@TOME V2.3
(Mar 2018)
Ref.
-
-
Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
Show Ligands of Templates
Complexes Affinity Score
Main Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Complexes Tab
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : B0VV66: (2017-12-22 )
MWKYLFSIFCLGANIHCYATDFGATNNFVSPNLQLKQNILPPTPKNIPLPAFGQRIIGWGTGAEGARQRLENIQPADVSMIKKQGTTLEMITAWQDFYEQEQQRNENNPTAKYRARLMKKIADLW
Atome Classification :
(20 SA)
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------.........10........20.......--------.30........40...--.....50.---.......60......-..70.--.......80........90--....-.....100.--......110.......120...-------
(Atome)
(Ident)
(Tito)
(Num)
(QMean)
(Ligand)
(Uniprot)
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------M
W
K
Y
L
F
S
I
F
C
LGAN
I
H
C
Y
A
TDFGATNNF--------VSPN
L
Q
L
KQNILPPTP--KNIPL
P
A
F---GQR
I
I
GWGT
G
A
E
G
A
R
-
Q
R
L
EN--IQP
A
D
V
S
M
I
KKQGT
T
L
E
M
---
I
T
A
W
-
Q
D
F
Y
E
Q
E
Q
Q--RNENNP
T
A
K
Y
R
A
R
L
M
K
K
I
ADLW-------
27
HHSearch
81.67
98%
-91
- C2 -
-
2MMB
-
?
A:
[2-107]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
T
D
F
G
T
T
N
N
F
--------
V
S
P
N
L
Q
L
K
Q
N
V
L
P
P
T
P
--
K
N
I
P
L
P
A
F
---
G
Q
R
I
I
G
W
G
T
G
A
E
G
A
R
-
Q
R
L
E
N
--
I
Q
P
A
D
V
S
M
I
K
K
Q
G
T
T
L
E
M
---
I
T
A
W
-
Q
D
F
Y
E
Q
E
Q
Q
--
R
N
E
N
N
P
T
A
K
Y
R
A
R
L
M
K
K
I
A
D
L
W
-------
17
Fugue
81.27
97%
-91
- C2 -
-
2MMB
-
?
A:
[1-107]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
T
D
F
G
T
T
N
N
F
--------
V
S
P
N
L
Q
L
K
Q
N
V
L
P
P
T
P
--
K
N
I
P
L
P
A
F
---
G
Q
R
I
I
G
W
G
T
G
A
E
G
A
R
-
Q
R
L
E
N
--
I
Q
P
A
D
V
S
M
I
K
K
Q
G
T
T
L
E
M
---
I
T
A
W
-
Q
D
F
Y
E
Q
E
Q
Q
--
R
N
E
N
N
P
T
A
K
Y
R
A
R
L
M
K
K
I
A
D
L
W
-------
1
PsiBlast_PDB
79.94
97%
-91
- C2 -
-
2MMB
-
?
A:
[1-107]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
T
D
F
G
T
T
N
N
F
--------
V
S
P
N
L
Q
L
K
Q
N
V
L
P
P
T
P
--
K
N
I
P
L
P
A
F
---
G
Q
R
I
I
G
W
G
T
G
A
E
G
A
R
-
Q
R
L
E
N
--
I
Q
P
A
D
V
S
M
I
K
K
Q
G
T
T
L
E
M
---
I
T
A
W
-
Q
D
F
Y
E
Q
E
Q
Q
--
R
N
E
N
N
P
T
A
K
Y
R
A
R
L
M
K
K
I
A
D
L
W
-------
36
HHSearch
37.65
9%
-257
- C2 -
-
3J1U
-
DYHC1_MOUSE
A:
[3288-3309]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
I
E
A
Q
-
N
A
V
K
S
--
I
K
K
Q
H
L
V
E
V
R
S
M
A
-----------------------------------------------------
30
HHSearch
35.54
21%
-280
- C2 -
-
2P0O
-
?
