@TOME V2.3
(Mar 2018)

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3D Common Core:

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Modeller Result :

Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : B0VKW0: (2017-10-30 )
MKKPVPKIYRTTNWSSYNQALIKRGNISIWFDPKTQWYAQPQGKHGRNQTYSDAAIQCCLMIKSLFRLSLRMVTGFAQSLIKLCGLNWTAPDYSTLCRRQKRIDIAISYQQSRDGLHLLVDSTGLKFLGEGEWKRKKHQPAYRRQWRKLHIGIDAKTLQIRAVQLTTNNVSDSQVLGDLLDQIPLDERIDSVYTDGAYDTKHCRQVILDRDAHAVIPPRKNAKPWKDKKLRSLERNELLKTVKRLGRSLWKKWSGYHRRSLVETKMHCIK

Atome Classification :

(20 SA) -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------.....------....----10-...---.---.....20----.------...--------.------.---.---..30..---......40...---......--------50--------...-------......---60---------.---------------......------..70.....---------------------.-----------..------80...-.----------------------.-.--..90.....-----------.----..100--------..--..--..----.110..-------..-----------..--..120....---.-----.-.130--.---...-.-....140---..-.......150.-----------------..--.-----..--.160.......170-.....-...180..-.-....190.......200------.....-..-.-210....--...---------------220-.-.......-------------------230.-------------....-----...240----........250..------------......260.......270---------------------------------------------------------------------
(Atome) (Ident) (Tito) (Num) (QMean) (Ligand) (Uniprot) -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MKKPV------PKIY----R--TTN---W---SSYNQA-----L------IKR--------G------N---I---SIWFDP---KTQWYAQ-PQG---KHGRNQ--------T---------YSD-------AAIQCC---L----------M---------------IKSLFR------LSLRMVTGF---------------------A-----------QS------LIKLC-G----------------------L-N--WTAPDYSTL-----------C----RRQKR--------ID--IA--IS----YQQ-SR-------DG-----------LH--LLVDSTGLK---F-----L-GE----G---EWK-R-KKHQP-----AY-RRQWRKLHIGI-----------------DA--K-----TL--QIRAVQLTTNNVS--DSQVL-GDLLDQIP-L-DERIDSVYTDGAYDTK-------HCRQV-IL-D-RDAHAVI--PPR---------------KN--A-KPWKDKK-------------------LR-S-------------LERN-----ELLKT-----VKRLGRSLW-KKW------------SGYHRRSLVETKMHCIK-----------------------------------------------------------------------
26 Fugue 59.9216% 25 - C2 - - 4IIK SIDD_LEGPH A:[1-314] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MRSII------TQICNGVLH--GQS---Y---QSGSND-----L------DK---------G------N---S---EIFASS---L-FVHLN-EQG---KEIKDSDDKIVIGYT---------KDG-------MAFQIV---VDGFYGCERQAV---------------FSFIDN------YVLPLIDNF---------------------S-----------LD------LTRYPDS----------------------K-K--VTESLIHTI-----------Y----SLRSKHAPLAEFTMS--LC--VT----YQK-DE-------QL-----------FCAGFGIGDTGIA---I-----KRNE----G---T------IEQL-----VC-HTEVDGFKDAF-----------------DN--Y-----SS--ANIDLVIERNSVF--NTKVMPGDELVGYTYV-PPMLEMTEKEFEVEKR-------IVRHL-NL-D-PGNFDDK--DPL---------------FSQLL-QVVKSKQ-------------------KQ-L-------------VEQA-----KETGQ-----IQRFGDDFTVGRL------------VIPDQLLINQLRIHALS-----------------------------------------------------------------------
24 Fugue 55.8116% 14 - C1 - - 4NWV - ? A:[30-384] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SVAPVAKANALRTTSSNSILLKGC------DRIV----T--VVD---A---STYDAG--------------S--------A------I---V---SIPITP---DIAYRLG-STA---RTFQRI--------K---------YRS-------LKFRVN---A----------Q---------------CAT--T------TAGGYVAGF---------------------VKDAADVLPTGTAS------IPYLM-S----------------------N-TGSFTQPWWKST-----------V----HNVKI--------PQ--KL--FY----TEA-PT-------RGADAVREYCPGQFH--VLVDSKPSQICPV-----T-VD----L---EWV-V-ELHDA-----TF-RKESDQTAISA-----------------IVADH-----TL--NVYGLPATSNRVG--HILIS-PIGQTPKD-L-TPTRFATFFGFLPDDK-------FC--V-RI-P-TPVDVVL--TGD---------------NV--Y-QSVEATH-------------------IR-AYLVNGGLGIDFHLAAYN-----DTTHT-----IQPIIPTLW-NVYDV----------TGAVTAPFTSAIYDNHVWTHKDKFVPVSFQDEPIPGTVFDYLYPRS------------------------------------------
