E
L
L
E
F
V
E
L
L
EF-----------
K
--
D
K
P
V
K
T
F
S
G
G
M
A
R
R
L
E
I
A
R
S
L
I
H
E
P
E
V
L
F
L
D
E
P
T
I
G
L
D
P
H
T
R
A
H
M
W
E
Y
I
S
K
M
K
-
K
E
H
N
-
M
-
T
I
F
L
T
T
H
Y
M
D
E
A
E
Q
L
A
D
R
V
A
I
I
D
H
G
K
I
I
A
L
G
T
P
T
E
L
--
K
--
R
M
---
V
--------------------------------------------------------------------------------------------------------------------
35
HHSearch
63.03
25%
-29
- C1 -
-
3FVQ
2
FBPC_NEIG1
B:
[3-230]
----------
A
A
L
H
I
G
H
L
S
K
S
F
-
Q
N
----
T
P
V
L
N
D
I
S
L
S
L
D
P
G
E
I
L
F
I
I
G
A
S
G
C
G
K
T
T
L
L
R
C
L
A
G
F
E
Q
P
D
S
G
E
I
S
-----
L
---
S
G
--
K
--
T
I
F
SKNTNL
P
-----
V
R
-
E
R
R
---
L
G
Y
L
V
Q
E
G
V
L
-
F
P
H
L
T
V
-------------------
Y
R
N
I
A
Y
---
G
---------
L
G
----------
N
G
K
GRT
A
---
Q
------
E
------
R
---------
Q
----
R
I
E
A
M
L
E
L
T
G
I
S
EL-----------
A
--
G
R
Y
P
H
E
L
S
G
G
Q
Q
Q
R
A
A
L
A
R
A
L
A
P
D
P
E
L
I
L
L
D
E
P
F
S
A
L
D
E
Q
L
R
R
Q
I
R
E
D
M
I
A
A
L
R
A
-
N
G
-
K
-
S
A
V
F
V
S
H
D
R
E
E
A
L
Q
Y
A
D
R
I
A
V
M
K
Q
G
R
I
L
Q
T
A
S
P
H
E
L
--
Y
--
R
Q
---
P
--------------------------------------------------------------------------------------------------------------------
34
HHSearch
61.73
23%
-46
* C1 *
-
3RLF
2
MALK_ECOLI
A:
[2-223]
----------
A
S
V
Q
L
Q
N
V
T
K
A
W
-
G
E
----
V
V
V
S
K
D
I
N
L
D
I
H
E
G
E
F
V
V
F
V
G
P
S
G
C
G
K
S
T
L
L
R
M
I
A
G
L
E
T
I
T
S
G
D
L
F
-----
I
---
G
E
--
K
--
R
M
N
------
D
TP---
P
A
-
E
R
G
---
V
G
M
V
F
Q
S
Y
A
L
-
Y
P
H
L
S
V
-------------------
A
E
N
M
S
F
---
G
---------
L
K
----------
L
A
G
---
A
K
K
E
V
------
I
------
N
---------
Q
----
R
V
N
Q
V
A
E
V
L
Q
L
A
HL-----------
L
--
D
R
K
P
K
A
L
S
G
G
Q
R
Q
R
V
A
I
G
R
T
L
V
A
E
P
S
V
F
L
L
D
E
P
L
S
N
L
D
A
A
L
R
V
Q
M
R
I
E
I
S
R
L
H
-
K
R
L
G
-
R
-
T
M
I
Y
V
T
H
D
Q
V
E
A
M
T
L
A
D
K
I
V
V
L
D
A
G
R
V
A
Q
V
G
K
P
L
E
L
--
Y
--
H
-------------------------------------------------------------------------------------------------------------------------
14
PsiBlast_PDB
61.09
26%
-19
- C1 -
-
1G6H
1
LIVG_METJA
A:
[5-239]
---------
M
E
I
L
R
T
E
N
I
V
K
Y
F
-
G
E
----
F
K
A
L
D
G
V
S
I
S
V
N
K
G
D
V
T
L
I
I
G
P
N
G
S
G
K
S
T
L
I
N
V
I
T
G
F
L
K
A
D
E
G
R
V
Y
F
ENKD
I
---
T
N
--
K
--
E
P
A
------