A:
[122-162]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
T
--
I
T
L
E
E
V
A
E
L
K
A
H
Q
A
D
F
S
R
---
L
E
A
W
-
H
N
Y
Y
P
R
----------------------------------
19
Fugue
32.63
19%
-105
- C2 -
-
1V74
-
IMMD_ECOLX
B:
[1-87]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
N
K
M
----------------------------------
A
M
I
D
L
A
K
L
F
L
A
S
-----
K
I
T
A
I
E
F
---
S
E
R
I
C
V
-------
E
R
-
R
R
L
Y
G
--
V
K
D
L
S
-
P
N
I
L
N
C
G
E
E
L
F
M
---
A
A
E
---
R
F
E
P
D
A
D
R
--
A
N
Y
E
I
D
D
N
G
L
K
V
E
V
R
S
I
L
E
K
F
K
L------
10
PsiBlast_PDB
31.82
31%
-
- C4 -
-
4BQ7
-
NEO1_MOUSE
A:
[966-1009]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
R
R
S
S
T
W
S
M
T
A
H
G
A
T
F
E
L
V
P
T
--
S
P
P
K
D
V
T
V
V
S
K
E
G
K
P
R
T
I
---
I
V
N
W
-
Q
---------------------------------------
40
HHSearch
29.84
33%
-107
- C2 -
-
2RR7
-
?
A:
[14-34]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
E
A
A
L
-
K
A
L
D
T
--
L
K
P
A
D
I
T
E
V
K
G
M
------------------------------------------------------
13
PsiBlast_PDB
29.69
31%
11
- C4 -
-
4UI2
-
BMP2_HUMAN
A:
[87-130]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
R
R
S
S
T
W
S
M
T
A
H
G
A
T
F
E
L
V
P
T
--
S
P
P
K
D
V
T
V
V
S
K
E
G
K
P
R
T
I
---
I
V
N
W
-
Q
---------------------------------------
14
PsiBlast_PDB
29.26
31%
22
- C4 -
-
4BQ8
-
A:
[87-130]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
R
R
S
S
T
W
S
M
T
A
H
G
A
T
F
E
L
V
P
T
--
S
P
P
K
D
V
T
V
V
S
K
E
G
K
P
R
T
I
---
I
V
N
W
-
Q
---------------------------------------
23
Fugue
29.19
14%
17
- C2 -
-
5IK2
-
?
P:
[1-134]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
A
T
V
Q
V
D
I
V
T
P
E
R
K
V
F
Q
G
E
A
D
I
V
I
A
R
G
---------
V
E
G
E
L
G
V
M
A
G
H
I
P
L
V
T
PL
K
T
A
P
V
R
I
K
QGD
K
E
T
L
I
A
V
S
G
G
F
L
E
V
R
-
P
D
K
V
N
--
I
L
A
D
T
A
E
L
--
P
E
E
I
A
V
E
A
---
A
K
K
A
-
K
A
R
H
E
T
I
L
K
--
R
L
D
K
T
D
K
D
Y
L
R
H
K
R
A
L
E
R
A
E
V
R
LQVANSK
41
HHSearch
29.07
10%
-193
- C2 -
-
3G46
2
GLB1_ANAIN
B:
[121-141]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
V
L
A
S
K
N
F
G
D
K
Y
---
A
N
A
W
-
A
K
L
V
A
V
----------------------------------
4
PsiBlast_PDB
28.69
20%
50
* C3 *
-
5DAP
1
ASQJ_EMENI
A:
[202-295]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
A
L
L
I
T
D
S
T
I
H
C
G
G
A
E
T
T
G
T
E
T
R
R
L
L
T
I
T
M
G
I
S
Q
L
T
P
L
E
S
N
L
A
V
P
R
P
--
V
I
E
S
L
T
P
L
---
A
Q
R
L
L
G
W
A
S
Q
R
S
A
A
-----------
P
R
D
I
G
L
L
T
I
R
G
N
S
I
E
K
T
M
N
L
K
A
E
-
Q
P
L
-------------------------------------
20
Fugue
28.55
11%
102
- C2 -
-
2B1E
-
EXO70_YEAST
A:
[67-623]
TLNSVAS
V
K
D
L
A
N
E
A
S
K
Y
E
I
I