23 Fugue 55.3217% 11 - C2 - - 1YT3 - RND_ECOLI A:[1-375] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MNYQMITTDDALASLCEAVRAF------PAIA----L--DTE---F---VRTRTY-----Y------PQL--------G------L---I---QL-FDG---EHLALID-PLGITDWSPLKA--------I---------LRD-------PSITKF---LHAGSEDLE--V---------------FLNVFGELPQPLIDTQILAAF---------------------CGRPMSWGF---AS------MVEEY-SGVTLDKSESRTDWLARPLTERQC-E--YAAADVWYL-----------L----PITAK--------LM--VE--TEASGWLPA-AL-------DE-----------CR--LMQMRRQEV---V-----A-PE----D---AWR-D-ITNAW-----QLRTRQLACLQLLA-----------------DW--R-----LR--KARERDLAVNFVV--REEHL-WSVARYMP-GSLGELDSLGLSGSEIRF-------HGKTL-LA-L-VEKAQTL--PEDALPQPMLNLMDMPGYRK--A-FKAIKSL-------------------IT-D-------------VSETHKISAELLAS-----RRQINQLLN-WHWKLKPQNNLPELISGWRGELMAEALHNLLQEYPQ-------------------------------------------------------------------
25 Fugue 50.3121% 24 - C2 - - 5GNG - Y1552_HAEIN A:[1-214] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MKTKFYDYQGEHLIL----Y--FAG---W---GTPPDAVNHLIL------PEN--------H------D---L---LICYD---------YQ-DLN---LDFDLS--------A---------YRH---------IRLV---A----------W---------------SMGVW-------VAERVLQGI----------------------------------R------LKSAT-A----------------------V-N--GTGLPCDD-------------------------------S--FG--IP----YAI-FK-------GT-----------LE--NLTENTRLK---F-----E-RR----ICGDKAS-F-ERYQL-----FP-ARPFDEIHQEL-----------------TA--L-----FA--MIQQ----------------------------DKRIDLI----------------HWANA-WVSS-RDK--IF--TPA---------------NQ--H-QYWALRC-------------------AV-Q-------------EIEG-----EHY-V-----FSR-----F-THW------------SALWD-----------------------------------------------------------------------------------
22 Fugue 46.2019% -11 - C2 - - 5T6O - PHAC_CUPNH A:[1-389] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SAFEVGRNVAVTEGAVVFENEYFQLLQYKPLTDKVHARPLLMVPPC------INKY----Y--ILD---LQPESSLVRH-----V------VEQ--------G------HTVFL---VSWRNP---DASMAGS-T--------WDD--------Y---------IEH-------AAIRAI---E----------V---------------ARDISG------QDKINVLGFAVGGTIVSTALAVLAARGEHPA-----------AS------VTLLT-T----------------------LLD--FADTGILDVFVDEGHVQGAPC----ALLRG--------LE--LANTFS----FLR-PN-------DL-----------VW--NYVVDNYLK---GNTPVPF-DL----L---FWN-GDATNLP-----GP-WYCWYLRHTYL-----------------QN--ELKVPGKL--TVCGVPVDLASIDV-PTYIY-GSREDHIV-----PWTAAYASTALLAN-------KLRFV-LG-A-SGHIAGVINPPA---------------KN--KRSHWTNDA-------------------LP-E-------------SPQQ-----WLAGA-----IEHHG-SWW-PDW------------TAWLAGQAGAKRAAPANYGNARYRAIEPAPGRYVKAKA--------------------------------------------------
28 Fugue 44.9416% 70 - C2 - - 2PNN TRPV1_RAT A:[11-258] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LYDRRSI------FDAV----A--QSNCQEL---ESLLPF-----L------QRS--------K------K---RLTDSEFKDPETGKTCLLKAMLNL---HNGQN--------------------------------------D----------T---------------IALLLD------VARK--------------------------T-----------DS------LKQFV-N----------------------A-S--YTDSYY-------------------KGQTA--------LH--IA--IE----RRNMTL-------VT-----------LL--VENGADVQA---A-----A-NG----D---FFK-K-TKGRP-----GF-Y--FGELPLSL-----------------AA--C-----TN--QLAIVKFLLQN-----SWQP-ADISARDS-V-GNTVLHALVEVADNTV-------DNTKF-VT-SMYNEILIL--GAK---------------LH--P-TL----K-------------------LE-E-------------ITNR-----KGLTP-----LALAASSGK-IGV------------LAYILQREIH------------------------------------------------------------------------------
