@TOME V2.3
(Mar 2018)

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Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : spr1559: (2018-01-14 )
MIILKEFKPMSLLAFENVSKSYGATPALENVSLDIPAGKIVGLLGPNGSGKTTLIKLINGLLQPDQGRVLINDMDPSPATKAVVAYLPDTTYLNEQMKVKEALTYFKTFYKDFNLERAHHLLADLGIDENSRLKKLSKGNKEKVQLILVMSRDARLYVLDEPIGGVDPAARAYILNTIINNYSPTSTVLISTHLISDIEPILDEIVFLKDGKVVRQGNVDDIRYESGESIDQLFRQEFKA

Atome Classification :

(20 SA) .........10........20.-..----.....30........40........50........60........70----.---..--.--...------.-----.80...---......90..-......-------------------100...---.---------..----------.110--.---.------.------.---------.----...120......-------------.--130.......140.......150.......160.......170.......180-.-..-.-...190.......200.......210.......220--.--..---....230.......240----------------------------------------------------------------------------------------------------
(Atome) (Ident) (Tito) (Num) (QMean) (Ligand) (Uniprot) MIILKEFKPMSLLAFENVSKSY-GA----TPALENVSLDIPAGKIVGLLGPNGSGKTTLIKLINGLLQPDQGRVL-----I---ND--M--DPS------P-----AT-KAV---VAYLPDTTYL-NEQMKV-------------------KEALTY---F---------KT----------FYK---D---F------N------L---------E----RAHHLLADLGID-------------E--NSRLKKLSKGNKEKVQLILVMSRDARLYVLDEPIGGVDPAARAYILNTIINNY-S-PT-S-TVLISTHLISDIEPILDEIVFLKDGKVVRQGNVDDI--R--YE---SGESIDQLFRQEFKA------------------------------------------------------------------------------------------------------
1 PsiBlast_PDB 91.1233% -54 - C1 - - 4RVC - ? A:[2-236] ----------TLLEVKDLSGGY-TA----QNVLEDVTFVVDRGEMVALIGLNGAGKSTTIKHIIGLMEPRRGAIS-----I---NGYRL--ADG------P-----ETYRRQ---FAYIPETPVL-YEELTL-------------------EEHLRL---A---------AM----------AYG---L---S------E------A---------EYER-RLPPLLREFRLE-------------RRLSSFPAHFSKGMKQKVMIVCAFLLEPPLYIIDEPFLGLDPLAIHALLERMNEQK-A-KG-A-GILLSTHILATAERYCDSFVILHNGRVKAKGTLDDI--R--RQFGLRGASLDELY------------------------------------------------------------------------------------------------------------
7 PsiBlast_PDB 74.6527% -34 - C1 - - 4P32 LPTB_ECOLI A:[1-223] ----------ATLTAKNLAKAY-KG----RRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNII-----I---DD--D--DISLLPLH-A-----RA-RRG---IGYLPQEASI-FRRLSV-------------------YDNLMA---V---------LQ----------IRD---D---L------S------A---------EQREDRANELMEEFHIE-------------HLRDSMGQSLSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKRIIEHLR-D-SG-L-GVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEI-------------------------------------------------------------------------------------------------------------------------------
4 PsiBlast_PDB 74.4331% -26 - C1 - - 4WBS - ? A:[38-265] ----------SSLVVRNLKKRY-GS----RTVVKDVSLDVKSGEVVGLLGPNGAGKTTSFYMIVGLVPLDAGEID-----L---DG--K--SISLL----P-----IH-KRASLGLSYLPQEASV-FRKLSV-------------------EENIRA---VLELQVGDDGKR----------LSK---D---A------I------A---------S----RTEALLDELQISHLR----------E--NPAL-SLSGGERRRVEIARALATNPSFILLDEPFAGVDPIAVLEIQKIVKFLK-Q-RN-I-GVLITDHNVRETLGICDHAYIISDGSVLAAGAPGDI-------------------------------------------------------------------------------------------------------------------------------
