@TOME V2.3
(Mar 2018)

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3D Common Core:

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Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : B0VKB4: (2017-10-25 )
MAEFKFTDLVEPVAVDKKTALRITVLGGGSFGTAMANLAARNGCDTMIWIRDAETAEEINKTHINKRYLPDFTLESSLRAVSDLEQAVCDRDIILVAIPSHSFRDVLKQIAPYITAQAVVSLTKGIEAKTFSFMSDIIREELPEVPYGVLSGPNLAKEIMAGMPSGTVIASDSELVRYAVQHALHSALFRVFGSDDVHGVELGGALKNIYAVAMGIGAAYKIGENTKSMILTRALAEMSRFAVKQGANPLTFLGLSGVGDLFATCNSPLSRNYQIGYALGSGKTLEQASKELGQTAEGINTIVQVRGKAQELDVYMPITNALYEVIFEGAPPLNIALSLMKNGHRSDVEFVLPHHEV

Atome Classification :

(20 SA) .........10........20........30........40.-------..--------.---------....50..-----..-----....60........70........80........90........100.......110..------.-...------.-120-.....--.--.130-........140.......150.......160.......170------....---------.....180..-...--..190.......200.......210.......220.......230.......240---.....--..250.-......260.......270..-..--------------.-----..280---------..----.......290--...--....300.....--..310..--.--....320.......330.......340.......350.....
(Atome) (Ident) (Tito) (Num) (QMean) (Ligand) (Uniprot) MAEFKFTDLVEPVAVDKKTALRITVLGGGSFGTAMANLAARN-------GC--------D---------TMIWIRDA-----ET-----AEEINKTHINKRYLPDFTLESSLRAVSDLEQAVCDRDIILVAIPSHSFRDVLKQIAPYI------T-AQA------V-VSL-TKGIE--A--KTF--SFMSDIIREELPEVPYGVLSGPNLAKEIMAGMPSGTVIA--------SDSE---------LVRYAVQHAL-HSA--LFRVFGSDDVHGVELGGALKNIYAVAMGIGAAYKIGENTKSMILTRALAEMSRFA---VKQGA--NPLTFL-GLSGVGDLFATCNSPLSRNYQ-IG--------------Y-----ALG-----------SG----KTLEQASKEL--GQT--AEGINTIVQVRG--KAQELDV--Y--MPITNALYEVIFEGAPPLNIALSLMKNGHRSDVEFVLPHHEV
1 PsiBlast_PDB 87.6434% -65 * C2 * - 3K96 GPDA_COXBU A:[32-352] ----------------------IAILGAGSWGTALALVLARK-------GQ--------K---------VRLWSYES-----DH-----VDEMQAEGVNNRYLPNYPFPETLKAYCDLKASLEGVTDILIVVPSFAFHEVITRMKPLI------D-AKT------R-IAWGTKGL---A--KGS--RLLHEVVATELGQVPMAVISGPSLATEVAANLPTAVSLA--------SNNS---------QFSKDLIERL-HGQ--RFRVYKNDDMIGVELCGSVKNILAIATGISDGLKLGSNARAALITRGLTEMGRLV---SVFGG--KQETLT-GLAGLGDLVLTCTDNQSRNRR-FG--------------L-----ALG-----------EG----VDKKEAQQAI--GQA--IEGLYNTDQVHA--LAQKHAI--E--MPLTFQVHRILHEDLDPQQAVQELLERS--------------
21 PsiBlast_CBE 85.9134% -67 - C2 - - 3K96 GPDA_COXBU B:[32-351] ----------------------IAILGAGSWGTALALVLARK-------GQ--------K---------VRLWSYES-----DH-----VDEMQAEGVNNRYLPNYPFPETLKAYCDLKASLEGVTDILIVVPSFAFHEVITRMKPLI------D-AKT------R-IAWGTKGL---A--KGS--RLLHEVVATELGQVPMAVISGPSLATEVAANLPTAVSLA--------SNNS---------QFSKDLIERL-HGQ--RFRVYKNDDMIGVELCGSVKNILAIATGISDGLKLGSNARAALITRGLTEMGRLV---SVFGG--KQETLT-GLAGLGDLVLTCTDNQSRNRR-FG--------------L-----ALG-----------EG----VDKKEAQQAI--GQA--IEGLYNTDQVHA--LAQKHAI--E--MPLTFQVHRILHEDLDPQQAVQELLER---------------
