@TOME V2.3
(Mar 2018)
Ref.
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Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
Show Ligands of Templates
Complexes Affinity Score
Main Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Complexes Tab
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : I3TZH7: (2017-12-16 )
MIHKKFLLVESVLDSYMNVSTLEKVLETARHHLNVPSLLL
Atome Classification :
(20 SA)
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------.........10......---..20-------------........30........40---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
(Atome)
(Ident)
(Tito)
(Num)
(QMean)
(Ligand)
(Uniprot)
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MI
H
K
K
F
L
L
V
E
S
V
L
D
S
YM---
N
V
S
T
-------------
L
E
K
V
L
E
T
A
R
H
HLNVPSLLL----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
21
HHSearch
69.83
25%
-195
- C3 -
-
2EYI
-
ACTN1_HUMAN
A:
[203-222]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
T
N
-------------
L
N
T
A
F
D
V
A
E
K
Y
L
D
I
P
K
M
L
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
1
HHSearch
67.97
35%
-137
- C3 -
-
1IQO
-
?
A:
[55-80]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
F
L
S
S
Y
N
---
S
V
D
E
-------------
I
R
K
E
L
E
E
A
G
A
K
I
N
H
T
T
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
13
HHSearch
65.42
29%
-188
- C3 -
-
2K5S
-
YMOA_YERPE
A:
[11-31]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
R
K
C
T
---
T
I
D
T
-------------
L
E
R
V
I
E
K
N
K
Y
E
L
S
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
32
Fugue
64.26
20%
-126
- C3 -
-
4CZB
-
NAH1_METJA
A:
[1-415]
M
E
L
M
M
A
I
G
Y
L
G
L
A
L
V
L
G
S
L
V
A
K
I
A
E
K
L
KIPD
I
P
L
L
L
L
L
G
L
I
I
G
PFLQIIP
S
D
S
A
M
E
I
F
E
Y
A
G
P
I
G
L
I
F
I
L
L
G
G
A
F
T
MRISLLKRV
I
K
T
V
V
R
L
D
T
I
T
F
L
I
T
L
L
I
S
G
F
I
F
N
M
V
L
NLPYTS
P
V
G
Y
L
F
G
A
I
T
A
A
T
D
P
A
T
L
I
P
V
F
S
R
V
RTN
P
E
V
A
I
T
L
E
A
E
S
I
F
N
D
P
L
G
I
V
S
T
S
V
I
L
G
L
F
GLFSSSN
P
L
I
D
L
I
T
L
A
G
G
A
I
V
V
G
L
L
---
L
A
K
I
-------------
Y
E
K
I
I
I
H
C
D
F
H
E
Y
V
A
P
L
V
L
G
G
A
M
L
L
L
Y
V
G
DD
L
L
P
S
I
CG
Y
G
F
S
G
Y
M
A
V
A
I
M
G
L
Y
L
G
D
A
L
F
R
A
DDID
Y
K
Y
I
V
S
F
C
D
D
L
S
L
L
A
R
V
F
I
F
V
F
L
G
A
C
IK
L
S
M
L
E
N
Y
F
I
P
G
L
L
V
A
L
G
S
I
FL
A
R
P
L
G
V
F
L
G
L
I
GSKHS
F
K
E
K
L
Y
F
A
L
E
G
P
R
G
V
V
P
A
A
L
A
V
T
V
G
I
E
I
L
K
N
ADKIPA
S
I
T
K
Y
IT
P
T
D
I
A
G
T
I
I
I
G
T
F
M
T
I
L
L
S
V
I
L
E
A
S
W
A
G
M
L
A
L
K
L
LGE----------------------------------------------------------------------------------------------------
29
Fugue
59.23
27%
-33
- C3 -
-
4ZMU
-
?
A:
[5-345]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MLA
C
P
L
P
P
D
E
A
L
R
Q
Q
A
L
D
D
M
A
---
L
V
D
T
PAE
H
Y
--------
L
D
A
L
V
E
L
A
R
E
T
F
G
V
K
T
V
L
I
SLIDHD
R
Q
W
F
KARIGLDAEQTPRDLS
F
C
G
H
A
I
LAS
E
P
L
M
V
TDASRDPRFHDNPLVTGPPFIR
F
Y
A
G
E
P
L
H
A
SNGQAI
G
T
L
C
L
I
D
P
S
P
R
L
L
D
L
R
E
G
R
Q
L
N
R
L
S
I
L
A
E
G
Y
L
Q
L
R
S
L
T
E
H
T
R
F
L
R
Q
EIDREQRKSLLDPLTQLWN
R
A
G
F
H
A
L
H
Q
H
E
L
E
L
A
R
A
S
D
Q
R
I
G
I
I
Y
S
D
I
D
H
F
K
R
I
N
D
T
L
G
H
R
A
G
D
S
V
L
R
E
A
A
S
R
L
R
A
A
L
RPE
D
L
L
A
R
F
G
GE
E
F
V
A
M
V
R
V
RE
T
T
E
L
T
M
I
A
N
R
I
R
E
L
M
E
A
T
P
I
D
CAG
T
S
V
P
V
T
I
S
A
G
C
T
L
A
G
SGEE
P
E
R
A
L
A
R
A
D
A
A
L
Y
D
A
K
R
A
GRN
R
V
V
S
V
3
HHSearch
58.79
29%
-107
- C3 -
-
1JW2
-
HHA_ECOLI
A:
[16-36]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
R
R
C
Q
---
T
I
D
T
-------------
L
E
R
V
I
E
K
N
K
Y
E
L
S
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
28
Fugue
58.60
27%
36
- C3 -
-
1Y8C
-
?
