@TOME V2.3
(Mar 2018)
Ref.
-
-
Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
Show Ligands of Templates
Complexes Affinity Score
Main Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Complexes Tab
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : spr2021: (2018-01-25 )
MKKKILASLLLSTVMVSQVAVLTTAHAETTDDKIAAQDNKISNLTAQQQEAQKQVDQIQEQVSAIQAEQSNLQAENDRLQAESKKLEGEITELSKNIVSRNQSLEKQARSAQTNGAVTSYINTIVNSKSITEAISRVAAMSEIVSANNKMLEQQKADKKAISEKQVANNDAINTVIANQQKLADDAQALTTKQAELKAAELSLAAEKATAEGEKASLLEQKAAAEAEARAAAVAEAAYKEKRASQQQSVLASANTNLTAQVQAVSESAAAPVRAKVRPTYSTNASSYPIGECTWGVKTLAPWAGDYWGNGAQWATSAAAAGFRTGSTPQVGAIACWNDGGYGHVAVVTAVESTTRIQVSESNYAGNRTIGNHRGWFNPTTTSEGFVTYIYAD
Atome Classification :
(20 SA)
.........10........20........30........40........50........60........70........80........90........100.......110.......120.......130.......140.....---..150.......160.......170.......180.......190.......200.......210.......220.......230.......240.......250.......260.......270.......280.--......290....-...300----.-.----...----...310.......320....-----...330.....------.------.---340.......350.......360...-----....370.......380.......390
(Atome)
(Ident)
(Tito)
(Num)
(QMean)
(Ligand)
(Uniprot)
M
K
K
K
I
L
A
S
L
L
L
S
T
V
M
V
S
Q
V
A
V
L
T
TAHAETTDDKIAAQDNKI
S
N
L
T
A
Q
Q
Q
E
A
Q
K
Q
V
D
Q
I
Q
E
Q
V
S
A
I
Q
A
E
Q
SNLQAE
N
D
R
L
Q
A
E
S
K
K
LE
G
E
I
T
E
L
S
K
N
I
V
SR
N
Q
S
L
E
K
Q
A
R
SAQTN
G
A
V
T
S
Y
I
N
T
I
VN
S
K
S
I
T
E
A
I
S
R
V
A
A
M
S
E
I
V
S
A
N
---
N
K
M
L
E
Q
Q
KA
D
K
K
AI
S
E
KQVANNDA
I
N
T
V
I
A
N
Q
Q
K
L
A
D
D
A
Q
A
L
T
T
K
Q
A
E
L
K
A
A
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L
S
LAAEKATAEG
E
K
A
S
L
L
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Q
K
A
A
A
E
A
E
A
R
A
A
A
V
A
E
A
A
Y
K
E
K
R
A
S
Q
Q
Q
S
V
L
ASANT
N
L
T
A
Q
V
Q
AVSESAAAP
V
R
A
K
V
R
PTYSTN--ASSYPIGECTWGV-KTLAP-----W-A----GDY----WGNG
A
Q
W
A
T
S
A
AAAGFRTGS-----TP
Q
V
G
A
I
A
C
WN------D------G---GY
G
H
V
A
V
V
T
A
VE
S
T
T
R
I
Q
V
SESNYAG-----NRTIGNHRGWFNPTTTSE
G
F
V
T
Y
I
YAD
35
Fugue
85.05
100%
-24
- C1 -
-
4CGK
2
?
A:
[42-392]
-----------------------------------------
S
N
L
T
A
Q
Q
Q
E
A
Q
K
Q
V
D
Q
I
Q
E
Q
V
S
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N
L
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L
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Y
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A
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A
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A
N
---
N
K
M
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Q
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K
K
A
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A
N
N
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A
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T
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I
A
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Q
Q
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L
A
D
D
A
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T
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L
K
A
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L
A
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A
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A
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L
L
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K
A
A
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A
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A
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A
A
Y
K
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A
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L
A
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A
N
T
N
L
T
A
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Q
A
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S
A
A
A
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A
K
V
R
P
T
Y
S
T
N
--
A
S
S
Y
P
I
G
E
C
T
W
G
V
-
K
T
L
A
P
-----
W
-
A
----
G
D
Y
----
W
G
N
G
A
Q
W
A
T
S
A
A
A
A
G
F
R
T
G
S
-----
T
P
Q
V
G
A
I
A
C
W
N
------
D
------
G
---
G
Y
G
H
V
A
V
V
T
A
V
E
S
T
T
R
I
Q
V
S
E
S
N
Y
A
G
-----
N
R
T
I
G
N
H
R
G
W
F
N
P
T
T
T
S
E
G
F
V
T
Y
I
Y
A
D
10
HHSearch
84.58
100%
-24
- C1 -
-
4CGK
2
?
