@TOME V2.3
(Mar 2018)
Ref.
-
-
Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
Show Ligands of Templates
Complexes Affinity Score
Main Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Complexes Tab
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : I3TYV9: (2017-12-15 )
MNDFTTEIVQTLVTKGDLNELFRSHLEKAINTLLRTELTAFLDYEKYDRTGFNSGNSRNGSYFRSIKTEYGELTLEIPRDRNGEFKQQTLPAYKRTNDTLETTIIHLFEKGVTMSEIADLIEKMYGHHYTPQTMSNMTKVLTEEVNAFKSRALNDKYVAIFMDATYIPLKRQTVSKEAIYIAIGIREDGTKEVLSYAIAPTESTYVWNELLQDINSRGVQEVLLFITDGLKGMKDTIHQILS
Atome Classification :
(20 SA)
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------.....-----------....10........20...-....-.30-----------......---...40...--.....50..-...-------...60....-------.....70........80..----......90--........100-...----.--.-..-110-------..--....------------------..120...-..---------..130---........140-----------......---.150-------.....------------.---...160.......170.----.......180..--.----..----------..190.......200.....------..210....-...220--------..-----...-....230.....------------..240-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
(Atome)
(Ident)
(Tito)
(Num)
(QMean)
(Ligand)
(Uniprot)
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MN
D
F
T
-----------
T
E
I
V
Q
T
L
VTKG
D
L
N
E
L
F
R
S
-
H
L
E
K
-
A
I
------------
N
T
L
L
R
T
---
E
L
T
A
F
L
D
Y
--
E
KYDRTGFN-SGN-------SRN
G
-
S
Y
F
R
-------
S
I
K
TEYG
E
L
T
L
EIPRDRNG----E
F
K
Q
QTLP--AYKRTND
T
L
E
T
-
T
I
I
----
H
--
L
-
F
E-KG--------V
T
--
M
S
E
I
------------------
A
D
L
I
E
K
M
Y-GH---------HYT
P
----
Q
T
M
S
N
M
T
K
V
L
T
-----------
E
E
V
N
A
F
---
K
S
---------RALND------------
K
---
Y
V
A
I
F
M
DA
T
Y
IPLKR-Q----TVSKE
A
I
Y
I
A
I
G
--I----RE----------D
G
T
K
E
V
L
S
Y
AIAPTE
S
T
Y
V
W
------
N
E
L
L
Q
D
I
N
S-R
G
V
Q
----------
E
V
-----
L
L
F
-
I
TDGL
K
G
M
K
D
T
I
------------
H
Q
ILS-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
46
Fugue
59.85
23%
2
- C4 -
-
4OCV
2
?
A:
[24-378]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
T
N
E
A
L
-----------
F
D
V
A
S
H
F
A
L
E
G
T
V
D
S
I
E
P
Y
-
G
-
D
G
-
H
I
------------
N
T
T
Y
L
V
---
T
T
----
D
G
--
P
R
Y
I
L
Q
R
M
N
-
T
G
I
FPD
T
V
N
L
M
R
N
V
-
E
L
V
T
-------
S
T
L
K
A
Q
G
K
E
T
L
D
I
V
R
T
T
S
G
DTWA
E
I
D
G
G
A
W
R
--
V
Y
K
F
I
E
H
T
M
S
Y
-
N
L
V
PN
P
D
V
--
F
-
R
E
-
A
G
--------
R
A
--
F
G
D
F
------------------
Q
N
F
L
S
G
F
D
-
A
N
QLTETIAHF
H
D
T
P
----
H
R
F
E
D
F
K
K
A
L
A
A
DELGRAAGC
G
P
E
I
E
F
Y
---
L
S
H
ADQYA
V
V
M
D
G
L
R
D
GSIPLRVTHNDT
K
---
L
N
N
I
L
M
D
A
T
T
G
K
A
R
A
-
I
IDLD
T
I
M
P
G
S
M
L
F
D
F
G
D
S
I
----
R
F
GASTALEDER
D
L
D
K
V
H
F
S
T
E
L
F
R
A
Y
T
E
G
F
V
------
G
E
L
R
D
S
I
T
A
-
R
E
A
E
----------
L
L
P
F
S
G
N
L
L
T
-
M
E
C
G
M
R
F
L
A
D
Y
L
E
GDVYFATKYPE
H
N
L
V
R
S
R
T
Q
I
K
L
V
R
E
M
E
Q
R
A
D
E
T
R
A
I
V
A
D
V
M
E
T
T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
28
HHSearch
50.58
18%
-283
- C- -
-
1K78
-
PAX5_HUMAN
A:
[31-74]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
R
P
L
P
D
V
V
R
Q
-
R
I
V
----
E
--
L
-
A
H
-
Q
G
--------
V
R
--
P
C
D
I
------------------
S
R
Q
L
R
----------------
V
S
H
----
G
C
V
S
K
I
L
G
R
Y
Y
-----------
E
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
49
Fugue
48.91
18%
2
- C3 -
-
5TUC
-
?