E
-----
L
Y
-
H
Y
G
---
I
V
R
T
F
Q
T
P
Q
P
-
L
K
E
M
T
V
-------------------
L
E
N
L
L
I
---
G
---------
E
I
C
PGES
P
L
N
S
L
F
Y
K
---
K
---
W
IPKE
E
E
M
------
V
---------
E
----
K
A
F
K
I
L
E
F
L
K
L
S
-------------
H
LY
D
R
K
A
G
E
L
S
G
G
Q
M
K
L
V
E
I
G
R
A
L
M
T
N
P
K
M
I
V
M
D
E
P
I
A
G
V
A
P
G
L
A
H
D
I
F
N
H
V
L
E
L
K
-
A
-
K
G
-
I
-
T
F
L
I
I
E
H
R
L
D
I
V
L
N
Y
I
D
H
L
Y
V
M
F
N
G
Q
I
I
A
E
G
R
G
E
E
--------------------------------------------------------------------------------------------------------------------------------
33
HHSearch
60.61
23%
-44
- C1 -
-
2AWN
1
MALK_ECOLI
B:
[2-223]
----------
A
S
V
Q
L
Q
N
V
T
K
A
W
-
G
E
----
V
V
V
S
K
D
I
N
L
D
I
H
E
G
E
F
V
V
F
V
G
P
S
G
C
G
K
S
T
L
L
R
M
I
A
G
L
E
T
I
T
S
G
D
L
F
-----
I
---
G
E
--
K
--
R
M
N
------
D
TP---
P
A
-
E
R
G
---
V
G
M
V
F
Q
S
Y
A
L
-
Y
P
H
L
S
V
-------------------
A
E
N
M
S
F
---
G
---------
L
K
----------
L
A
G
---
A
K
K
E
V
------
I
------
N
---------
Q
----
R
V
N
Q
V
A
E
V
L
Q
L
A
HL-----------
L
--
D
R
K
P
K
A
L
S
G
G
Q
R
Q
R
V
A
I
G
R
T
L
V
A
E
P
S
V
F
L
L
D
E
P
L
S
N
L
D
A
A
L
R
V
Q
M
R
I
E
I
S
R
L
H
-
K
R
L
G
-
R
-
T
M
I
Y
V
T
H
D
Q
V
E
A
M
T
L
A
D
K
I
V
V
L
D
A
G
R
V
A
Q
V
G
K
P
L
E
L
--
Y
--
H
-------------------------------------------------------------------------------------------------------------------------
2
PsiBlast_PDB
58.78
28%
-9
- C1 -
-
1VPL
-
?
A:
[14-251]
----------
G
A
V
V
V
K
D
L
R
K
R
I
-
G
K
----
K
E
I
L
K
G
I
S
F
E
I
E
E
G
E
I
F
G
L
I
G
P
N
G
A
G
K
T
T
T
L
R
I
I
S
T
L
I
K
P
S
S
G
I
V
T
-----
V
FGK
N
V
--
V
--
E
E
P
------
H
-----
E
V
-
R
K
L
---
I
S
Y
L
P
E
E
A
G
A
-
Y
R
N
M
Q
G
-------------------
I
E
Y
L
R
F
---
V
---------
A
G
----------
F
Y
A
---
S
---
S
------
S
S
E
I
E
E
M
V
---------
E
----
R
A
T
E
-
I
A
G
L
G
E
K
-------------
I
--
K
D
R
V
S
T
Y
S
K
G
M
V
R
K
L
L
I
A
R
A
L
M
V
N
P
R
L
A
I
L
D
E
P
T
S
G
L
D
-
V
L
N
A
R
E
V
R
K
I
L
K
Q
A
-
S
-
Q
E
-
G
L
T
I
L
V
S
S
H
N
M
L
E
V
E
F
L
C
D
R
I
A
L
I
H
N
G
T
I
V
E
T
G
T
V
E
E
L
K
E
R
--
Y
K
---
A
-
Q
N
I
E
E
V
F
E
E
V
V
K
-------------------------------------------------------------------------------------------------------
3
PsiBlast_PDB
58.43
28%
-29
- C1 -
-
5X5Y
-
?