A:
[1-246]
---------------------------------------------------------------------------------------NC
Y
N
K
F
A
H
I
Y
D
K
L
IRADVD
Y
K
K
W
S
D
F
I
I
E
K
C
V
E
N
NLVFD
D
Y
L
D
L
ACGTG
N
L
T
E
N
L
CPKFK
N
T
W
A
V
D
LS
Q
E
M
L
S
E
A
E
N
K
F
R
S
Q
G
L
K
P
R
L
A
C
Q
D
ISNL
N
I
N
R
K
F
D
L
I
T
C
C
L
D
S
T
N
YII
D
S
D
D
-------------
L
K
K
Y
F
K
A
V
S
N
H
L
K
E
G
G
V
F
I
F
D
I
N
S
Y
Y
K
L
S
QVLGN
N
D
F
N
Y
D
D
DE
V
F
Y
Y
W
E
N
Q
F
E
DD
L
V
S
M
Y
I
S
F
F
V
R
DGE
F
Y
K
R
F
D
E
E
H
E
E
R
AYK
E
E
D
I
E
K
Y
L
K
H
G
QLNIL
D
K
V
D
CYSNKKVEKFTE
R
I
T
Y
L
V
K
LGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
30
Fugue
56.54
17%
-69
* C2 *
-
2MNY
-
A:
[1-55]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------AVDLYVCLLCGSG
N
D
E
D
R
L
L
L
C
D
G
C
D
D
S
Y
H
---
T
F
C
L
-------------
I
P
P
L
H
D
V
P
K
G
D
W
R
C
P
K
C
L
A
Q
E--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
6
HHSearch
54.76
29%
-
- C3 -
-
4ICG
-
HHA_SALTY
C:
[16-36]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
R
R
C
Q
---
T
I
D
T
-------------
L
E
R
V
I
E
K
N
K
Y
E
L
S
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
24
Fugue
51.31
17%
-47
- C3 -
-
4QND
6
SWEET_VIBSN
A:
[5-101]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------M
A
L
I
E
R
I
G
K
A
L
E
P
L
M
L
V
M
G
L
I
S
P
L
A
---
T
M
P
Q
-------------
L
Y
K
L
Y
V
S
H
S
E
H
A
L
G
L
S
L
T
T
W
L
L
Y
S
F
I
A
L
L
W
T
I
Y
G
I
Y
H
KNPTI
W
V
G
N
C
L
G
F
L
M
Y
V
A
M
V
V
G
I
I
A
H
TGGTY---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
8
HHSearch
48.61
29%
-
- C3 -
-
2QDQ
-
A:
[2503-2523]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
A
A
Q
E
---
E
M
L
R
-------------
K
E
R
E
L
E
E
A
R
K
K
L
A
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
14
HHSearch
47.79
19%
-79
- C3 -
-
2JQT
-
CNU_ECOLI
A:
[11-31]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
R
K
I
S
---
S
L
E
S
-------------
L
E
K
L
Y
D
H
L
N
Y
T
L
T
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
18
HHSearch
47.33
35%
-1
- C3 -
-
1M8P
-
MET3_PENCH
B:
[53-72]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
S
P
L
E
G
F
M
---
N
Q
A
D
-------------
Y
D
R
V
C
E
D
N
R
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
19
HHSearch
43.55
26%
-10
* C3 *
-
2HJ0
-
?
B:
[454-484]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
P
D
L
I
E
Y
F
K
D
L
K
V
---
P
Q
L
T
-------------
I
E
E
L
K
E
K
A
Y
A
I
V
G
N
P
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
17
HHSearch
43.43
26%
-66
- C3 -
-
3GKU
-
?
A:
[8-28]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
A
K
T
-------------
V
E
E
A
V
T
K
A
L
I
E
L
Q
T
T
S
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
12
HHSearch
41.67
14%
-36
- C3 -
-
1V47
-
?
A:
[27-47]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
F
P
V
K
G
F
M
---
T
R
E
E
-------------
A
L
S
V
A
H
E
M
R
L
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
22
HHSearch
40.90
25%
-37
- C3 -
-
1R6X
-
MET3_YEAST
A:
[53-72]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
S
P
L
T
G
F
L
---
N
E
N
D
-------------
Y
S
S
V
V
T
D
S
R
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
11
HHSearch
40.25
14%
-36
- C3 -
-
1V47
-
?
B:
[27-48]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
F
P
V
K
G
F
M
---
T
R
E
E
-------------
A
L
S
V
A
H
E
M
R
L
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
31
Fugue
39.36
20%
-41
- C2 -
-
1D6G
1
CCKAR_HUMAN
A:
[1-47]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
D
V
V
D
S
L
L
V
N
G
S
---
N
I
T
P
P
C
E
L
GLENETLFC
L
D
Q
P
R
P
S
K
E
W
Q
P
A
Q
V
I
L
L
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
23
HHSearch
36.90
28%
-10
- C3 -
-
3PF6
-
?
D:
[16-33]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Y
P
---
T
H
P
S
-------------
T
K
D
A
L
E
E
A
R
L
L
F
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------