A:
[15-345]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TRIDL
G
E
R
P
V
V
Q
R
R
E
P
VS
L
E
E
W
T
K
N
IDSEGRILN
V
D
N
M
K
Q
M
I
F
R
G
G
L
S
H
A
L
R
K
-
Q
A
W
K
-
F
L
L
GYFPWDST
K
E
E
R
T
E
L
Q
K
---
Q
K
T
D
E
Y
F
R
--
M
K
L
Q
W
K
S
V
S
-
E
E
Q
-------
E
K
R
N
-
S
R
L
R
-------
D
Y
R
S
L
I
E
K
D
V
N
R
T
D
R
T
-
N
K
----
F
Y
E
G
Q
D
N
P
--
G
L
I
L
L
H
D
I
L
M
T
-
Y
C
M
----
Y
--
D
-
F
D
-
L
G
--------
Y
V
QG
M
S
D
L
L
S
P
V
L
Y
V
M
EN
E
V
D
A
F
W
C
F
A
S
Y
M
D
Q
M
H
-
Q
N
---------
F
E
E
Q
MQ
G
M
K
T
Q
L
I
Q
L
S
T
L
L
-----------
R
L
L
D
S
G
---
F
C
---------
S
Y
L
E
S
------------
Q
DSG
Y
L
Y
F
C
F
R
W
L
L
I
R
F
K
R
-
E
----
F
S
F
L
D
I
L
R
L
W
E
V
--
M
W
T
EL
P
C
----------
K
N
F
H
L
L
L
C
C
A
I
L
E
S
E
K
Q
Q
I
M
E
K
HYG
F
N
E
I
L
K
H
I
N
E
-
L
S
M
K
ID
V
E
D
V
L
C
K
A
E
A
-----
I
S
L
-
Q
M
V
K
C
K
E
L
P
Q
A
V
------------
C
E
I
L
G
LQ-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
27
HHSearch
47.63
14%
-253
- C5 -
-
6PAX
-
PAX6_HUMAN
A:
[17-59]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
P
L
P
D
S
T
R
Q
-
R
I
V
----
E
--
L
-
A
H
-
S
G
--------
A
R
--
P
C
D
I
------------------
S
R
I
L
Q
----------------
V
S
N
----
G
C
V
S
K
I
L
G
R
Y
Y
-----------
A
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
45
Fugue
47.55
15%
16
- C4 -
-
5IFE
-
SF3B1_HUMAN
C:
[463-1304]
-------------------------------------------------------------------------------------------------------------------------------------------------------------NLPFLKPDDIQYFDKLL
V
D
V
D
ESE
E
Q
K
E
R
K
I
M
K
L
L
L
K
I
K
N
GT
P
P
M
R
K
A
A
L
R
Q
I
T
D
K
A
REFG
A
G
P
L
F
N
Q
I
L
P
L
L
M
SPTLE
D
Q
E
R
H
L
L
V
K
V
I
D
R
I
L
Y
K
L
DDLVRPY
V
H
K
I
L
V
V
I
EPLLIDED
Y
Y
A
R
V
E
G
R
E
I
I
S
N
L
A
K
A
A
G
L
A
T
M
I
S
T
M
RPDIDNMD
E
Y
V
R
N
T
T
A
R
A
F
A
V
V
A
S
A
L
GIPSL
L
P
F
L
K
A
V
C
K
SKKS
W
Q
A
R
H
T
G
I
K
I
V
Q
Q
I
A
I
L
M
GCAILPH
L
R
S
L
V
E
I
I
EHGLVDEQ
Q
K
V
R
T
I
S
A
L
A
I
A