21 Fugue 43.1119% 29 - C2 - - 4X0Q DPOLQ_HUMAN A:[6-772] SLSIIDVASDQNLFQTFIKEWRCKKRFSISLACEKIRDDTLVVGLAVCWGGRDAYYFSLLDPSLTLKDRMWYLQSCLRKESDKECSVVIYDFIQSYKILLLSCGISLEQSYEDPKVACWLLDPDSQEPTLHSIVTSFLPHELPLLEGMETSQGIQSLGLNAGSEHSGRYRASVESILIFNSMNQLNSLLQKENLQDVFRKVEMPSQYCLALLELNGIGFSTAECESQKHIMQAKLDAIETQAYQLAGHSFSFTSSDDIAEVLFLELKLPPQFSTSKDVLNKLKALH------PLPG----L--ILE---W---RRITNA-----ITKVVFPLQR--------E------K---C---LNPFLG---MERIYPV-SQS---HTATGRI-------T---------FTE-------PNIQNVPRDF----------E---------------IKMGMP------FSISM-------------------------R-----------HA------FVPFP-G----------------------G-S--ILAADYS----------------------Q--------LE--LR--IL----AHL-SH-------DR-----------RL--IQVLNTGAD---V-----F-RS----I---AAE-W-KMIEPESVGDDL-RQQAKQICYGIIYGM-------------GA--K-----SL--GEQM------GIK--ENDAA-CYIDSFKS-R-YTGINQFMTETVKNCK-------RDGFV-QT-I-LGRRRYL--PGI---------------KD--N-NPYRKAH-------------------AE-R-------------QAIN-----TIVQGSAADIVKIATVNIQ-KQL------------ETFHS----TFKSHGHREGMLQSDCPIRGGFFILQLHDELLYEVAEEDVVQVAQIVKNEMESAVKLSVKLKVKVKIGASWGELKDFDV
30 Fugue 42.3713% 15 - C2 - - 1L9V - NSP2_ROTSR A:[1-313] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MAELACFC------YPHL----ENDSYK---F---IPFNNL-----A------IKAMLTAKVDKK------D---M---DKFYDS---IIYGIAP-PPQ---FKKRYN--------TNDNSRGMNFETI-------MFTKVA---M----------L---------------ICEALN----------SLKVT---------------------Q-----------AN------VSNVL-S----------------------R-V--VSIRHLENL-----------V----IRKEN--------PQDILF--HS----KDL-LL-------KS-----------TL--IAIGQSKEI---E-----T-TITAEGG---EIV-F-QNAAF-----TM-WKLTYLEHQLM-----------------PI--L-----DQ--NFIEYKVTLNEDKPISDVHV-KELVAELR-W-QYNKFAVITHG---KG-------HYRIVKYS-S-VANHADR--VYA---------------TF--K-SNVKTGVNNDFNLLDQRIIWQNWYAFTS-S-------------MKQG-----NTLDV-----CKRLLFQKM-KPE------------KNPFKGLSTDRKMDEVS-----------------------------------------------------------------------
1 PsiBlast_PDB 42.2723% -27 - C2 - - 2HDW - Y2218_PSEAE A:[116-255] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YAQT-----M------AER--------G------F---V---TLAFDP---S---YTG-ESG---GQPRNV--------A---------SPDINTEDFSAAVDFI---S----------L---------------LPEVNR------ERI----------------------------------------G------VIGIC-G----------------------W-G--GMALNAVAV-----------D----KRVKA--------VV--TS--TM----YDM-TRVMSKGYNDS-----------VT--LEQRTRTLE---Q-----L-GQ----Q---RWKDA-ESGTP-----AY-QPPYNELKGG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
27 Fugue 42.0511% 23 - C2 - - 3BXW - CHID1_HUMAN A:[33-393] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TLLEKSQFSDKPV------QDRG----L--VVT---D---LKAESV-----V------LEH--------RSYCSAKA---R---DRHFAG---DVLGYVT-PWN---SHGYDV--------T---------KVF-------GSKFTQ---I----------SPVWLQLKRRGREMFEVTGLHD------VDQGWMRAV---------------------R-----------KHAKGLHIVPRLL-F----------------------E-D--WTYDDFRNV-----------LDSEDEIEEL--------SK--TV--VQ----VAK-NQHF-----DG-----------FV--VEVWNQLLS---Q-----R-VG----L---IHM-L-THLAE-----AL-HQARLLALLVIPPAITPGTDQLGMFTHKEF--E-----QLAPVLDGFSLMTYDYS--TAHQP-GPNAPLSW-V-RACVQVLDPKSKWRSKILLGLNFYGMDY-AT-S-KDAREPV--VGA---------------RY--I-QTLKDHR-------------------PRMV-------------WDSQ-----ASEHF-----FEYKKSRSG-RHV------------VFYPTLKSLQVRLELARELGVGVSIWELGQGLDYFYDLL-------------------------------------------------