A:
[42-392]
-----------------------------------------
S
N
L
T
A
Q
Q
Q
E
A
Q
K
Q
V
D
Q
I
Q
E
Q
V
S
A
I
Q
A
E
Q
S
N
L
Q
A
E
N
D
R
L
Q
A
E
S
K
K
L
E
G
E
I
T
E
L
S
K
N
I
V
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R
N
Q
S
L
E
K
Q
A
R
S
A
Q
T
N
G
A
V
T
S
Y
I
N
T
I
V
N
S
K
S
I
T
E
A
I
S
R
V
A
A
M
S
E
I
V
S
A
N
---
N
K
M
L
E
Q
Q
K
A
D
K
K
A
I
S
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K
Q
V
A
N
N
D
A
I
N
T
V
I
A
N
Q
Q
K
L
A
D
D
A
Q
A
L
T
T
K
Q
A
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L
K
A
A
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L
S
L
A
A
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K
A
T
A
E
G
E
K
A
S
L
L
E
Q
K
A
A
A
E
A
E
A
R
A
A
A
V
A
E
A
A
Y
K
E
K
R
A
S
Q
Q
Q
S
V
L
A
S
A
N
T
N
L
T
A
Q
V
Q
A
V
S
E
S
A
A
A
P
V
R
A
K
V
R
P
T
Y
S
T
N
--
A
S
S
Y
P
I
G
E
C
T
W
G
V
-
K
T
L
A
P
-----
W
-
A
----
G
D
Y
----
W
G
N
G
A
Q
W
A
T
S
A
A
A
A
G
F
R
T
G
S
-----
T
P
Q
V
G
A
I
A
C
W
N
------
D
------
G
---
G
Y
G
H
V
A
V
V
T
A
V
E
S
T
T
R
I
Q
V
S
E
S
N
Y
A
G
-----
N
R
T
I
G
N
H
R
G
W
F
N
P
T
T
T
S
E
G
F
V
T
Y
I
Y
A
D
1
PsiBlast_PDB
84.06
100%
-24
- C1 -
-
4CGK
2
?
A:
[42-392]
-----------------------------------------
S
N
L
T
A
Q
Q
Q
E
A
Q
K
Q
V
D
Q
I
Q
E
Q
V
S
A
I
Q
A
E
Q
S
N
L
Q
A
E
N
D
R
L
Q
A
E
S
K
K
L
E
G
E
I
T
E
L
S
K
N
I
V
S
R
N
Q
S
L
E
K
Q
A
R
S
A
Q
T
N
G
A
V
T
S
Y
I
N
T
I
V
N
S
K
S
I
T
E
A
I
S
R
V
A
A
M
S
E
I
V
S
A
N
---
N
K
M
L
E
Q
Q
K
A
D
K
K
A
I
S
E
K
Q
V
A
N
N
D
A
I
N
T
V
I
A
N
Q
Q
K
L
A
D
D
A
Q
A
L
T
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Q
A
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L
K
A
A
E
L
S
L
A
A
E
K
A
T
A
E
G
E
K
A
S
L
L
E
Q
K
A
A
A
E
A
E
A
R
A
A
A
V
A
E
A
A
Y
K
E
K
R
A
S
Q
Q
Q
S
V
L
A
S
A
N
T
N
L
T
A
Q
V
Q
A
V
S
E
S
A
A
A
P
V
R
A
K
V
R
P
T
Y
S
T
N
--
A
S
S
Y
P
I
G
E
C
T
W
G
V
-
K
T
L
A
P
-----
W
-
A
----
G
D
Y
----
W
G
N
G
A
Q
W
A
T
S
A
A
A
A
G
F
R
T
G
S
-----
T
P
Q
V
G
A
I
A
C
W
N
------
D
------
G
---
G
Y
G
H
V
A
V
V
T
A
V
E
S
T
T
R
I
Q
V
S
E
S
N
Y
A
G
-----
N
R
T
I
G
N
H
R
G
W
F
N
P
T
T
T
S
E
G
F
V
T
Y
I
Y
A
D
9
HHSearch
83.56
100%
-23
- C1 -
-
4CGK
1
?