A
L
A
E
A
A
TPYGIESFDSV
L
K
P
L
W
K
G
I
R
Q
HRG
K
G
L
A
A
F
L
K
A
I
G
Y
L
IPLMD
A
E
Y
A
N
Y
Y
T
R
E
V
M
L
I
L
I
R
E
F
QSPD
E
E
M
K
K
I
V
L
K
V
V
K
Q
C
C
G
TDGVE
A
N
Y
I
K
T
EI
L
P
P
F
F
K
HFWQ
H
R
M
A
L
D
R
R
N
Y
R
Q
L
V
D
T
T
V
E
L
A
N
K
VG
A
A
E
I
I
S
R
I
V
DDLKDEA
E
Q
Y
R
K
M
V
-----------
M
E
T
I
E
K
I
M
G
N
L
G
A
A
D
I
D
H
K
-
L
E
E
Q
-
L
I
------------
D
G
I
L
Y
A
----
F
Q
E
Q
T
T
E
--
D
S
V
M
L
N
G
F
G
-
T
V
V
-------
N
A
L
G
-
K
R
V
K
-------
P
Y
L
P
Q
I
C
G
T
V
L
W
R
L
N
N
K
S
A
----
K
V
R
Q
Q
A
A
D
--
L
I
S
R
T
A
V
V
M
K
T
-
C
------------
Q
-
E
E
--------
K
L
--
M
G
H
L
------------------
G
V
V
L
Y
E
Y
L
-
G
E
---------
E
Y
-
P
----
E
V
L
G
S
I
L
G
A
L
K
-----------
A
I
V
N
V
I
---
G
M
---------
H
K
M
T
P
------------
P
---
I
K
D
L
L
P
R
L
T
P
I
L
K
N
R
H
E
----
K
V
Q
E
N
C
I
D
L
V
G
R
--
I
----
A
D
----------
R
G
A
E
Y
V
---------------------------
S
A
-
R
E
W
M
----------
R
I
-----
C
F
E
-
L
L
E
L
L
K
A
H
K
K
A
I
------------
R
R
A
T
V
N
T
F
G
Y
I
A
K
A
I
GPHDVLATLQNR
V
C
T
T
V
A
I
A
I
V
A
E
T
C
SPFTV
L
P
A
L
M
N
E
Y
R
VPEL
N
V
Q
N
G
V
L
K
S
L
S
F
L
F
E
Y
I
GEMGKDYIYAV
T
P
L
L
E
D
A
L
MDRD
L
V
H
R
Q
T
A
S
A
V
V
Q
H
M
S
L
G
V
YGFGC
E
D
S
L
N
H
L
L
N
Y
V
W
P
N
VFETS
P
H
V
I
Q
A
V
M
G
A
L
E
G
L
R
V
A
IG
P
C
R
M
L
Q
Y
C
LQGLFHPA
R
K
V
R
D
V
Y
W
K
I
Y
N
S
I
Y
I
G
SQDALIAHY
P
R
I
Y
N
D
DKNTYIRYELDYIL------------------------------------
51
Fugue
46.84
16%
7
- C4 -
-
3W3W
-
IMB3_YEAST
A:
[3-1077]
ALP
E
E
V
N
R
T
L
L
Q
I
V
Q
A
FASD
N
Q
I
R
S
V
A
E
K
A
L
S
EEWITENN
I
E
Y
L
L
T
F
L
A
E
Q
A
A
FSQD
T
T
V
A
A
L
S
A
V
L
F
R
K
L
A
L
K
A
PITHIR
K
E
V
L
A
Q
I
R
S
S
L
L
K
G
F
L
SERA
D
S
I
R
H
K
L
S
D
A
I
A
E
C
VQDDLPAW
P
E
L
L
Q
A
L
I
E
S
L
K
SGN
P
N
F
R
E
S
S
F
R
I
L
T
T
V
P
Y
L
I
T
A
VD
I
N
S
I
L
P
I
F
Q
S
G
F
T
DAS
D
N
V
K
I
A
A
V
T
A
F
V
G
Y
F
K
Q
LPKSEWSKLGIL
L
P
S
L
L
N
S
L
P
R
F
L
D
D
GK
D
D
A
L
A
S
V
F
E
S
L
I
E
L
V
E
L
APKLFKDM
F
D
Q
I
I
Q
F
T
D
M
V
I
K