29 Fugue 41.6214% 21 - C2 - - 3WRY ? A:[8-431] -------------------------------------------------------------------------------------------------------------------------------------------------------SPRVFCIGTADTKFDELRFLSEHVRSSLNSFSNKSSFKVGVTVVDVSTSWKETNSCADFDFVPSKDVLSCHTLGEETMGTFADTRGLAIAIMSKALETFLSIANDEQNLAGVIGLGGSGGTSLLSSAFRSLPIGI------PKVI----I--STV---A---SGQTES-----Y------IGT--------S------D---L---VLFPSV---VDICGIN-NVS---KVVLSN--------A---------GAA-------FAGMVI---G----------R---------------LESKFT------VGVTMF-GV---------------------T-----------TP------CVNAV-K----------------------E-R--LVKEGYETL-----------V----FH-----------------------------------------------------------ATG---------------------------------V-----GG-RAMEDLVRGGF-----------------IQ--G-----VL--DITTTEVADYVVG--GVMAC-DSSRFDAI-L-EKKIPLVLSVGALD---------------MV-N-FGPKTTI--PPE---------------FQ--Q-RKIHEHN-------------------------------------EQV-----SLMRT-----TVGENKKFA-AFI------------AEKLNKASSSVCVCLPEKGVSALDAPGKDFYDPEATSCLTRELQMLLENNERCQVKVLPYHINDAEFANALVDSFLEISPK-------
2 PsiBlast_PDB 39.9738% -82 - C2 - - 4A3C - RPB1_YEAST A:[915-988] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------S--GSEIL-GDLKLQVL-L-DEE----YKQLVKDRK-------FLREV-FV-D-GEANWPL--P------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
14 PsiBlast_PDB 38.5638% -84 - C2 - - 1I3Q - RPB1_YEAST A:[915-987] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------S--GSEIL-GDLKLQVL-L-DEE----YKQLVKDRK-------FLREV-FV-D-GEANWPL--P------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
11 PsiBlast_PDB 38.4238% -96 - C2 - - 4A3G - RPB1_YEAST A:[915-988] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------S--GSEIL-GDLKLQVL-L-DEE----YKQLVKDRK-------FLREV-FV-D-GEANWPL--P------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
17 PsiBlast_PDB 37.9638%-102 - C2 - - 1K83 - RPB1_YEAST A:[915-988] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------S--GSEIL-GDLKLQVL-L-DEE----YKQLVKDRK-------FLREV-FV-D-GEANWPL--P------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
13 PsiBlast_PDB 37.7838% -71 - C2 - - 4A93 - RPB1_YEAST A:[915-988] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------S--GSEIL-GDLKLQVL-L-DEE----YKQLVKDRK-------FLREV-FV-D-GEANWPL--P------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
9 PsiBlast_PDB 37.6738%-103 - C2 - - 4A3L - RPB1_YEAST A:[915-985] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------S--GSEIL-GDLKLQVL-L-DEE----YKQLVKDRK-------FLREV-FV-D-GEANWPL--P------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
7 PsiBlast_PDB 37.6038% -81 - C2 - - 4A3J - RPB1_YEAST A:[915-985] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------S--GSEIL-GDLKLQVL-L-DEE----YKQLVKDRK-------FLREV-FV-D-GEANWPL--P------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
15 PsiBlast_PDB 36.7438% -85 - C2 - - 1I50 - RPB1_YEAST A:[915-987] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------S--GSEIL-GDLKLQVL-L-DEE----YKQLVKDRK-------FLREV-FV-D-GEANWPL--P------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
4 PsiBlast_PDB 36.2138% -87 - C2 - - 4A3D - RPB1_YEAST A:[915-988] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------S--GSEIL-GDLKLQVL-L-DEE----YKQLVKDRK-------FLREV-FV-D-GEANWPL--P------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------