6 PsiBlast_PDB 71.4628% -25 - C1 - - 4QC2 ? A:[2-224] ----------ATLTAKNLAKAY-KG----RRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNII-----I---DD--D--DISLLPLH-A-----RA-RRG---IGYLPQEASI-FRRLSV-------------------YDNLMA---V---------LQ----------IRD---D---L------S------A---------EQREDRANELMEEFHIE-------------HLRDSMGQSLSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKRIIEHLR-D-SG-L-GVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEI-------------------------------------------------------------------------------------------------------------------------------
8 PsiBlast_PDB 70.3427% -29 - C1 - - 4P33 LPTB_ECOLI A:[1-223] ----------ATLTAKNLAKAY-KG----RRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNII-----I---DD--D--DISLLPLH-A-----RA-RRG---IGYLPQEASI-FRRLSV-------------------YDNLMA---V---------LQ----------IRD---D---L------S------A---------EQREDRANELMEEFHIE-------------HLRDSMGQSLSGGERRRVEIARALAANPKFILLDQPFAGVDPISVIDIKRIIEHLR-D-SG-L-GVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEI-------------------------------------------------------------------------------------------------------------------------------
20 PsiBlast_PDB 69.4727% -31 - C1 - - 4P31 LPTB_ECOLI A:[1-223] ----------ATLTAKNLAKAY-KG----RRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNII-----I---DD--D--DISLLPLH-A-----RA-RRG---IGYLPQEASI-FRRLSV-------------------YDNLMA---V---------LQ----------IRD---D---L------S------A---------EQREDRANELMEEFHIE-------------HLRDSMGQSLSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKRIIEHLR-D-SG-L-GVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEI-------------------------------------------------------------------------------------------------------------------------------
38 HHSearch 66.1424% -42 - C1 - - 4YER ? A:[3-256] ---------EDIIVVENLVKKF-GD----FEAVKGVSFSVKKGEIFAFLGPNGAGKTTTIHMLTTLLKPTSGKAW-----V---AG--H--DVL------KEPR--EV-RRK---IGIVFQDQSL-DRELTA-------------------YENMYI---H---------GK----------IYGYGGE---K------L------K---------K----RILELLEFVELLEF-----------K--DKPVKTFSGGMARRLEIARSLIHEPEVLFLDEPTIGLDPHTRAHMWEYISKMK-KEHN-M-TIFLTTHYMDEAEQLADRVAIIDHGKIIALGTPTEL--K--RM---V--------------------------------------------------------------------------------------------------------------------
35 HHSearch 63.0325% -29 - C1 - - 3FVQ FBPC_NEIG1 B:[3-230] ----------AALHIGHLSKSF-QN----TPVLNDISLSLDPGEILFIIGASGCGKTTLLRCLAGFEQPDSGEIS-----L---SG--K--TIFSKNTNLP-----VR-ERR---LGYLVQEGVL-FPHLTV-------------------YRNIAY---G---------LG----------NGKGRTA---Q------E------R---------Q----RIEAMLELTGISEL-----------A--GRYPHELSGGQQQRAALARALAPDPELILLDEPFSALDEQLRRQIREDMIAALRA-NG-K-SAVFVSHDREEALQYADRIAVMKQGRILQTASPHEL--Y--RQ---P--------------------------------------------------------------------------------------------------------------------
34 HHSearch 61.7323% -46 * C1 * - 3RLF MALK_ECOLI A:[2-223] ----------ASVQLQNVTKAW-GE----VVVSKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLETITSGDLF-----I---GE--K--RMN------DTP---PA-ERG---VGMVFQSYAL-YPHLSV-------------------AENMSF---G---------LK----------LAG---AKKEV------I------N---------Q----RVNQVAEVLQLAHL-----------L--DRKPKALSGGQRQRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLH-KRLG-R-TMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLEL--Y--H-------------------------------------------------------------------------------------------------------------------------