NKDLEP
P
A
R
T
T
A
L
E
L
L
T
V
F
S
E
N
A
P
Q
M
C
K
S
N
Q
N
Y
G
Q
T
L
V
M
V
T
L
I
M
M
T
EVSIDDDDA
A
E
W
I
E
SDDTDDEEE
V
T
Y
D
H
A
R
Q
A
L
D
R
V
A
L
K
LGGEYL
A
A
P
L
F
Q
Y
L
Q
Q
M
I
T
STE
W
R
E
R
F
A
A
M
M
A
L
S
S
A
AEGCA
D
V
L
I
G
E
I
P
K
I
L
D
M
V
I
P
L
I
NDPH
P
R
V
Q
Y
G
C
C
N
V
L
G
Q
I
S
T
D
F
S
P
F
I
Q
R
T
A
H
D
R
I
L
P
A
L
I
S
K
L
TSECT
S
R
V
Q
T
H
A
A
A
A
L
V
N
F
S
E
FASKDILEPY
L
D
S
L
L
T
N
L
L
V
L
L
Q
SNK
L
Y
V
Q
E
Q
A
L
T
T
I
A
F
I
A
E
A
A
KNKFIKYYDTL
M
P
L
L
L
N
V
L
K
VN
S
V
L
K
G
K
C
M
E
C
A
T
L
I
G
F
A
V
G
K
E
K
F
H
E
H
S
-----------
Q
E
L
I
S
I
L
V
A
L
Q
N
-
S
D
A
L
R
S
-
Y
L
E
Q
-
S
W
------------
S
R
I
C
R
I
L
GD
D
F
V
P
L
L
P
I
VI
P
P
L
L
I
T
A
K
A
-
T
Q
D
--------------------------------
V
G
L
I
E
E
E
E
A
A
----
N
F
Q
Q
--
Y
P
--
D
W
D
V
V
Q
V
Q
G
K
H
-
I
A
I
----
H
T
S
V
-
L
D
-
D
K
--------
V
S
--
A
M
E
L
------------------
L
Q
S
Y
A
T
L
L
-
R
G
---------
Q
F
A
V
----
Y
V
K
E
V
M
E
E
I
A
L
-----------
P
S
L
D
F
Y
LH
D
G
V
---------
R
A
A
G
A
------------
T
---
L
I
P
I
L
L
S
C
L
L
A
A
E
E
L
-
V
----
L
L
W
H
K
A
S
S
K
L
I
G
--
G
----------------------
L
M
S
E
P
M
P
E
I
T
Q
V
Y
H
------
N
S
L
V
N
G
I
K
V
-
M
G
D
N
------------------
C
L
-
S
E
D
Q
L
A
A
F
T
K
G
V
------------
S
A
N
L
T
D
T
Y
E
R
M
Q
DRDEYNED
F
T
D
E
D
L
L
D
E
I
N
K
S
I
A
A
V
L
K
T
T
N
GHY
L
K
N
L
E
N
I
W
P
M
I
N
T
F
L
LE
P
I
L
V
I
F
A
L
V
V
I
G
D
L
I
Q
YEQTASMKNAF
I
P
K
V
T
E
C
L
ISPD
A
R
I
R
Q
A
A
S
Y
I
I
G
V
C
A
Q
YAPSTYADVCIPT
L
D
T
L
V
Q
I
V
DGSKLEEN
R
S
S
T
E
N
A
S
A
A
I
A
K
I
L
Y
A
Y
NSNIPD
T
Y
T
A
N
W
F
K
T
LPTITD
K
E
A
A
S
F
N
Y
Q
F
L
S
QVCAQSN
I
S
A
V
V
D
S
V
I
Q
A
L
N
E
RSLT
V
I
S
S
V
K
K
L
L
G
F
L
P
S
S
D
A
M
A
I
F
N
RYP
A
D
I
M
E
K
V
H
K
W
F
31
HHSearch
46.52
11%
-277
- C5 -
-
1PDN
2
PRD_DROME
C:
[16-59]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
R
P
L
P
N
N
I
R
L
-
K
I
V
----
E
--
M
-
A
A
-
D
G
--------
I
R
--
P
C
V
I
------------------
S
R
Q
L
R