61 HHSearch 82.7731% -59 - C2 - - 3K96 GPDA_COXBU A:[27-352] -----------------PFKHPIAILGAGSWGTALALVLARK-------GQ--------K---------VRLWSYES-----DH-----VDEMQAEGVNNRYLPNYPFPETLKAYCDLKASLEGVTDILIVVPSFAFHEVITRMKPLI------DAKTR------I-AWG-TKGLA--K--GSR---LLHEVVATELGQVPMAVISGPSLATEVAANLPTAVSLA--------SNNS---------QFSKDLIERL-HGQ--RFRVYKNDDMIGVELCGSVKNILAIATGISDGLKLGSNARAALITRGLTEMGRLV---SVFGG--KQETLT-GLAGLGDLVLTCTDNQSRNRRFGL--------------ALGEGVDKKEAQQA------IG----QAIE-------------GLYN--TDQVHA--LAQKHAI--E--MPLTFQVHRILHEDLDPQQAVQELLERS--------------
76 Fugue 80.6529% -50 - C2 - - 1EVY GPDA_LEIME A:[9-357] -------------KDELLYLNKAVVFGSGAFGTALAMVLSKK-------CR--------E---------VCVWHMNE-----EE-----VRLVNEKRENVLFLKGVQLASNITFTSDVEKAYNGAEIILFVIPTQFLRGFFEKSGGNL------I-AYAKEKQVPV-LVC-TKGIE--R--STL--KFPAEIIGEFLPSPLLSVLAGPSFAIEVATGVFTCVSIA--------SADI---------NVARRLQRIM-STGDRSFVCWATTDTVGCEVASAVKNVLAIGSGVANGLGMGLNARAALIMRGLLEIRDLT---AALGG--DGSAVF-GLAGLGDLQLTCSSELSRNFT-VG--------------K-----KLG-----------KG----LPIEEIQ-----RAV--AEGVATADPLMR--LAKQLKV--K--MPLCHQIYEIVYKKKNPRDALADLLSCGLQDEGLPPLFK---
14 PsiBlast_PDB 79.9029% - - C2 - - 4FGW - GPD1_YEAST A:[35-379] --------------------FKVTVIGSGNWGTTIAKVVAEN--------C--------KGYPEVFAPIVQMWVFEE-----EINGEKLTEIINTRHQNVKYLPGITLPDNLVANPDLIDSVKDVDIIVFNIPHQFLPRICSQLKGHV------D-SHVR-----A-ISC-LKGFEVGA--KGV--QLLSSYITEELG-IQCGALSGANIATEVAQEHWSETTVAYHIPKDFRGEGK---------DVDHKVLKALFHRP--YFHVSVIEDVAGISICGALKNVVALGCGFVEGLGWGNNASAAIQRVGLGEIIRFGQMFFPESR--EETYYQ-ESAGVADLITTCAG--GRNVK-VA--------------R-----LMAT----------SG----KDAWECEKELLNGQS--AQGLITCKEVHE--WLETCGS--VEDFPLFEAVYQIVYNNYPMKNL----------------------
63 HHSearch 79.8337% -97 - C2 - - 1Z82 ? A:[14-325] -------------------EMRFFVLGAGSWGTVFAQMLHEN-------GE--------E---------VILWARRK-----EI-----VDLINVSHTSP-YVEES--KITVRATNDLEE-IKKEDILVIAIPVQYIREHLLRLPV--------K-PSM------V-LNL-SKGIE--I--KTG--KRVSEIVEEILG-CPYAVLSGPSHAEEVAKKLPTAVTLA--------GENS------------KELQKRI-STE--YFRVYTCEDVVGVEIAGALKNVIAIAAGILDGFGGWDNAKAALETRGIYEIARFG---MFFGA--DQKTFM-GLAGIGDLMVTCNSRYSRNRR-FG--------------E-----LIARGFNPLKLLESSN----QVVE---------------GAFTVKAVMK--IAKENKI--D--MPISEEVYRVVYEGKPPLQSMRDLMR----------------