B:
[45-392]
--------------------------------------------
T
A
Q
Q
Q
E
A
Q
K
Q
V
D
Q
I
Q
E
Q
V
S
A
I
Q
A
E
Q
S
N
L
Q
A
E
N
D
R
L
Q
A
E
S
K
K
L
E
G
E
I
T
E
L
S
K
N
I
V
S
R
N
Q
S
L
E
K
Q
A
R
S
A
Q
T
N
G
A
V
T
S
Y
I
N
T
I
V
N
S
K
S
I
T
E
A
I
S
R
V
A
A
M
S
E
I
V
S
A
N
---
N
K
M
L
E
Q
Q
K
A
D
K
K
A
I
S
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K
Q
V
A
N
N
D
A
I
N
T
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I
A
N
Q
Q
K
L
A
D
D
A
Q
A
L
T
T
K
Q
A
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L
K
A
A
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L
S
L
A
A
E
K
A
T
A
E
G
E
K
A
S
L
L
E
Q
K
A
A
A
E
A
E
A
R
A
A
A
V
A
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A
A
Y
K
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K
R
A
S
Q
Q
Q
S
V
L
A
S
A
N
T
N
L
T
A
Q
V
Q
A
V
S
E
S
A
A
A
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R
A
K
V
R
P
T
Y
S
T
N
--
A
S
S
Y
P
I
G
E
C
T
W
G
V
-
K
T
L
A
P
-----
W
-
A
----
G
D
Y
----
W
G
N
G
A
Q
W
A
T
S
A
A
A
A
G
F
R
T
G
S
-----
T
P
Q
V
G
A
I
A
C
W
N
------
D
------
G
---
G
Y
G
H
V
A
V
V
T
A
V
E
S
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R
I
Q
V
S
E
S
N
Y
A
G
-----
N
R
T
I
G
N
H
R
G
W
F
N
P
T
T
T
S
E
G
F
V
T
Y
I
Y
A
D
8
PsiBlast_CBE
83.56
100%
-23
- C1 -
-
4CGK
1
?
B:
[45-392]
--------------------------------------------
T
A
Q
Q
Q
E
A
Q
K
Q
V
D
Q
I
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E
Q
V
S
A
I
Q
A
E
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N
L
Q
A
E
N
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R
L
Q
A
E
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K
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E
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E
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E
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A
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Y
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I
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K
S
I
T
E
A
I
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R
V
A
A
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E
I
V
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A
N
---
N
K
M
L
E
Q
Q
K
A
D
K
K
A
I
S
E
K
Q
V
A
N
N
D
A
I
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I
A
N
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Q
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L
A
D
D
A
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A
L
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A
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L
K
A
A
E
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A
A
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A
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A
E
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E
K
A
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Q
K
A
A
A
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A
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A
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A
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A
E
A
A
Y
K
E
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Q
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A
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A
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A
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E
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R
P
T
Y
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--
A
S
S
Y
P
I
G
E
C
T
W
G
V
-
K
T
L
A
P
-----
W
-
A
----
G
D
Y
----
W
G
N
G
A
Q
W
A
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A
A
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A
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G
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-----
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P
Q
V
G
A
I
A
C
W
N
------
D
------
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---
G
Y
G
H
V
A
V
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T
A
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E
S
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E
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N
Y
A
G
-----
N
R
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F
N
P
T
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A
D
44
Fugue
43.11
27%
-118
* C1 *
-
3HE5
-
?
A:
[0-46]
---------------------------------------------------
S
N
L
V
A
Q
L
E
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E
V
A
S
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N
E
T
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L
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D
L
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A
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L
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K
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I
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N
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R
K
K
I
E
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
16
HHSearch
37.84
26%
-1
- C1 -
-
5T1Q
-
?
A:
[232-359]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
S
S
D
E
F
K
P
F
R
E
V
S
D
S
M
P
Y
P
H
G
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C
T
W
Y
V
-
Y
N
R
M
K
-----
Q
-
F
G
T
S
I
S
G
D
----
L
G
D
A
H
N
W
N
N
R
A
Q
Y
R
D
Y
Q
V
S
H
-----
T
P
K
R
H
A
A
V
V
F
E
------
A
GQFGAD
Q
---
H
Y
G
H
V
A
F
V
E
K
V
N
S
D
G
S
I
V
I
S
E
S
N
V
K
G
-----
L
G
I
I
S
----
H
R
T
I
N
A
A
A
A
E
E
L
S
Y
I
T
G
K
6
PsiBlast_PDB
37.03
48%
-131
- C2 -
-
5D76
-
?