14 PsiBlast_PDB 61.0926% -19 - C1 - - 1G6H LIVG_METJA A:[5-239] ---------MEILRTENIVKYF-GE----FKALDGVSISVNKGDVTLIIGPNGSGKSTLINVITGFLKADEGRVYFENKDI---TN--K--EPA------E-----LY-HYG---IVRTFQTPQP-LKEMTV-------------------LENLLI---G---------EICPGESPLNSLFYK---K---WIPKEEEM------V---------E----KAFKILEFLKLS-------------HLYDRKAGELSGGQMKLVEIGRALMTNPKMIVMDEPIAGVAPGLAHDIFNHVLELK-A-KG-I-TFLIIEHRLDIVLNYIDHLYVMFNGQIIAEGRGEE--------------------------------------------------------------------------------------------------------------------------------
33 HHSearch 60.6123% -44 - C1 - - 2AWN MALK_ECOLI B:[2-223] ----------ASVQLQNVTKAW-GE----VVVSKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLETITSGDLF-----I---GE--K--RMN------DTP---PA-ERG---VGMVFQSYAL-YPHLSV-------------------AENMSF---G---------LK----------LAG---AKKEV------I------N---------Q----RVNQVAEVLQLAHL-----------L--DRKPKALSGGQRQRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLH-KRLG-R-TMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLEL--Y--H-------------------------------------------------------------------------------------------------------------------------
2 PsiBlast_PDB 58.7828% -9 - C1 - - 1VPL - ? A:[14-251] ----------GAVVVKDLRKRI-GK----KEILKGISFEIEEGEIFGLIGPNGAGKTTTLRIISTLIKPSSGIVT-----VFGKNV--V--EEP------H-----EV-RKL---ISYLPEEAGA-YRNMQG-------------------IEYLRF---V---------AG----------FYA---S---S------SSEIEEMV---------E----RATE-IAGLGEK-------------I--KDRVSTYSKGMVRKLLIARALMVNPRLAILDEPTSGLD-VLNAREVRKILKQA-S-QE-GLTILVSSHNMLEVEFLCDRIALIHNGTIVETGTVEELKER--YK---A-QNIEEVFEEVVK-------------------------------------------------------------------------------------------------------
3 PsiBlast_PDB 58.4328% -29 - C1 - - 5X5Y - ? B:[2-224] ----------ATLKAQHLAKSY-KG----RQVVRDVSMSIDSGQIVGLLGPNGAGKTTCFYMIVGLVQADQGVVR-----I---DE--Q--NVT------HLPMHGRA-RAG---IGYLPQEASI-FRKLSVSDNIMAILETRSDLDRNGRKEAL---------------EG----------LLQ---E---F------H------I----------------HHIRDNLGM----------------------SLSGGERRRVEIARALASAPKFILLDEPFAGVDPISVGDIKQIIHHLK-A-KG-I-GILITDHNVRETLDICETAYIVNDGQLIAEGDAESI-------------------------------------------------------------------------------------------------------------------------------
9 PsiBlast_PDB 56.6826% -27 - C1 - - 1G9X LIVG_METJA A:[5-239] ---------MEILRTENIVKYF-GE----FKALDGVSISVCKGDVTLIIGPNGSGKSTLINVITGFLKADEGRVYFENKDI---TN--K--EPA------E-----LY-HYG---IVRTFQTPQP-LKEMTV-------------------LENLLI---G---------EINPGESPLNSLFYK---K---WIPKEEEM------V---------E----KAFKILEFLKLS-------------HLYDRKAGELSGGQMKLVEIGRALMTNPKMIVMDEPIAGVAPGLAHDIFNHVLELK-A-KG-I-TFLIIEHRLDIVLNYIDHLYVMFNGQIIAEGRGEE--------------------------------------------------------------------------------------------------------------------------------