62 HHSearch 79.6131% -59 - C2 - - 3K96 GPDA_COXBU B:[27-351] -----------------PFKHPIAILGAGSWGTALALVLARK-------GQ--------K---------VRLWSYES-----DH-----VDEMQAEGVNNRYLPNYPFPETLKAYCDLKASLEGVTDILIVVPSFAFHEVITRMKPLI------DAKTR------I-AWG-TKGLA--K--GSR---LLHEVVATELGQVPMAVISGPSLATEVAANLPTAVSLA--------SNNS---------QFSKDLIERL-HGQ--RFRVYKNDDMIGVELCGSVKNILAIATGISDGLKLGSNARAALITRGLTEMGRLV---SVFGG--KQETLT-GLAGLGDLVLTCTDNQSRNRRFGL--------------ALGEGVDKKEAQQA------IG----QAIE-------------GLYN--TDQVHA--LAQKHAI--E--MPLTFQVHRILHEDLDPQQAVQELLER---------------
6 PsiBlast_PDB 79.1429% -50 - C2 - - 1M66 GPDA_LEIME A:[17-350] ---------------------KAVVFGSGAFGTALAMVLSKK-------CR--------E---------VCVWHMNE-----EE-----VRLVNEKRENVLFLKGVQLASNITFTSDVEKAYNGAEIILFVIPTQFLRGFFEKSGGNL------I-AYAKEKQVPV-LVC-TKGIE--R--STL--KFPAEIIGEFLPSPLLSVLAGPSFAIEVATGVFTCVSIA--------SADI---------NVARRLQRIM-STGDRSFVCWATTDTVGCEVASAVKNVLAIGSGVANGLGMGLNARAALIMRGLLEIRDLT---AALGG--DGSAVF-GLAGLGDLQLTCSSELSRNFT-VG--------------K-----KLG-----------KG----LPIEEIQR-----AV--AEGVATADPLMR--LAKQLKV--K--MPLCHQIYEIVYKKKNPRDALADLLSCGLQDE----------
4 PsiBlast_PDB 78.9229% -52 - C2 - - 1EVZ GPDA_LEIME A:[17-350] ---------------------KAVVFGSGAFGTALAMVLSKK-------CR--------E---------VCVWHMNE-----EE-----VRLVNEKRENVLFLKGVQLASNITFTSDVEKAYNGAEIILFVIPTQFLRGFFEKSGGNL------I-AYAKEKQVPV-LVC-TKGIE--R--STL--KFPAEIIGEFLPSPLLSVLAGPSFAIEVATGVFTCVSIA--------SADI---------NVARRLQRIM-STGDRSFVCWATTDTVGCEVASAVKNVLAIGSGVANGLGMGLNARAALIMRGLLEIRDLT---AALGG--DGSAVF-GLAGLGDLQLTCSSELSRNFT-VG--------------K-----KLG-----------KG----LPIEEIQR-----AV--AEGVATADPLMR--LAKQLKV--K--MPLCHQIYEIVYKKKNPRDALADLLSCGLQDE----------
3 PsiBlast_PDB 78.9129% -51 - C2 - - 1EVY GPDA_LEIME A:[17-350] ---------------------KAVVFGSGAFGTALAMVLSKK-------CR--------E---------VCVWHMNE-----EE-----VRLVNEKRENVLFLKGVQLASNITFTSDVEKAYNGAEIILFVIPTQFLRGFFEKSGGNL------I-AYAKEKQVPV-LVC-TKGIE--R--STL--KFPAEIIGEFLPSPLLSVLAGPSFAIEVATGVFTCVSIA--------SADI---------NVARRLQRIM-STGDRSFVCWATTDTVGCEVASAVKNVLAIGSGVANGLGMGLNARAALIMRGLLEIRDLT---AALGG--DGSAVF-GLAGLGDLQLTCSSELSRNFT-VG--------------K-----KLG-----------KG----LPIEEIQR-----AV--AEGVATADPLMR--LAKQLKV--K--MPLCHQIYEIVYKKKNPRDALADLLSCGLQDE----------
9 PsiBlast_PDB 78.4329% -51 - C2 - - 1N1G GPDA_LEIME A:[17-350] ---------------------KAVVFGSGAFGTALAMVLSKK-------CR--------E---------VCVWHMNE-----EE-----VRLVNEKRENVLFLKGVQLASNITFTSDVEKAYNGAEIILFVIPTQFLRGFFEKSGGNL------I-AYAKEKQVPV-LVC-TKGIE--R--STL--KFPAEIIGEFLPSPLLSVLAGPSFAIEVATGVFTCVSIA--------SADI---------NVARRLQRIM-STGDRSFVCWATTDTVGCEVASAVKNVLAIGSGVANGLGMGLNARAALIMRGLLEIRDLT---AALGG--DGSAVF-GLAGLGDLQLTCSSELSRNFT-VG--------------K-----KLG-----------KG----LPIEEIQR-----AV--AEGVATADPLMR--LAKQLKV--K--MPLCHQIYEIVYKKKNPRDALADLLSCGLQDE----------