L
Q
K
GINQVG
L
K
Q
Y
T
Q
V
V
H
K
L
D
D
M
L
E
D
I
Q
SREEN
S
E
F
H
G
I
L
T
H
L
E
Q
L
I
K
R
S
E
A
Q
L
R
V
Y
F
I
S
I
L
N
SIKPFD
P
Q
I
N
I
T
K
KMP
F
P
Y
Y
E
D
Q
Q
L
G
A
L
S
W
I
L
D
Y
F
H
G
N
SE
G
S
I
I
Q
D
I
L
V
G
E
R
S
K
L
I
L
K
C
M
A
FLEPFAKGSSG
M
N
S
Y
T
E
A
L
L
G
F
I
A
N
E
K
S
L
V
D
D
L
Y
SQYTES
K
P
H
V
L
S
Q
I
L
S
P
L
I
S
A
Y
A
K
L
F
G
A
N
L
K
I
VRFGF
F
S
F
E
L
V
E
S
I
N
D
V
K
K
S
L
RGKELQN
Y
N
L
L
Q
D
C
T
Q
E
V
R
Q
V
T
Q
S
L
F
R
D
A
I
D
R
I
I
K
K
A
N
SISTIPSNNGVT
E
A
T
V
D
T
M
S
R
L
R
K
F
S
E
Y
K
N
G
C
L
G
A
MDNITRENWLPSNYKEKEYTLQNWED
H
N
V
L
L
S
C
F
I
S
D
C
I
D
T
L
A
V
N
L
E
R
K
A
Q
I
A
L
M
PNQEPDVANPNSSKNKH
K
Q
R
I
G
F
F
I
L
M
N
L
T
L
V
E
Q
I
V
E
K
S
E
L
N
L
M
L
AG
E
G
H
S
R
L
E
R
L
K
K
R
Y
I
S
Y
M
V
S
D
W
R
D
L
T
A
N
L
M
D
S
V
F
I
D
--------------------------------
S
S
G
K
--
K
S
K
D
K
E
Q
I
---
K
E
K
F
R
K
F
N
E
G
F
E
D
L
V
-
S
K
T
K
Q
Y
K
L
S
D
P
S
L
K
V
T
L
K
S
E
I
I
S
L
V
---
M
P
M
Y
-
E
R
F
Y
S
R
Y
K
D
SF
K
N
P
R
K
H
I
K
Y
T
P
D
E
L
T
T
V
L
N
Q
L
V
R------
15
PsiBlast_PDB
28.37
31%
27
- C4 -
-
4BQ9
-
NEO1_MOUSE
A:
[87-130]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
R
R
S
S
T
W
S
M
T
A
H
G
A
T
F
E
L
V
P
T
--
S
P
P
K
D
V
T
V
V
S
K
E
G
K
P
R
T
I
---
I
V
N
W
-
Q
---------------------------------------
42
HHSearch
28.16
30%
-
- C1 -
-
2NUD
-
D:
[9-14]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
K
F
---
G
D
W
D
-------------------------------------------------------------------------------------
26
Fugue
28.04
17%
-17
- C2 -
-
2N3Z
-
?
A:
[1-99]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
G
-----------------------------
R
L
V
V
V
V
T
S
E
Q
L
--
K
E
E
V
R
K
K
F
---
P
Q
V
E
V
R
L
V
T
T
E
E
D
A
K
-
Q
V
I
K
E
--
I
Q
K
K
G
V
Q
K
V
V
L
V
G
V
S
E
K
L
---
L
Q
K
I
K
Q
E
A
N
V
Q
V
Y
R
--
V
T
S
N
D
E
L
E
Q
V
V
K
D
V
K
G
S
G
L
E
H
H
H
H
H
H---
9
PsiBlast_PDB
27.89
31%
25
- C4 -
-
4BQ6
-
NEO1_MOUSE
A:
[87-130]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
R
R
S
S
T
W
S
M
T
A
H
G
A
T
F
E
L
V
P
T
--
S
P
P
K
D
V
T
V
V
S
K
E
G
K
P
R
T
I
---
I
V
N
W
-
Q
---------------------------------------
11
PsiBlast_PDB
27.78
31%
40
- C4 -
-
4BQB
-
NEO1_MOUSE
A:
[87-130]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
R
R
S
S
T
W
S
M
T
A
H
G
A
T
F
E
L
V
P
T
--
S
P
P
K
D
V
T
V
V
S
K
E
G
K
P
R
T
I
---
I
V
N
W
-
Q
---------------------------------------
12
PsiBlast_PDB
27.64
31%
35
- C4 -
-
4BQC
1
NEO1_MOUSE
A:
[87-130]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
R
R
S
S
T
W
S
M
T
A
H
G
A
T
F
E
L
V
P
T
--
S
P
P
K
D
V
T
V
V
S
K
E
G
K
P
R
T
I
---
I
V
N
W
-
Q
---------------------------------------