@TOME V2.3
(Mar 2018)
Ref.
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Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
Show Ligands of Templates
Complexes Affinity Score
Main Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Complexes Tab
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : I3TZF7: (2017-12-16 )
MSKNSKGFLTILLAFIGYMLVGLLKSYSNELLNFSTFINDTLVPSLFFIVFFAVGYFIIKI
Atome Classification :
(19 SA)
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------.........10..-------......20....----....30..---------..--...-------.-40........50........60--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
(Atome)
(Ident)
(Tito)
(Num)
(QMean)
(Ligand)
(Uniprot)
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MSKNS
K
G
F
L
T
I
L
L
-------
A
F
I
G
Y
M
L
V
G
L
L
K
----
S
Y
S
N
E
L
L
N
---------
F
S
--
T
F
I-------N-D
T
L
V
P
S
L
F
F
I
V
F
F
A
V
G
Y
F
I
I
KI--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
19
Fugue
71.55
22%
-81
- C5 -
-
5JRC
-
?
A:
[34-219]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SMLPN
L
D
N
L
K
E
E
Y
Q
K
L
E
E
K
K
Q
E
I
V
D
R
S
I
R
M
S
K
L
S
K
S
L
I
Y
S
M
I
R
ED
Y
K
S
A
D
K
Y
K
E
E
L
T
N
L
A
K
----
T
Q
I
E
E
L
K
K
---------
Y
P
--
M
F
Y
-------
S
-
N
G
F
I
G
L
Q
E
Y
V
E
A
L
A
L
Y
Y
Y
I
K
E
N
R
I
P
S
KEELGVD
T
W
V
Y
L
F
G
I
G
D
I
A
G
E
I
L
R
K
S
S
E
E
L
I
K
GN
I
E
Y
A
K
K
A
K
Q
D
L
E
S
L
Y
L
D
L
L
Y
I
ELKN
F
D
L
R
R
K
L
D
Y
V
S
N
I
I
N
K
L
I
E
F
I
I
W
KSK---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
14
Fugue
60.23
20%
24
- C5 -
-
5AGA
1
DPOLQ_HUMAN
A:
[3-827]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DKLLLANWGLP
K
A
V
L
E
K
Y
H
SFGVKKMF
E
W
Q
A
E
C
L
L
LGQVLE
G
K
N
L
V
Y
S
A
P
T
SAG
K
T
L
V
A
E
L
L
I
L
K
R
V
L
E
MR
K
K
A
L
F
I
L
PF
V
S
V
A
K
E
K
K
Y
Y
L
Q
S
L
F
-------
Q
E
V
G
I
K
V
D
G
Y
M
G
----
S
T
S
P
S
R
-
H
---------
F
S
--
S
L
---------------
D
I
A
V
C
T
I
E
R
A
N
G
L
I
N
R
L
I
E
E
NKMDLLG
M
V
V
V
D
ELHMLGDSHR
G
Y
L
L
E
L
L
L
T
K
I
C
Y
I
T
R
K
S
A
S
CQADSNA
V
Q
I
V
G
M
S
A
TLPN
L
E
L
V
A
S
W
L
N
A
E
L
Y
H
T
DFRPVPLL
E
S
V
K
V
GN
S
I
Y
D
SSMKLVREFEPM
L
Q
V
K
G
DEDH
V
V
S
L
C
Y
E
T
I
C
D
N
H
S
V
L
L
F
C
PS
K
K
W
C
E
K
L
A
D
I
I
A
R
E
F
Y
N
L
H
H
QASECPPVILE
Q
K
E
L
L
E
V
M
D
Q
L
R
R
LPSGLD
S
V
L
Q
K
TVPWG
V
A
F
H
H
AGLT
F
E
E
R
D
I
I
E
G
A
F
R
Q
GLIR
V
L
A
A
T
STLSSG
V
N
L
P
A
R
R
V
I
I
RTPIFGGRPLD
I
L
T
Y
K
Q
M
V
G
R