5 PsiBlast_PDB 78.3829% -51 - C2 - - 1JDJ GPDA_LEIME A:[17-350] ---------------------KAVVFGSGAFGTALAMVLSKK-------CR--------E---------VCVWHMNE-----EE-----VRLVNEKRENVLFLKGVQLASNITFTSDVEKAYNGAEIILFVIPTQFLRGFFEKSGGNL------I-AYAKEKQVPV-LVC-TKGIE--R--STL--KFPAEIIGEFLPSPLLSVLAGPSFAIEVATGVFTCVSIA--------SADI---------NVARRLQRIM-STGDRSFVCWATTDTVGCEVASAVKNVLAIGSGVANGLGMGLNARAALIMRGLLEIRDLT---AALGG--DGSAVF-GLAGLGDLQLTCSSELSRNFT-VG--------------K-----KLG-----------KG----LPIEEIQR-----AV--AEGVATADPLMR--LAKQLKV--K--MPLCHQIYEIVYKKKNPRDALADLLSCGLQDE----------
56 HHSearch 78.3028% -41 - C2 - - 1N1E GPDA_LEIME B:[9-356] -------------KDELLYLNKAVVFGSGAFGTALAMVLSKK-------CR--------E---------VCVWHMNE-----EE-----VRLVNEKRENVLFLKGVQLASNITFTSDVEKAYNGAEIILFVIPTQFLRGFFEKSGGNLIAYAKEK-QVP------V-LVC-TKGIE--R--STL--KFPAEIIGEFLPSPLLSVLAGPSFAIEVATGVFTCVSIA--------SADI---------NVARRLQRIM-STGDRSFVCWATTDTVGCEVASAVKNVLAIGSGVANGLGMGLNARAALIMRGLLEIRDLT---AALGG--DGSAVF-GLAGLGDLQLTCSSELSRNFT-VG--------------K-----KLG-----------KG----LPIEEIQRTS--KAVAEGVAT--ADPLMR--LAKQLKV--K--MPLCHQIYEIVYKKKNPRDALADLLSCGLQDEGLPPLF----
57 HHSearch 78.2428% -46 - C2 - - 1EVY GPDA_LEIME A:[9-356] -------------KDELLYLNKAVVFGSGAFGTALAMVLSKK-------CR--------E---------VCVWHMNE-----EE-----VRLVNEKRENVLFLKGVQLASNITFTSDVEKAYNGAEIILFVIPTQFLRGFFEKSGGNLIAYAKEK-QVP------V-LVC-TKGIE--R--STL--KFPAEIIGEFLPSPLLSVLAGPSFAIEVATGVFTCVSIA--------SADI---------NVARRLQRIM-STGDRSFVCWATTDTVGCEVASAVKNVLAIGSGVANGLGMGLNARAALIMRGLLEIRDLT---AALGG--DGSAVF-GLAGLGDLQLTCSSELSRNFT-VG--------------K-----KLG-----------KG----LPIEEIQR-----AVAEGVAT--ADPLMR--LAKQLKV--K--MPLCHQIYEIVYKKKNPRDALADLLSCGLQDEGLPPLF----
7 PsiBlast_PDB 78.0529% -54 - C2 - - 1M67 GPDA_LEIME A:[17-350] ---------------------KAVVFGSGAFGTALAMVLSKK-------CR--------E---------VCVWHMNE-----EE-----VRLVNEKRENVLFLKGVQLASNITFTSDVEKAYNGAEIILFVIPTQFLRGFFEKSGGNL------I-AYAKEKQVPV-LVC-TKGIE--R--STL--KFPAEIIGEFLPSPLLSVLAGPSFAIEVATGVFTCVSIA--------SADI---------NVARRLQRIM-STGDRSFVCWATTDTVGCEVASAVKNVLAIGSGVANGLGMGLNARAALIMRGLLEIRDLT---AALGG--DGSAVF-GLAGLGDLQLTCSSELSRNFT-VG--------------K-----KLG-----------KG----LPIEEIQR-----AV--AEGVATADPLMR--LAKQLKV--K--MPLCHQIYEIVYKKKNPRDALADLLSCGLQDE----------