A:
[128-165]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Y
G
H
V
V
I
V
E
A
V
D
G
-
D
R
L
T
I
L
E
Q
N
Y
G
G
-----
K
R
-------------------------
4
PsiBlast_PDB
36.45
39%
-13
- C1 -
-
2LRJ
-
?
A:
[3-90]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
S
I
S
H
S
--
G
N
L
Y
T
A
G
Q
C
T
W
Y
V
Y
D
K
V
G
G
-----
E
-
I
----
G
S
T
----
W
G
N
A
N
N
W
A
A
A
A
Q
G
A
G
F
T
V
N
H
-----
T
P
S
K
G
A
I
L
Q
S
S
------
E
------
G
---
P
F
G
H
V
A
Y
V
E
S
V
N
S
D
G
S
V
T
I
S
E
M
N
Y
S
G
--------------------------------
3
PsiBlast_PDB
36.44
31%
-2
- C1 -
-
5T1Q
-
?
A:
[243-345]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
S
D
--
S
M
P
Y
P
H
G
Q
C
T
W
Y
V
-
Y
N
R
M
K
Q
F
G
T
S
I
-
S
----
G
D
-----
L
G
D
A
H
N
W
N
N
R
A
Q
Y
R
D
Y
Q
V
S
H
-----
T
P
K
R
H
A
A
V
V
F
E
AGQFGA
D
------
Q
---
H
Y
G
H
V
A
F
V
E
K
V
N
S
D
G
S
I
V
I
S
E
S
N
V
K
G
LG
I
I
S
H
R
T
I
-----------------------
5
PsiBlast_PDB
35.34
48%
-127
* C2 *
-
5D74
-
?
A:
[128-165]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Y
G
H
V
V
I
V
E
A
V
D
G
-
D
R
L
T
I
L
E
Q
N
Y
G
G
-----
K
R
-------------------------
43
Fugue
35.25
17%
3
- C1 -
-
4OLK
1
?
A:
[4-167]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
A
K
T
Q
A
E
I
N
K
R
L
D
A
Y
A
K
G
T
V
D
S
P
Y
R
I
K
K
A
T
S
Y
D
P
S
F
G
V
M
E
A
G
A
I
D
--
A
D
G
Y
Y
H
A
Q
C
Q
D
L
I
-
T
D
Y
V
L
-----
W
-
L
----
T
D
N
K
V
R
T
W
G
N
A
K
D
Q
I
K
Q
S
Y
G
T
G
F
K
I
H
E
N
K
PS
T
V
P
K
K
G
W
I
A
V
F
T
------
S
------
G
SYQ
Q
W
G
H
I
G
I
V
Y
D
G
G
N
T
S
T
F
T
I
L
E
Q
N
W
N
G
-----
Y
-
A
N
K
K
P
T
K
R
V
D
N
Y
Y
G
L
T
H
F
I
E
I
P
V
K
-
17
HHSearch
35.16
42%
-27
- C1 -
-
2LRJ
-
?
A:
[9-90]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
N
L
Y
T
A
G
Q
C
T
W
Y
V
-
Y
D
K
V
G
-----
G
E
I
----
G
S
T
----
W
G
N
A
N
N
W
A
A
A
A
Q
G
A
G
F
T
V
N
H
-----
T
P
S
K
G
A
I
L
Q
S
S
------
E
------
G
---
P
F
G
H
V
A
Y
V
E
S
V
N
S
D
G
S
V
T
I
S
E
M
N
Y
S
G
--------------------------------
2
PsiBlast_PDB
33.81
42%
-12
- C1 -
-
2K3A
-
?
A:
[49-131]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
A
N
L
Y
T
A
G
Q
C
T
W
Y
V
Y
D
K
V
G
G
-----
N
-
I
----
G
S
T
----
W
G
N
A
N
N
W
A
S
A
A
S
S
A
G
Y
T
V
N
N
-----
S
P
E
A
G
S
I
L
Q
S
T
------
A
------
G
---
G
Y
G
H
V
A
Y
V
E
N
V
N
S
D
G
S
V
E
V
S
E
M
N
Y
N
G
--------------------------------
12
HHSearch
33.60
33%
-8
- C1 -
-
2K3A
-
?