----------------
V
S
H
----
G
C
V
S
K
I
L
N
R
Y
Q
-----------
E
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
43
Fugue
44.79
16%
21
* C4 *
-
4G3A
-
CLASP_DROME
A:
[5-231]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
K
P
S
D
L
D
G
F
I
Q
Q
M
P
K
A
D
M
R
V
------------
K
V
Q
L
A
E
---
D
L
V
T
F
L
S
D
--
D
T
N
S
I
V
C
T
D
M
G
F
L
-------
I
D
G
L
M
P
W
L
T
-------
G
S
H
F
K
I
A
Q
K
S
L
E
A
F
S
E
L
-------
I
K
R
L
G
S
D
--
F
N
A
Y
T
A
T
V
L
P
H
-
V
I
D
----
R
--
L
-
G
D
-
S
R
--------
D
T
--
V
R
E
K
------------------
A
Q
L
L
L
R
D
L
M
E
H
---------
R
V
L
P
------
P
Q
A
L
I
D
K
L
A
-----------
T
S
C
F
K
H
---
K
N
---------
A
K
V
R
E
------------
E
---
F
L
Q
T
I
V
N
A
L
H
E
Y
G
T
Q
-
Q
----
L
S
V
R
V
Y
I
P
P
V
C
A
--
L
----
L
G
----------
D
P
T
V
N
V
R
E
A
A
I
Q
T
L
V
E
I
Y
K
H
VG----
D
R
L
R
P
D
L
R
R
M
D
D
V
P
----------
A
S
-----
K
L
A
M
L
E
Q
K
F
D
Q
V
K
L
E
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
8
PsiBlast_PDB
43.69
24%
93
- C5 -
-
5HLB
1
PBPB_ECOLI
A:
[128-273]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
N
-
M
E
N
-------
N
R
Q
F
-
G
F
F
R
L
D
P
R
LIT
M
I
S
S
P
N
G
E
Q
R
L
F
V
P
R
S
G
F
P
----
D
L
L
V
D
T
L
-----------
L
A
T
-
E
D
R
----
H
--
F
-
Y
E
H
D
G
--------
I
S
--
L
Y
S
I
------------------
G
R
A
V
L
A
N
L
-
T
A
---------
G
R
T
V
----
Q
G
A
S
T
L
T
Q
Q
L
V
-----------
K
--
N
L
F
---
L
S
SERSY
W
---
R
K
A
N
E
------------
A
---
Y
M
A
L
I
M
D
A
R
Y
S
K
D
R
I
-
L
----
E
L
Y
M
N
E
V
Y
L
G
----------
Q
----------
S
G
D
N
E
I
R
G
F
P
L
A
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
40
HHSearch
39.10
12%
-358
- C5 -
-
2M8E
-
?
A:
[17-49]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
I
V
----
D
--
L
-
H
K
-
S
G
--------
S
S
--
L
G
A
I
------------------
S
K
R
L
----------------
K
V
P
R
----
S
S
V
Q
T
I
V
R
K
Y
K
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
33
HHSearch
37.83
19%
-23
- C5 -
-
2RN7
-
?
