@TOME V2.3
(Mar 2018)
Ref.
-
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Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
Show Ligands of Templates
Complexes Affinity Score
Main Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Complexes Tab
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : I3TZF9: (2017-12-16 )
MKKGESMKTTLVLFYKKHPYFTLLINILLASVIGISVEYLINKDFIGSCFYTALFLGLLEAFSIYKKSKK
Atome Classification :
(19 SA)
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------....-------.....-10-----....-....--------.20...---....-----.30...--.--.--...40.-.-.---...--..50--..---......60..---------------------.....-.70----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
(Atome)
(Ident)
(Tito)
(Num)
(QMean)
(Ligand)
(Uniprot)
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MKKG-------ESM
K
T
-
T
------
L
V
L
F
-YKKH--------
P
Y
F
T
L
L
---
I
N
I
L
-----
L
A
S
V
I
G
--
I
--
S
--
V
E
Y
L
IN-K-
D
---
F
I
G
--
S
C
F
Y
--
T
A
---
L
F
L
G
L
L
E
A
F
S
---------------------
I
Y
KKS-KK-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
15
Fugue
75.06
19%
-
- C2 -
-
4PU7
-
HIPB_SHEON
A:
[17-87]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LET
I
M
A
S
-------
P
L
N
Q
Q
-
S
------
L
G
L
L
-
I
K
E
R
--------
R
K
S
A
A
L
---
T
Q
D
V
-----
A
A
M
L
C
G
--
V
--
T
--
K
K
T
L
I
R
-
V
-
E
---
K
-
G
--
E
D
V
Y
--
I
S
---
T
V
F
K
I
L
D
G
L
G
---------------------
I
D
I
V
S
-
A
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
16
Fugue
72.96
22%
-66
* C2 *
-
1BW5
-
A:
[1-66]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
K
T
T
R
V
R
T
V
L
N
E
K
Q
L
H
-
T
------
L
R
T
C
-
Y
A
A
N
--------
P
R
P
D
A
L
---
M
K
E
Q
-----
L
V
E
M
T
G
--
L
--
S
--------------------
P
R
V
I
--
R
V
---
W
F
Q
N
K
R
C
K
D
K
---------------------
K
R
S
I
M
-
M
K
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
20
Fugue
67.50
18%
-59
- C2 -
-
2K0M
-
?
A:
[1-104]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MAKAQPIEIAGHE
F
A
R
K
-------
A
D
A
L
A
-
F
------
M
K
V
M
-
L
N
R
Y
RPG
D
I
V
S
T
V
D
G
A
F
L
---
V
E
A
L
K
R
HPD
A
T
S
K
I
G
--
P
--
G
--
V
R
N
F
E
V
-
R
-
S
---
A
D
Y
G
T
Q
C
F
W
--
I
L
---
R
T
D
G
S
E
E
R
F
S
---------------------
Y
K
K
C
V
-
L
E
HHHHHH-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
23
Fugue
64.17
20%
-56
- C2 -
-
3CO5
1
?