A:
[41-155]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
T
Q
S
T
S
G
S
S
--
A
N
L
Y
T
A
G
Q
C
T
W
Y
V
-
Y
D
K
V
G
-----
G
N
I
----
G
S
T
----
W
G
N
A
N
N
W
A
S
A
A
S
S
A
G
Y
T
V
N
N
-----
S
P
E
A
G
S
I
L
Q
S
T
------
A
------
G
---
G
Y
G
H
V
A
Y
V
E
N
V
N
S
D
G
S
V
E
V
S
E
M
N
Y
N
G
-----
G
P
F
S
--
V
S
-
E
R
T
I
S
A
G
E
A
S
S
Y
N
Y
I
H
L
N
13
HHSearch
31.63
21%
82
- C1 -
-
4CGK
-
?
A:
[42-226]
------------------------------------------------
S
N
L
T
A
Q
Q
Q
E
A
Q
K
Q
V
D
Q
I
Q
E
Q
V
S
A
I
Q
A
E
Q
S
N
L
Q
A
E
N
D
R
L
Q
A
E
S
K
K
L
E
G
E
I
T
E
L
S
K
N
I
V
S
R
N
Q
S
L
E
-
K
Q
A
R
S
A
Q
T
N
G
--
A
V
T
S
Y
I
N
T
I
V
N
S
K
S
I
T
E
A
I
S
R
V
A
A
M
S
E
I
V
S
A
N
N
K
M
L
E
Q
Q
K
A
D
K
K
A
I
S
E
K
Q
V
A
N
N
D
A
I
N
T
V
I
A
N
Q
Q
K
L
A
D
D
A
Q
A
L
T
T
K
Q
A
E
L
K
A
A
E
L
S
L
A
A
E
K
A
T
A
E
G
E
K
A
S
L
L
E
Q
K
A
A
A
E
A
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
38
Fugue
31.31
15%
18
- C1 -
-
2JEE
-
ZAPB_ECOLI
A:
[3-80]
---------------------
M
S
L
E
V
F
E
K
L
E
A
K
V
Q
Q
A
I
D
T
I
T
L
L
Q
M
E
I
E
E
L
K
E
K
N
N
S
L
S
Q
E
V
Q
N
A
Q
H
Q
R
E
E
L
E
R
E
N
N
H
L
K
E
Q
Q
N
G
W
Q
E
R
L
Q
A
L
L
G
R
M
E
E
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
14
HHSearch
31.24
21%
87
- C1 -
-
4CGK
-
?
B:
[45-226]
---------------------------------------------------
T
A
Q
Q
Q
E
A
Q
K
Q
V
D
Q
I
Q
E
Q
V
S
A
I
Q
A
E
Q
S
N
L
Q
A
E
N
D
R
L
Q
A
E
S
K
K
L
E
G
E
I
T
E
L
S
K
N
I
V
S
R
N
Q
S
L
E
-
K
Q
A
R
S
A
Q
T
N
G
--
A
V
T
S
Y
I
N
T
I
V
N
S
K
S
I
T
E
A
I
S
R
V
A
A
M
S
E
I
V
S
A
N
N
K
M
L
E
Q
Q
K
A
D
K
K
A
I
S
E
K
Q
V
A
N
N
D
A
I
N
T
V
I
A
N
Q
Q
K
L
A
D
D
A
Q
A
L
T
T
K
Q
A
E
L
K
A
A
E
L
S
L
A
A
E
K
A
T
A
E
G
E
K
A
S
L
L
E
Q
K
A
A
A
E
A
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
42
Fugue
29.76
11%
-2
- C1 -
-
3F1I
-
H:
[1-98]
--------------------------------------------------------------------------------------------------------------------------------------------------
S
---
H
E
Q
F
L
K
A
L
Q
N
A
V
T
T
F
V
N
R
M
K
S
N
H
M
R
G
R
S
I
T
N
D
S
A
V
L
S
L
F
Q
S
I
N
G
M
H
P
Q
L
L
E
L
L
N
Q
L
D
E
R
R
L
Y
Y
E
G
L
Q
D
K
L
A
Q
I
R
D
A
R
G
A
L
S
A
L
R
E
E
H
R
E
K
L
R
R
A
A
E
E
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
41
Fugue
28.82
16%
28
- C1 -
-
3T97
-
NUP62_RAT
A:
[364-419]
-----------------------------
W
D
R
T
L
I
E
N
G
E
K
I
T
S
L
H
R
E
V
E
K
V
K
L
D
Q
K
R
L
D
Q
E
L
D
F
I
L
S
Q
Q
K
E
L
E
D
L
L
S
P
L
E
E
S
V
K
E
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------