AGRKGVDT
V
G
E
S
I
L
I
C
K
NSE
K
S
K
G
I
A
L
L
Q
G
S
L
K
P
VRSCLQRGEEVT
G
S
M
I
R
A
I
L
E
I
I
V
G
GVAST
S
Q
D
M
H
T
Y
A
A
C
T
F
L
A
A
S
MG
A
I
E
A
C
V
M
W
L
L
E
N
EF
I
Q
S
T
EE
G
K
V
Y
H
P
T
H
L
G
S
A
T
L
S
S
SLS
P
A
D
T
L
D
I
F
A
D
L
Q
R
A
M
K
GFVLEND
L
H
I
L
Y
L
V
TPMFEDWTTID
W
Y
R
F
F
C
L
W
E
K
LP
T
S
M
K
R
V
A
E
L
V
GVE
E
G
F
L
A
R
C
V
K
GKVVARTERQHR
Q
M
A
I
H
K
R
F
F
T
S
L
V
L
L
D
L
I
S
EVP
L
R
E
I
N
Q
K
Y
GCN
R
G
Q
I
Q
S
L
Q
Q
S
A
A
V
Y
A
G
M
I
T
V
F
S
N
R
L
GW
H
N
M
E
L
L
L
SQF
Q
K
R
L
T
F
GIQRELCDLVRVSLLN
A
Q
R
A
R
V
L
Y
A
S
GFHT
V
A
D
L
A
R
AN
I
V
E
V
E
V
I
L
K
N
A
VPFKSARKEAVEERRNMRT
I
W
V
T
GRKGLT
E
R
E
A
A
A
L
I
V
E
E
A
R
M
I
L
Q
Q
D
L
12
Fugue
56.94
29%
-67
- C2 -
-
5MT2
2
?
A:
[28-379]
KVT
Q
E
R
M
E
Q
I
Y
E
E
V
KTPYKYGLAVAPTDNYHKI
D
C
P
T
V
F
R
Q
GD
K
W
L
M
T
Y
V
V
Y
NGKTGTDGR
G
Y
E
T
W
I
A
E
S
DNLL
D
W
R
T
LGRVLSYRDGKWDCN
Q
R
G
G
F
P
A
LPDMEWGGSY
E
L
Q
T
Y
KG
R
H
W
M
T
Y
IGGEGTGYEAVK
A
P
L
F
V
G
L
A
S
T
KGDISTA
H
E
W
E
S
L
DKPILSIHDKDAQWWEKLTQ
Y
K
S
T
V
Y
WDKDKTLGAP
F
V
M
F
Y
N
A
G
G
R
HPETD
L
K
G
E
R
V
G
I
A
L
S
KDMK
T
W
K
R
YPGNPV
F
A
H
E
A
DGTITGD
A
H
I
Q
K
MGD
V
Y
V
M
F
Y
F
S
A
FE
P
S
R
K
Y
K
A
F
N
T
F
A
A
-------------------------
S
Y
D
L
V
N
---------
W
T
--
D
W
H
-------
G
A
D
L
I
I
P
S
K
N
Y
D
E
L
F
A
H
K
S
Y
V
I
K
H
DG
V
V
Y
H
F
Y
C
A
V
N
NAEQ
R
G
I
A
I
A
T
SKPMGRSAVRFPKPET-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
20
Fugue
55.27
28%
-37
- C5 -
-
2N3G
-
DRB4_ARATH
A:
[1-72]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
D
H
V
Y
K
G
Q
L
Q
A
Y
A
-------
L
Q
H
N
L
E
L
----
P
----
V
Y
A
N
E
R
E
G
P
PH
A
P
R
F
R
C
N
V
--
T
F
C
-------
G
-
Q
T
F
Q
S
S
E
F
F
P
T
L
K
S
A
E
H
A
A
A
K
I
A
V
A
S
L
T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
15
Fugue
53.93
35%
-304
- C5 -
-
2AP7
-
BMNH5_BOMVA
A:
[1-20]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
I
I
G
P
V
L
-------
G
L
V
G
S
A
L
G
G
L
L
K
----
K
I
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
11
Fugue
52.73
11%
-46
- C5 -
-
2QSB
-
Y600_THEAC
A:
[5-89]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------V
R
V
D
Q
N
L
F
N
E
V
M
Y
L
L
D
E
L
S
Q
D
I
T
V
P
K
N
V
R
-------
K
V
A
Q
D
S
K
A
K
L
S
Q
----
E
N
E
S
L
D
L
R
---------
C
A
--
T
V
L
S
M
L
D
E
M
A
N
-
D
P
N
V
P
A
H
G
R
T
D
L
Y
T
I
I
S
K
L
E
A
L
S-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
6
HHSearch
45.51
32%
-14
- C5 -
-
5GJV
2
?