8 PsiBlast_PDB 78.0029% -44 - C2 - - 1N1E GPDA_LEIME A:[17-350] ---------------------KAVVFGSGAFGTALAMVLSKK-------CR--------E---------VCVWHMNE-----EE-----VRLVNEKRENVLFLKGVQLASNITFTSDVEKAYNGAEIILFVIPTQFLRGFFEKSGGNL------I-AYAKEKQVPV-LVC-TKGIE--R--STL--KFPAEIIGEFLPSPLLSVLAGPSFAIEVATGVFTCVSIA--------SADI---------NVARRLQRIM-STGDRSFVCWATTDTVGCEVASAVKNVLAIGSGVANGLGMGLNARAALIMRGLLEIRDLT---AALGG--DGSAVF-GLAGLGDLQLTCSSELSRNFT-VG--------------K-----KLG-----------KG----LPIEEIQRTS--KAV--AEGVATADPLMR--LAKQLKV--K--MPLCHQIYEIVYKKKNPRDALADLLSCGLQDE----------
2 PsiBlast_PDB 77.7335%-113 - C2 - - 1Z82 ? A:[16-325] ---------------------RFFVLGAGSWGTVFAQMLHEN-------GE--------E---------VILWARRK-----EI-----VDLINVSHTSP-YVEESKI--TVRATNDLEE-IKKEDILVIAIPVQYIREHLLRLP--V------K-PSM------V-LNL-SKGIE--I--KTG--KRVSEIV-EEILGCPYAVLSGPSHAEEVAKKLPTAVTLA--------GENS------------KELQKRI-STE--YFRVYTCEDVVGVEIAGALKNVIAIAAGILDGFGGWDNAKAALETRGIYEIARFG---MFFGA--DQKTFM-GLAGIGDLMVTCNSRYSRNRR-FG--------------E-----LIA-----------RGFNPLKLLESSN------QV--VEGAFTVKAVMK--IAKENKI--D--MPISEEVYRVVYEGKPPLQSMRDLMR----------------
60 HHSearch 75.1927% - - C2 - - 4FGW - GPD1_YEAST B:[33-385] ------------------KPFKVTVIGSGNWGTTIAKVVAEN-------CKGYPEVFAPI---------VQMWVFEE-----EINGEKLTEIINTRHQNVKYLPGITLPDNLVANPDLIDSVKDVDIIVFNIPHQFLPRICSQLKGHV------DSHVR------A-ISC-LKGFE--V--GAKGVQLLSSYITEELG-IQCGALSGANIATEVAQEHWSETTVA--------YHIPKDFRGEGKDVDHKVLKALF-HRP--YFHVSVIEDVAGISICGALKNVVALGCGFVEGLGWGNNASAAIQRVGLGEIIRFG---QMFFPESREETYYQESAGVADLITTCAG--GRNVK-VARLMATSGKDAWECEK-----ELL-----------NG----QSAQ-------------GLIT--CKEVHE--WLETCGSVED--FPLFEAVYQIVYNNYPMKNLPDMIEE----------------
10 PsiBlast_PDB 73.7531% -6 - C2 - - 2PLA GPD1L_HUMAN A:[6-336] --------------------LKVCIVGSGNWGSAVAKIIGNNVKKLQKFAS--------T---------VKMWVFEETVNGRKL-----TDIINNDHENVKYLPGHKLPENVVAMSNLSEAVQDADLLVFVIPHQFIHRICDEITGRV------P-KKA------LGITL-IKGID--EGPEGL--KLISDIIREKMG-IDISVLMGANIANEVAAEKFCETTIG--------SKVM---------ENGLLFKELL-QTP--NFRITVVDDADTVELCGALKNIVAVGAGFCDGLRCGDNTKAAVIRLGLMEMIAFARIFCKGQV--STATFL-ESCGVADLITTCYG--GRNRR-VA--------------E-----AFAR----------TG----KTIEELEKEMLNGQK--LQGPQTSAEVYRILKQKGLLD--K--FPLFTAVYQICYESRP--------------------------
22 PsiBlast_CBE 73.5231% -2 - C2 - - 2PLA GPD1L_HUMAN B:[6-336] --------------------LKVCIVGSGNWGSAVAKIIGNNVKKLQKFAS--------T---------VKMWVFEETVNGRKL-----TDIINNDHENVKYLPGHKLPENVVAMSNLSEAVQDADLLVFVIPHQFIHRICDEITGRV------P-KKA------LGITL-IKGID--EGPEGL--KLISDIIREKMG-IDISVLMGANIANEVAAEKFCETTIG--------SKVM---------ENGLLFKELL-QTP--NFRITVVDDADTVELCGALKNIVAVGAGFCDGLRCGDNTKAAVIRLGLMEMIAFARIFCKGQV--STATFL-ESCGVADLITTCYG--GRNRR-VA--------------E-----AFAR----------TG----KTIEELEKEMLNGQK--LQGPQTSAEVYRILKQKGLLD--K--FPLFTAVYQICYESRP--------------------------