@TOME V2.3
(Mar 2018)
Ref.
-
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Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
Show Ligands of Templates
Complexes Affinity Score
Main Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Complexes Tab
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : B0VQ14: (2017-11-24 )
MNTSAIVMLIISMVFVWGGLALSILHLTKHPEELDEVLEEVKDQHTL
Atome Classification :
(20 SA)
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------.........10........20........30.........40......---------------------------------------------------------------------------
(Atome)
(Ident)
(Tito)
(Num)
(QMean)
(Ligand)
(Uniprot)
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MN
T
S
A
I
V
M
L
I
I
S
M
V
F
V
W
G
G
L
A
L
S
I
L
H
LTK
H
-
P
E
E
L
D
E
V
L
E
E
V
K
DQHTL---------------------------------------------------------------------------
21
Fugue
75.14
23%
-20
- C2 -
-
3BT7
1
TRMA_ECOLI
A:
[1-369]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G
S
H
M
T
P
EHLPTEQ
Y
E
A
Q
L
A
E
K
V
V
R
L
Q
S
M
M
APFSDLV
P
E
V
F
R
S
PVSHYRM
R
A
E
F
R
I
W
H
DGD
D
L
Y
H
I
I
F
D
QQTK
S
R
I
R
V
DSFPAAS
E
L
I
N
Q
L
M
T
A
M
I
A
G
V
R
NNPVLRHKLF
Q
I
D
Y
L
T
T
LSN
Q
A
V
V
S
L
L
Y
HKKLD
D
E
W
R
Q
E
A
E
A
L
R
D
A
L
R
A
Q
NLN
V
H
L
I
G
R
A
TK
T
K
I
E
LDQD
Y
I
D
E
R
L
P
V
AG
K
E
M
I
Y
R
Q
V
E
NSFTQPN
A
A
M
N
I
Q
M
L
E
W
A
L
D
V
T
KGS
K
G
D
L
L
E
L
YCGNG
N
F
S
L
A
L
ARNFD
R
V
L
A
T
E
IA
K
P
S
V
A
A
A
Q
Y
N
I
A
A
N
HIDN
V
Q
I
I
RMA
A
E
E
F
T
Q
A
M
NGVREFNRLQGIDLKSYQCE
T
I
F
V
D
P
P
RSG
L
D
S
E
T
E
K
M
V
---------
Q
A
Y
P
R
I
L
Y
I
S
C
N
-
P
E
T
L
C
K
N
L
E
T
L
S
Q
T
H
K
V
E
R
L
A
L
F
DQFPYTH
H
M
Q
C
G
V
L
L
T
A
K---------------------------------------------------
15
HHSearch
59.66
37%
-211
- C2 -
-
4NZ2
2
CP2C9_HUMAN
A:
[282-308]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
T
T
S
T
T
L
R
Y
A
L
L
L
L
L
K
H
-
P
E
V
T
A
K
V
Q
E
E
I
---------------------------------------------------------------------------------
28
Fugue
54.55
17%
55
- C2 -
-
4Q71
4
?