A:
[8-143]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GNS
A
A
I
Q
E
M
N
R
E
V
E
A
A
A
K
R
T
S
P
V
F
L
T
G
E
A
G
-------
S
P
F
E
T
-
V
------
A
R
Y
F
-
H
K
N
G
--------
T
P
W
V
------------------
S
P
--
A
--
R
--
V
E
Y
L
I
D
M
P
M
E
---
L
L
Q
--
K
A
E
G
--
G
V
---
L
Y
V
G
D
I
A
Q
Y
S
---------------------
R
N
I
Q
T
-
G
I
T
F
I
I
G
K
AERCR
V
R
V
I
A
S
C
S
Y
A
A
GSDS
C
E
E
K
L
A
G
L
FS
E
S
V
V
R
I
P
P
LS-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
21
Fugue
61.35
17%
-137
- C2 -
-
2KSL
-
TXI1_ERAAG
A:
[1-51]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
S
E
P
D
-------
E
I
C
R
A
-
R
------
M
T
---
H
K
E
F
--------
N
Y
K
S
N
V
---
C
N
G
C
-----
G
D
Q
V
A
A
--
C
--
E
--
A
E
-----------------
C
F
R
--
N
----------
D
V
Y
T
---------------------
A
C
H
E
A
-
Q
K
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
17
Fugue
55.84
23%
37
- C2 -
-
2PNN
1
TRPV1_RAT
A:
[11-258]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LYD
R
R
S
I
F
D
A
V
A
Q
SNCQELES
L
L
P
F
L
Q
R
S
KKRLTDSE
F
K
D
P
-------
E
T
G
K
T
-
C
------
L
L
K
A
M
L
N
L
H
--------
N
G
Q
N
D
T
---
I
A
L
L
-----
L
D
V
A
R
K
--
T
D-
S
--
L
K
Q
F
V
N
-
A
-
S
---
Y
T
D
--
S
Y
Y
K
GQ
T
A
---
L
H
I
A
I
E
---------------------------
R
R
N
M
T
L
V
T
L
L
V
E
N
GADVQAAANGDFFKKTKGR
P
G
F
Y
FGEL
P
L
S
L
A
A
C
T
NQ
L
A
I
V
K
F
L
L
Q
NSWQPADISARDSVGNT
V
L
H
A
L
V
E
V
ADNT
V
D
N
T
K
F
V
T
S
M
Y
N
E
I
L
I
L
G
A
K
L
HPTLKLEEITNRKGLT
P
L
A
L
A
A
S
S
GK
I
G
V
L
A
Y
I
L
Q
R
E
I
H-------------------------------------------------------------------------------------------------------------------------------------------------------
14
Fugue
53.83
25%
-57
- C- -
-
4G7X
-
?
A:
[3-94]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
I
N
C
D
-------
P
N
T
T
T
S
H
------
Q
L
L
F
-
G
F
G
S
--------
P
-----------
I
-----
V
Q
S
V
L
F
--
D
--
G
--
C
M
L
D
I
E
-
K
-
D
DYG
F
V
W
--
S
C
L
S
--
N
E
N
G
D
Y
C
K
G
L
Y
K
P
R
F
TQGVSPNWPMCDLSGASAE
R
C
I
Y
P
Y
C
-
P
E
GE---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
19
Fugue
53.47
17%
-81
- C2 -
-
1GQI
6
AGUA_CELJU
A:
[1-708]
EDGYDMWLRYQPIAD
Q
T
L
L
K
T
Y
Q
K
Q
I
R
H
L
H
V
AGDS
P
T
I
N
A
A
A
A
E
L
Q
R
G
L
S
G
L
L
N
K
P
I
V
A
R
DEKLKDYSL
V
I
G
T
PDNS
P
L
I
A
S
L
NLG
E
R
L
Q
A
L
GAE
G
Y
L
L
E
Q
T
R
I
NK
R
H
V
V
I
VAANS
D
V
G
V
L
Y
G
S
F
H
L
L
R
L
I
Q
T
QHALEK
L
S
L
S
S
A
P
RLQHR
V
V
N
H
WDNLNRVVERGYAGLSLWDWGSLPNYLA
P
R
Y
T
D
Y
A
R
I
N
A
S
L
GINGTVINNVNADPRVLS
D
Q
F
L
Q
K
I
A
A
L
A
D
A
F
RPYG
I
K
M
Y
L
S
I
N
FN
S
P
R
A
F
GDVDTADPLD
P
R
V
Q
Q
W
W
K
T
R
A
Q
K
I
Y
S
Y
I
P
DFG
G
F
L
V
KADSEGQPGPQGYGRD
H
A
E
G
A
N
M
L
A
A
A
L
KPFGGVVFWRAFVYHPDIEDRFRG
A
Y
D
E
F
M
P
L
D
-------
G
K
F
A
D
-
N
------
V
I
L
Q
-
I
K
N
G
--------
P
I
D
F
Q
P
REP
F
S
A
L
-----
F
A
G
M
S
R
T
N
M
--
M
--
M
E
F
Q
I
T
-
Q
-
E
---
Y
F
G
--
F
A
T
H
--
L
A
---
Y
Q
G
P
L
F
E
E
S
L
---------------------
K
T
E
T
H
-
A
R
GEGST
I
G
N
I
L
E
GKVFKTR
H
T
G
M
A
G
VINPGTDRNWTGH
P
F
V
Q
S
S
W
Y
A
F
G
R
M
A
W
DHQIS
A
A
T
A
A
D
E
W
L
R
M
T
FSNQ
P
A
F
I
E
P
V
K
Q
M
M
L
V
S
R