A:
[1280-1311]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
I
Y
-------
A
V
I
G
M
Q
M
F
G
K
I
A
LVDG
T
Q
I
N
R
N
N
N
---------
F
Q
--
T
F
P
-------
Q
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
5
HHSearch
44.72
32%
-48
- C5 -
-
5GJW
-
CAC1S_RABIT
A:
[1280-1311]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
I
Y
-------
A
V
I
G
M
Q
M
F
G
K
I
A
LVDG
T
Q
I
N
R
N
N
N
---------
F
Q
--
T
F
P
-------
Q
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
18
Fugue
42.87
36%
-207
* C5 *
-
2AP8
-
BMNH5_BOMVA
A:
[1-20]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
I
G
P
V
L
-------
G
L
V
G
S
A
L
G
G
L
L
K
----
K
I
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
13
Fugue
40.12
23%
102
- C5 -
-
5SZX
2
BZLF1_EBVB9
A:
[1-62]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------L
E
I
K
R
Y
K
N
R
V
A
S
R
K
S
R
A
K
F
K
Q
-------
L
L
Q
H
Y
R
E
V
A
A
A
K
----
S
S
E
N
D
R
L
R
---------
L
-----
L
-------
L
-
K
Q
M
C
P
S
L
------
D
V
D
S
I
I
P
R
T
PD------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
1
HHSearch
39.36
28%
-66
- C5 -
-
5N41
1
?
A:
[3-29]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
V
N
Q
K
E
I
E
I
A
I
E
-------
Y
F
K
N
Y
I
S
V
G
E
I
V
----
A
T
M
D
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
8
HHSearch
38.11
21%
-25
- C3 -
-
2CKZ
-
RPC8_YEAST
B:
[79-147]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
P
F
L
G
E
I
V
T
G
W
I
S
----
K
C
T
A
E
G
I
K
---------
V
S
LL
G
I
F
-------
D
-
D
I
F
I
P
Q
N
M
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2
HHSearch
36.73
17%
-283
- C5 -
-
4B19
-
?
A:
[2-25]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
L
I
F
V
-------
H
I
I
A
P
V
I
S
G
C
A
I
----
A
F
F
S
Y
W
L
S
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
10
HHSearch
34.62
21%
-180
- C5 -
-
2KV5
-
?
A:
[3-26]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
D
L
M
S
-------
L
V
I
A
P
I
F
V
G
L
V
L
----
E
M
I
S
R
V
L
D
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
3
HHSearch
31.29
25%
-183
- C5 -
-
3B8E
1
AT1B1_PIG
B:
[7-18]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
K
I
L
L
F
Y
V
I
F
Y
G
C
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
4
HHSearch
28.47
25%
-182
- C5 -
-
3B8E
1
D:
[7-18]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
K
I
L
L
F
Y
V
I
F
Y
G
C
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
17
Fugue
28.22
23%
-138
- C4 -
-
2L9Z
-
A:
[1-39]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
S
K
E
N
M
A
T
L
F
-------
T
-
I
W
C
T
L
C
D
R
A
Y
----
P
S
D
C
P
E
H
G
---------
P
V
--
T
F
V
-------
P
-
D
T
P
I
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
9
HHSearch
21.35
13%
11
- C5 -
-
2RLD
1
?
C:
[96-117]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Q
Y
E
S
I
N
N
D
S
-------
T
E
I
N
K
L
L
I
S
I
I
K
----
T
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
7
HHSearch
15.35
40%
-
- C1 -
-
2NCS
-
?
A:
[25-34]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
L
F
I
M
I
V
G
K
K
K
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------