A:
[3-990]
MPNIPPPFTAPYAPD
D
A
E
I
A
A
R
L
L
P
A
S
HLS
P
P
Q
E
A
R
I
H
R
T
A
T
R
L
I
E
A
I
R
KRLGG
V
E
D
M
L
R
E
F
ALS
T
K
E
G
L
A
L
M
V
L
A
E
A
L
L
R
VPD
A
R
T
A
D
Q
F
I
E
DKLGEGD
F
I
H
H
E
T
K
S
T
A
F
L
V
NASAWAR
V
I
Q
P
GETPDG
T
I
G
R
L
V
K
R
LG
A
P
A
V
R
T
A
T
R
Q
A
M
R
L
M
G
N
H
F
VLGET
I
E
Q
A
L
E
R
G
KPGQKTR
Y
S
F
DMLGEGART
A
A
D
A
R
R
Y
F
D
A
Y
A
S
A
I
E
T
I
G
K
A
AGNHALPD
R
P
G
I
S
V
K
L
S
A
L
H
PRFEAIS
R
A
R
V
M
V
E
L
V
P
Q
L
L
D
L
A
Q
R
A
K
A
H
D
L
N
F
T
V
D
A
E
E
ADR
L
E
L
S
L
D
V
I
A
A
T
L
A
DPSLKGWDG
F
G
L
A
I
Q
AYQKR
A
S
A
V
I
D
Y
V
D
A
L
A
R
A
H
D
R
K
L
M
V
R
L
V
KGAY
W
D
T
E
I
K
R
A
Q
E
R
GLDGYPVFTR
K
A
M
T
D
L
N
Y
V
A
C
A
S
K
L
L
A
L
RPR
I
F
P
Q
F
A
T
HN
A
L
T
V
A
T
V
L
E
M
A
EGSSG
F
E
F
Q
R
L
HGMG
E
A
L
Y
E
Q
L
A
K
D
H
AD
I
A
Y
R
T
Y
A
P
V
G
S
HRD
L
L
A
Y
L
V
R
R
L
L
E
N
G
ANSS
F
V
A
Q
A
A
DYRVP
V
P
A
L
L
QR
P
A
D
A
I
VRPQAAAHPRIPLPCDLFAPE
R
R
N
S
R
G
V
E
FGA
R
T
A
L
D
Q
L
L
T
D
V
K
A
EI
A
D
A
T
P
D
Q
A
H
A
A
V
A
A
A
R
A
G
F
A
G
W
S
R
TP
A
G
I
R
A
A
A
L
E
Q
A
A
H
L
L
E
S
R
S
A
H
F
I
A
L
L
Q
R
EGGKT
L
D
D
A
L
S
E
L
R
E
A
A
D
F
C
R
Y
Y
A
A
Q
G
R
K
L
FG
S
E
T
A
M
P
G
P
T
G
E
S
N
A
L
T
M
R
G
R
G
V
F
V
A
I
S
P
WNFPL
A
I
F
L
G
Q
V
T
A
A
L
M
A
G
N
S
V
V
A
K
P
A
EQT
P
R
I
A
R
E
A
V
A
L
L
H
E
A
GIPKSA
L
Y
L
V
T
G
D
G
R
I
G
A
A
L
T
A
HPDIA
G
V
V
F
T
G
S
T
E
V
A
R
S
I
N
R
A
L
A
A
KDGPI
V
P
L
I
A
E
T
G
G
I
N
A
M
I
A
D
ATAL
P
E
Q
V
A
D
W
V
V
T
S
A
FRSAGQRCSALR
L
L
F
V
Q
EDV
A
D
R
M
I
E
M
V
A
G
A
A
R
E
LKIGDPSDVATHVGPVID
V
E
A
K
Q
R
L
D
A
H
I
A
R
M
K
T
E
ARLH
F
A
G
P
A
P
EG
C
F
V
A
P
H
I
F
E
L
T
E
A
G
Q
L
T
E
E
V
F
G
P
I
L
H
V
V
R
Y
R
P
E
N
L
E
R
V
L
R
A
I
E
R
T
G
Y
G
L
T
L
G
V
H
S
RI
D
D
S
I
E
A
I
I
D
R
VQVG
N
I
Y
V
NRNMIGAVVGVQP
F
G
G
N
GLSGTGPKAGGPH
Y
L
A
R
F
A
T
E
Q
T
V
T
I
NTAAA
22
Fugue
54.43
28%
-225
- C2 -
-
5CMZ
-
?
B:
[2-33]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
T
W
E
E
W
D
K
K
I
E
E
L
I
K
K
-
S
E
E
L
I
K
K
I
E
E
Q
I
K
K
Q
E
----------------------------------------------------------------------------
16
HHSearch
50.37
26%
-256
- C2 -
-
4DXY
3
?