E
A
G
V
N
YRSPLGLTHLYSQGDHYGPAPWTDDLPRADWTAVYYHRASKT
G
I
G
F
N
RTKTGSN
A
L
A
Q
Y
P
E
P
I
A
K
A
W
G
DLNSVPEDLILWFHHLSWDHRMQSGRN
L
W
Q
E
L
V
H
K
Y
Y
Q
G
V
E
Q
V
R
A
M
Q
R
T
W
D
Q
Q
EAYVD
A
A
R
F
A
Q
V
K
A
L
L
Q
V
Q
E
R
E
A
V
R
W
R
N
S
C
V
L
Y
F
Q
S
V
A
GRPIPANYEQPEHD
L
E
Y
Y
K
M
L
A
R
T
TYVPEPWHPASSSRVLK
9
HHSearch
46.34
33%
-394
- C3 -
-
2BBY
-
T2FB_HUMAN
A:
[185-199]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
D
-
M
------
L
F
S
A
-
F
E
K
H
--------
Q
Y
Y
N
L
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
13
HHSearch
37.05
42%
-
- C3 -
-
5EH6
-
GLPA_HUMAN
A:
[71-95]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
P
E
I
T
L
I
---
I
F
G
V
-----
I
A
G
V
I
G
--
T
I
L
L
--
I
S
Y
G
I
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
1
HHSearch
34.16
17%
-20
- C3 -
-
2LOM
-
HIG1A_HUMAN
A:
[13-53]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
E
-------
E
D
Q
G
S
-
K
------
L
I
R
K
-
A
K
E
A
--------
P
F
V
P
V
G
---
I
A
G
F
-----
A
A
I
V
A
Y
--
G
--
L
--
Y
K
L
K
S
R
-
G
-
N
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
11
HHSearch
31.77
40%
69
- C3 -
-
1HTR
-
?
P:
[8-33]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
K
K
F
-------
K
S
I
R
E
-
T
MKEKGL
L
G
E
F
-
L
R
T
H
--------
K
Y
D
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
12
HHSearch
30.24
42%
37
- C3 -
-
5EH4
1
GLPA_HUMAN
C:
[1-26]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
E
--------
P
E
I
T
L
I
---
I
F
G
V
-----
I
A
G
V
I
G
--
T
IL
L
--
I
S
Y
G
I
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
5
HHSearch
28.18
19%
-97
- C- -
-
3L32
-
PHOSP_RABVR
B:
[108-123]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
R
S
G
-------
E
R
F
L
K
-
I
------
W
S
Q
T
-
V
E
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
8
HHSearch
25.42
10%
-210
- C3 -
-
2OAR
-
MSCL_MYCTU
A:
[24-57]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
L
K
-
G
------
F
K
E
F
-
L
A
R
G
--------
N
I
V
D
L
A
---
V
A
V
V
-----
I
G
T
A
F
T
--
A
--
L
--
V
T
K
F
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
7
HHSearch
24.97
50%
-
- C1 -
-
2LJC
1
?
B:
[10-19]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
V
V
-----
A
A
S
I
I
G
--
I
--
L
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
10
HHSearch
23.73
42%
149
* C3 *
-
2KPF
-
GLPA_HUMAN
B:
[69-87]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
S
E
--------
P
E
I
T
L
I
---
I
F
G
V
-----
M
A
G
V
I
G
--
T
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2
HHSearch
20.03
7%
-84
- C3 -
-
2LON
-
HIG1B_HUMAN
A:
[14-54]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
E
-------
D
C
V
S
E
-
K
------
L
L
R
K
-
T
R
E
S
--------
P
L
V
P
I
G
---
L
G
G
C
-----
L
V
V
A
A
Y
--
R
--
I
--
Y
R
L
R
S
R
-
G
-
S
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
4
HHSearch
17.85
29%
-118
- C3 -
-
2MUW
1
?
A:
[9-27]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
V
V
-----
A
A
S
I
I
G
--
I
--
L
H
L
I
L
W
I
L
D
-
R
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------