A:
[6-56]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
R
F
S
P
E
V
R
Q
-
R
A
V
----
R
--
M
-
V
L
-
E
S
Q
G
E
Y
DS
Q
W
A
T
--
I
C
S
I
------------------
A
P
K
I
----------------
G
C
T
P
----
E
T
L
R
V
W
V
R
Q
H
E
-----------
R
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
30
HHSearch
36.55
16%
-188
- C5 -
-
2K27
-
PAX8_HUMAN
A:
[24-67]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
R
P
L
P
E
V
V
R
Q
-
R
I
V
----
D
--
L
-
A
H
-
Q
G
--------
V
R
--
P
C
D
I
------------------
S
R
Q
L
R
----------------
V
S
H
----
G
C
V
S
K
I
L
G
R
Y
Y
-----------
E
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
7
PsiBlast_PDB
36.41
24%
39
- C5 -
-
5HLA
1
PBPB_ECOLI
A:
[128-275]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
N
-
M
E
N
-------
N
R
Q
F
-
G
F
F
R
L
D
P
R
LIT
M
I
S
S
P
N
G
E
Q
R
L
F
V
P
R
S
G
F
P
----
D
L
L
V
D
T
L
-----------
L
A
T
-
E
D
R
----
H
--
F
-
Y
E
---------------------------------------------------------------------
T
L
T
Q
Q
L
V
-----------
K
--
N
L
F
---
L
S
----------
K
A
N
E
------------
A
---
Y
M
A
L
I
M
D
A
R
Y
S
K
D
R
I
-
L
----
E
L
Y
M
N
E
V
Y
L
G
----------
Q
----------
S
G
D
N
E
I
R
G
F
P
L
A
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
22
HHSearch
35.60
13%
-128
- C5 -
-
2ELH
-
DAN_DROME
A:
[21-67]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
R
S
L
T
P
R
D
K
I
-
H
A
I
----
Q
--
R
-
I
H
-
D
G
--------
E
S
--
K
A
S
V
------------------
A
R
D
I
----------------
G
V
P
E
----
S
T
L
R
G
W
C
K
N
E
D
-----------
K
L
R
F
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
35
HHSearch
35.44
13%
-184
- C5 -
-
1TC3
2
TC3A_CAEEL
C:
[16-45]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
V
--
M
-
K
L
-
L
N
--------
V
S
--
L
H
E
M
------------------
S
R
K
I
----------------
S
R
S
R
----
H
C
I
R
V
Y
L
K
D
P
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
10
PsiBlast_PDB
35.20
28%
36
- C5 -
-
4YSC
-
NIR_ALCFA
A:
[157-228]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
R
E
G
L
H
-
D
G
K
-------
G
K
A
L
-
T
Y
D
K
-------
I
Y
Y
V
--
G
E
Q
D
F
Y
V
P
R
D
E
N
G
----
K
Y
K
K
Y
E
A
P
GD
A
Y
E
D
T
V
K
V
M
R
T
L
T
P
T
----
H
--
V
-
V
F
-
N
G
--------
A
V
--
G
A
L
T
------------------
G
D
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
13
PsiBlast_PDB
34.99
28%
45
- C5 -
-
5D4I
-
NIR_ALCFA
A:
[157-228]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
R
E
G
L
H
-
D
G
K
-------
G
K
A
L
-
T
Y
D
K
-------
I
Y
Y
V
--
G
E
Q
D
F
Y
V
P
R
D
E
N
G
----
K
Y
K
K
Y
E
A
P
GD
A
Y
E
D
T
V
K
V
M
R
T
L
T
P
T
----
H
--
V
-
V
F
-
N
G
--------
A
V
--
G
A
L
T
------------------
G
D
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
16
PsiBlast_PDB
34.77
28%
37
- C5 -
-
5F7B
-
NIR_ALCFA
A:
[157-228]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
R
E
G
L
H
-
D
G
K
-------
G
K
A
L
-
T
Y
D
K
-------
I
Y
Y
V
--
G
E
Q
D
F
Y
V
P
R
D
E
N
G
----
K
Y
K
K
Y
E
A
P
GD
A
Y
E
D
T
V
K
V
M
R
T
L
T
P
T
----
H
--
V
-
V
F
-
N
G
--------
A
V
--
G
A
L
T
------------------
G
D
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
41
HHSearch
33.86
17%
19
- C5 -
-
5WUQ
-
SIGW_BACSU
A:
[139-181]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
D
K
Y
R
-
T
V
I
----
V
--
L
K
Y
I
-
D
E
--------
L
S
--
L
I
E
I
------------------
G
E
I
L
N
----------------
I
P
V
----
G
T
V
K
T
R
I
H
R
G
R
-----------
E
A
L
R
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
14
PsiBlast_PDB
33.74
28%
66
- C5 -
-
5D4J
5
NIR_ALCFA
A:
[157-228]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
R
E
G
L
H
-
D
G
K
-------
G
K
A
L
-
T
Y
D
K
-------
I
Y
Y
V
--
G
E
Q
D
F
Y
V
P
R
D
E
N
G
----
K
Y
K
K
Y
E
A
P
GD
A
Y
E
D
T
V
K
V
M
R
T
L
T
P
T
----
H
--
V
-
V
F
-
N
G
--------
A
V
--
G
A
L
T
------------------
G
D
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------