A:
[252-285]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
L
L
L
G
G
L
D
T
V
V
N
F
L
S
F
F
M
I
H
L
A
R
H
-
P
E
L
V
A
E
L
R
S
D
P
---------------------------------------------------------------------------------
20
HHSearch
49.92
25%
-169
- C2 -
-
3DBG
1
EIZFM_STRCO
A:
[277-304]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
E
T
I
A
S
T
I
M
W
L
L
Q
A
L
A
D
H
-
P
E
H
A
D
R
I
R
D
E
V
---------------------------------------------------------------------------------
19
HHSearch
49.74
25%
-135
- C2 -
-
3EL3
1
EIZFM_STRCO
A:
[277-304]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
E
T
I
A
S
T
I
M
W
L
L
Q
A
L
A
D
H
-
P
E
H
A
D
R
I
R
D
E
V
---------------------------------------------------------------------------------
1
PsiBlast_PDB
49.71
42%
-104
- C2 -
-
4QN9
1
NAPEP_HUMAN
A:
[339-366]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
S
M
A
I
H
W
G
T
F
A
L
A
N
E
H
Y
L
E
P
-
P
V
K
L
N
E
A
L
E
-----------------------------------------------------------------------------------
14
HHSearch
49.70
29%
-165
- C2 -
-
4UBS
6
CYP28_STRAW
A:
[229-262]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
L
L
I
A
G
H
E
T
T
A
N
M
I
S
L
G
T
F
T
L
L
R
H
-
P
E
Q
L
A
E
L
R
A
E
P
---------------------------------------------------------------------------------
23
Fugue
48.43
29%
169
- C2 -
-
5I0Q
-
M21_STRPY
A:
[16-49]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
A
K
L
S
E
------------
A
E
L
H
D
K
I
A
A
L
E
E
E
-
K
A
E
L
F
E
K
L
D
K
V
E
E
E
H
K
----------------------------------------------------------------------------
17
HHSearch
48.17
24%
-169
- C2 -
-
1LGF
1
C5B3_AMYOR
A:
[237-265]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
D
D
N
I
S
G
M
I
G
L
G
V
L
A
M
L
R
H
-
P
E
Q
I
D
A
F
R
G
D
----------------------------------------------------------------------------------
18
HHSearch
47.12
24%
-169
- C2 -
-
1LFK
1
C5B3_AMYOR
A:
[237-265]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
D
D
N
I
S
G
M
I
G
L
G
V
L
A
M
L
R
H
-
P
E
Q
I
D
A
F
R
G
D
----------------------------------------------------------------------------------
25
Fugue
46.40
24%
-70
- C2 -
-
5B16
-
DGCR8_HUMAN
B:
[1-25]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
A
N
L
H
I
L
S
K
L
-
Q
E
E
M
K
R
L
A
E
E
R
E
E
T
R
-----------------------------------------------------------------------------
29
Fugue
40.58
28%
-
* C2 *
-
3LCN
-
GFD1_YEAST
C:
[4-28]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
T
A
S
K
M
K
L
L
K
K
K
-
I
E
E
Q
R
E
I
L
Q
K
T
H
H
K
------------------------------------------------------------------------------
30
Fugue
40.49
24%
77
- C2 -
-
1XKM
-
?
B:
[1-25]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
N
L
V
S
G
L
I
E
A
R
K
Y
-
L
E
Q
L
H
R
K
L
K
N
C
K
V
-------------------------------------------------------------------------------
3
HHSearch
37.22
23%
-202
- C2 -
-
2K21
-
KCNE1_HUMAN
A:
[47-76]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
V
L
M
V
L
G
F
F
G
F
F
T
L
G
I
M
L
S
Y
I
R
S
K
K
L
-
E
H
S
N
D
---------------------------------------------------------------------------------------
27
Fugue
37.00
21%
87
- C2 -
-
4GEQ
-
F:
[2-20]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
K
D
-
P
N
E
V
R
S
F
L
Q
D
L
S
Q
V
L
A
R
---------------------------------------------------------------------------
2
HHSearch
34.19
20%
-194
- C2 -
-
2NDJ
-
KCNE3_HUMAN
A:
[70-99]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
I
L
F
V
M
F
L
F
A
V
T
V
G
S
L
I
L
G
Y
T
R
S
R
K
V
-
D
K
R
S
D
---------------------------------------------------------------------------------------
24
Fugue
33.45
12%
98
- C2 -
-
1R48
-
PROP_ECOLI
A:
[1-33]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
C
G
G
D
--------------
N
I
E
Q
K
I
D
D
I
D
H
E
-
I
A
D
L
Q
A
K
R
T
R
L
V
Q
Q
H
P
R
---------------------------------------------------------------------------
8
HHSearch
30.90
18%
-288
- C2 -
-
2RMZ
-
?
A:
[693-720]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
I
L
V
V
L
L
S
V
M
G
A
I
L
L
I
G
L
A
A
L
L
I
W
K
L
L
I
T
---------------------------------------------------------------------------------------------