B:
[2-224]
----------
A
T
L
K
A
Q
H
L
A
K
S
Y
-
K
G
----
R
Q
V
V
R
D
V
S
M
S
I
D
S
G
Q
I
V
G
L
L
G
P
N
G
A
G
K
T
T
C
F
Y
M
I
V
G
L
V
Q
A
D
Q
G
V
V
R
-----
I
---
D
E
--
Q
--
N
V
T
------
H
LPMHG
R
A
-
R
A
G
---
I
G
Y
L
P
Q
E
A
S
I
-
F
R
K
L
S
V
SDNIMAILETRSDLDRNGR
K
E
A
L
---------------
E
G
----------
L
L
Q
---
E
---
F
------
H
------
I
----------------
H
H
I
R
D
N
L
G
M
----------------------
S
L
S
G
G
E
R
R
R
V
E
I
A
R
A
L
A
S
A
P
K
F
I
L
L
D
E
P
F
A
G
V
D
P
I
S
V
G
D
I
K
Q
I
I
H
H
L
K
-
A
-
K
G
-
I
-
G
I
L
I
T
D
H
N
V
R
E
T
L
D
I
C
E
T
A
Y
I
V
N
D
G
Q
L
I
A
E
G
D
A
E
S
I
-------------------------------------------------------------------------------------------------------------------------------
9
PsiBlast_PDB
56.68
26%
-27
- C1 -
-
1G9X
2
LIVG_METJA
A:
[5-239]
---------
M
E
I
L
R
T
E
N
I
V
K
Y
F
-
G
E
----
F
K
A
L
D
G
V
S
I
S
V
C
K
G
D
V
T
L
I
I
G
P
N
G
S
G
K
S
T
L
I
N
V
I
T
G
F
L
K
A
D
E
G
R
V
Y
F
ENKD
I
---
T
N
--
K
--
E
P
A
------
E
-----
L
Y
-
H
Y
G
---
I
V
R
T
F
Q
T
P
Q
P
-
L
K
E
M
T
V
-------------------
L
E
N
L
L
I
---
G
---------
E
I
NPGES
P
L
N
S
L
F
Y
K
---
K
---
W
IPKE
E
E
M
------
V
---------
E
----
K
A
F
K
I
L
E
F
L
K
L
S
-------------
H
LY
D
R
K
A
G
E
L
S
G
G
Q
M
K
L
V
E
I
G
R
A
L
M
T
N
P
K
M
I
V
M
D
E
P
I
A
G
V
A
P
G
L
A
H
D
I
F
N
H
V
L
E
L
K
-
A
-
K
G
-
I
-
T
F
L
I
I
E
H
R
L
D
I
V
L
N
Y
I
D
H
L
Y
V
M
F
N
G
Q
I
I
A
E
G
R
G
E
E
--------------------------------------------------------------------------------------------------------------------------------
27
Fugue
56.30
25%
9
- C1 -
-
1Z47
-
?
A:
[11-355]
--------
G
S
M
T
I
E
F
V
G
V
E
K
I
Y
P
G
G
----
A
R
S
V
R
G
V
S
F
Q
I
R
E
G
E
M
V
G
L
L
G
P
S
G
S
G
K
T
T
I
L
R
L
I
A
G
L
E
R
P
T
K
G
D
V
W
-----
I
---
G
G
--
K
RV
T
D
L
------
P
-----
P
Q
-
K
R
N
---
V
G
L
V
F
Q
N
Y
A
L
-
F
Q
H
M
T
V
-------------------
Y
D
N
V
S
F
G
L
R
E
---------
K
R
----------
V
P
K
---
D
---
E
------
M
------
D
---------
A
----
R
V
R
E
L
L
R
F
M
R
L
E
-------------
S
YA
N
R
F
P
H
E
L
S
G
G
Q
Q
Q
R
V
A
L
A
R
A
L
A
P
R
P
Q
V
L
L
F
D
E
P
F
A
A
I
D
T
Q
I
R
R
E
L
R
T
F
V
R
Q
V
H
-
D
-
E
M
G
V
-
T
S
V
F
V
T
H
D
Q
E
E
A
L
E
V