27 Fugue 56.3025% 9 - C1 - - 1Z47 - ? A:[11-355] --------GSMTIEFVGVEKIYPGG----ARSVRGVSFQIREGEMVGLLGPSGSGKTTILRLIAGLERPTKGDVW-----I---GG--KRVTDL------P-----PQ-KRN---VGLVFQNYAL-FQHMTV-------------------YDNVSFGLRE---------KR----------VPK---D---E------M------D---------A----RVRELLRFMRLE-------------SYANRFPHELSGGQQQRVALARALAPRPQVLLFDEPFAAIDTQIRRELRTFVRQVH-D-EMGV-TSVFVTHDQEEALEVADRVLVLHEGNVEQFGTPEEV--YEKPG---TLFVASFIGESNVWTRAVQNGRIEVAGAALPVDPAVSEGSEVAVVVRPKDVELQPASEREAHAQVVRSAFKGSYSACWIRTKDGEVWEVHVPSADRHRWSPGAWVHMNVTRWFIFPR
42 HHSearch 54.4325% -5 - C1 - - 4PL0 MCJD_ECOLX B:[342-569] ---------KLNLSIRELSFSY-SDD---KKILNSVSLDLFTGKMYSLTGPSGSGKSTLVKIISGYYKNYFGDIY-----L---ND--I--SLR------NISDE-DL-NDA---IYYLTQDDYI-FM-DTL-------------------RFNLRL---A---------NY----------D---------A------S------E---------N----EIFKVLKLANLSVVNNEPVSLDTH-L--INRGNNYSGGQKQRISLARLFLRKPAIIIIDEATSALDYINESEILSSIRTHF---PD-A-LIINISHRINLLE-CSDCVYVLNEGNIVASGHFRDL--M--VS---N--------------------------------------------------------------------------------------------------------------------
39 HHSearch 54.2725% -29 - C1 - - 5MKK - ? B:[335-563] ---------SGEVRFEGVGLKR-DG----RWLLRGLTLTIPEGMTLGITGRTGSGKSLLAALVPRLLDPSEGRVY-----V---GG--H--EARRIPL--A-----VL-RKA---VGVAPQEPFL-FS-ETI-------------------LENIAF---G---------LD----------EV---------------D------R---------E----RVEWAARLAGIHEEILAFPKGYETVL--GERGITLSGGQRQRVALARALAKRPKILILDDALSAVDAETEARILQGLKTVL-G--K-Q-TTLLISHRTAALR-HADWIIVLDGGRIVEEGTHESL--L--QA---GG-------------------------------------------------------------------------------------------------------------------
22 Fugue 54.2624% -6 - C1 - - 3TUZ METN_ECOLI H:[23-362] ----------HMIKLSNITKVF-HQGTRTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTEGSVL-----V---DG--Q--ELT------T-----LS-ESE---LTKARRQIGMIFQHFNL-------------------LSSRTV---F---------GN----------VAL---P---L------E------LDNTPKDEVKR----RVTELLSLVGLGDK-----------H--DSYPSNLSGGQKQRVAIARALASNPKVLLCDQATSALDPATTRSILELLKDIN-R-RL-GLTILLITHEMDVVKRICDCVAVISNGELIEQDTVSEV--F--SH---PKTPLAQKFIQSTLHLDIPEDYQERLQAEPFTDCVPMLRLEFTGQSVDAPLLSETARRFNVNNNIISAQMDYAGGVKFGIMLTEMHGTQQDTQAAIAWLQEHHVKVEV---------
43 HHSearch 53.9825% -6 - C1 - - 5EG1 MCJD_ECOLX B:[342-569] ---------KLNLSIRELSFSY-SDD---KKILNSVSLDLFTGKMYSLTGPSGSGKSTLVKIISGYYKNYFGDIY-----L---ND--I--SLR------NISDE-DL-NDA---IYYLTQDDYI-FM-DTL-------------------RFNLRL---A---------NY----------D---------A------S------E---------N----EIFKVLKLANLSVVNNEPVSLDTH-L--INRGNNYSGGQKQRISLARLFLRKPAIIIIDEATSALDYINESEILSSIRTHF---PD-A-LIINISHRINLLE-CSDCVYVLNEGNIVASGHFRDL--M--VS---N--------------------------------------------------------------------------------------------------------------------
49 HHSearch 51.9824% -36 - C1 - - 2YYZ ? A:[2-224] ----------PSIRVVNLKKYF-GK----VKAVDGVSFEVKDGEFVALLGPSGCGKTTTLLMLAGIYKPTSGEIY-----F---DD--V--LVN------DIP---PK-YRE---VGMVFQNYAL-YPHMTV-------------------FENIAF---P---------LR----------ARR---ISKDE------V------E---------K----RVVEIARKLLIDNL-----------L--DRKPTQLSGGQQQRVALARALVKQPKVLLFDEPLSNLDANLRMIMRAEIKHLQ-QELG-I-TSVYVTHDQAEAMTMASRIAVFNQGKLVQYGTPDEV--Y--DS------------------------------------------------------------------------------------------------------------------------