A
D
R
V
L
V
L
H
E
G
N
V
E
Q
F
G
T
P
E
E
V
--
Y
EK
P
G
---
T
L
F
V
A
S
F
I
G
E
S
N
V
W
T
R
A
V
Q
NG
R
I
E
V
AG
A
A
L
P
V
DPAVSEG
S
E
V
A
V
V
V
R
PKD
V
E
L
Q
P
A
S
EREAHAQVV
R
S
A
F
KGS
Y
S
A
C
W
I
R
T
KD
G
E
V
W
E
V
H
V
P
SADRHRWSPG
A
W
V
H
M
N
V
T
R
W
F
I
F
P
R
42
HHSearch
54.43
25%
-5
- C1 -
-
4PL0
2
MCJD_ECOLX
B:
[342-569]
---------
K
L
N
L
S
I
R
E
L
S
F
S
Y
-
S
D
D---
K
K
I
L
N
S
V
S
L
D
L
F
T
G
K
M
Y
S
L
T
G
P
S
G
S
G
K
S
T
L
V
K
I
I
S
G
Y
Y
K
N
Y
F
G
D
I
Y
-----
L
---
N
D
--
I
--
S
L
R
------
N
IS
D
E
-
D
L
-
N
D
A
---
I
Y
Y
L
T
Q
D
D
Y
I
-
F
M
-
D
T
L
-------------------
R
F
N
L
R
L
---
A
---------
N
Y
----------
D
---------
A
------
S
------
E
---------
N
----
E
I
F
K
V
L
K
L
A
N
L
S
VVNN
E
P
V
S
LD
T
H
-
L
--
I
N
R
G
N
N
Y
S
G
G
Q
K
Q
R
I
S
L
A
R
L
F
L
R
K
P
A
I
I
I
I
D
E
A
T
S
A
L
D
Y
I
N
E
S
E
I
L
S
S
I
R
T
H
F
---
P
D
-
A
-
L
I
I
N
I
S
H
R
I
N
L
L
E
-
C
S
D
C
V
Y
V
L
N
E
G
N
I
V
A
S
G
H
F
R
D
L
--
M
--
V
S
---
N
--------------------------------------------------------------------------------------------------------------------
39
HHSearch
54.27
25%
-29
- C1 -
-
5MKK
-
?
B:
[335-563]
---------
S
G
E
V
R
F
E
G
V
G
L
K
R
-
D
G
----
R
W
L
L
R
G
L
T
L
T
I
P
E
G
M
T
L
G
I
T
G
R
T
G
S
G
K
S
L
L
A
A
L
V
P
R
L
L
D
P
S
E
G
R
V
Y
-----
V
---
G
G
--
H
--
E
A
R
RIP
L
--
A
-----
V
L
-
R
K
A
---
V
G
V
A
P
Q
E
P
F
L
-
F
S
-
E
T
I
-------------------
L
E
N
I
A
F
---
G
---------
L
D
----------
E
V
---------------
D
------
R
---------
E
----
R
V
E
W
A
A
R
L
A
G
I
H
E
E
I
L
A
FPKGYETV
L
--
G
E
R
G
I
T
L
S
G
G
Q
R
Q
R
V
A
L
A
R
A
L
A
K
R
P
K
I
L
I
L
D
D
A
L
S
A
V
D
A
E
T
E
A
R
I
L
Q
G
L
K
T
V
L
-
G
--
K
-
Q
-
T
T
L
L
I
S
H
R
T
A
A
L
R
-
H
A
D
W
I
I
V
L
D
G
G
R
I
V
E
E
G
T
H
E
S
L
--
L
--
Q
A
---
G
G
-------------------------------------------------------------------------------------------------------------------
22
Fugue
54.26
24%
-6
- C1 -
-
3TUZ
1
METN_ECOLI
H:
[23-362]
----------
H
M
I
K
L
S
N
I
T
K
V
F
-
H
Q
GTRT
I
Q
A
L
N
N
V
S
L
H
V
P
A
G
Q
I
Y
G
V
I
G
A
S
G
A
G
K
S
T
L
I
R
C
V
N
L
L
E
R
P
T
E
G
S
V
L
-----
V
---
D
G
--
Q
--
E
L
T
------
T
-----
L
S
-
E
S
E
---
L
T
K
A
R
R
Q
I
G
M
I
F
Q
H
F
N
L
-------------------
L
S
S
R
T
V
---
F
---------
G
N
----------
V
A
L
---
P
---
L
------
E
------
L
DNTPKDEVK
R
----
R
V
T
E
L
L
S
L
V
G
L
G
DK-----------
H
--
D
S
Y
P
S
N
L
S
G
G
Q
K
Q
R
V
A
I
A
R
A
L
A
S
N
P
K
V
L
L
C
D
Q
A
T
S
A
L
D
P
A
T
T
R
S
I
L
E
L
L
K
D
I
N
-
R
-
R
L
-
G
L
T
I
L
L
I
T
H
E
M
D
V
V
K
R
I
C
D
C
V
A
V
I
S
N
G
E
L
I
E
Q
D
T
V
S
E
V
--
F
--
S
H
---
P
K
T
P
L
A
Q
K
F
I
Q
S
T
L
H
LDIPEDYQERLQAEPFTDCVPMLRLEFTGQSVDAPLLSETARRFNVNNNIISAQMDYAGGVKFGIMLTEMHGTQQDTQAAIAWLQEHHVKVEV---------
43
HHSearch
53.98
25%
-6
- C1 -
-
5EG1
2
MCJD_ECOLX
B:
[342-569]
---------
K
L
N
L
S
I
R
E
L
S
F
S
Y
-
S
D
D---
K
K
I
L
N
S
V
S
L
D
L
F
T
G
K
M
Y
S
L
T
G
P
S
G
S
G
K
S
T
L
V
K
I
I
S
G
Y
Y
K
N
Y
F
G
D
I
Y
-----
L
---
N
D
--
I
--
S
L
R
------
N
IS
D
E
-
D
L
-
N
D
A
---
I
Y
Y
L
T
Q
D
D
Y
I
-
F
M
-
D
T
L
-------------------
R
F
N
L
R
L
---
A
---------
N
Y
----------
D
---------
A
------
S
------
E
---------
N
----
E
I
F
K
V
L
K
L
A
N
L
S
VVNN
E
P
V
S
LD
T
H
-
L
--
I
N
R
G
N
N
Y
S
G
G
Q
K
Q
R
I
S
L
A
R
L
F
L
R
K
P
A
I
I
I
I
D
E
A
T
S
A
L
D
Y
I
N
E
S
E
I
L
S
S
I
R
T
H
F
---
P
D
-
A
-
L
I
I
N
I
S
H
R
I
N
L
L
E
-
C
S
D
C
V
Y
V
L
N
E
G
N
I
V
A
S
G
H
F
R
D
L
--
M
--
V
S
---
N
--------------------------------------------------------------------------------------------------------------------
49
HHSearch
51.98
24%
-36
- C1 -
-
2YYZ
1
?
A:
[2-224]
----------
P
S
I
R
V
V
N
L
K
K
Y
F
-
G
K
----
V
K
A
V
D
G
V
S
F
E
V
K
D
G
E
F
V
A
L
L
G
P
S
G
C
G
K
T
T
T
L
L
M
L
A
G
I
Y
K
P
T
S
G
E
I
Y
-----
F
---
D
D
--
V
--
L
V
N
------
D
IP---
P
K
-
Y
R
E
---
V
G
M
V
F
Q
N
Y
A
L
-
Y
P
H
M
T
V
-------------------
F
E
N
I
A
F
---
P
---------
L
R
----------
A
R
R
---
I
SKD
E
------
V
------
E
---------
K
----
R
V
V
E
I
A
R
K
L
L
I
D
NL-----------
L
--
D
R
K
P
T
Q
L
S
G
G
Q
Q
Q
R
V
A
L
A
R
A
L
V
K
Q
P
K
V
L
L
F
D
E
P
L
S
N
L
D
A
N
L
R
M
I
M
R
A
E
I
K
H
L
Q
-
Q
E
L
G
-
I
-
T
S
V
Y
V
T
H
D
Q
A
E
A
M
T
M
A
S
R
I
A
V
F
N
Q
G
K
L
V
Q
Y
G
T
P
D
E
V
--
Y
--
D
S
------------------------------------------------------------------------------------------------------------------------