@TOME V2.3
(Mar 2018)
Ref.
-
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Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
Show Ligands of Templates
Complexes Affinity Score
Main Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Complexes Tab
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : I3U287: (2017-12-22 )
MSCTTEGTDEKEVIFYFEVSTLFVVNNLEQTQNASTVIYQ
Atome Classification :
(19 SA)
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------.........10........20........30........40------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
(Atome)
(Ident)
(Tito)
(Num)
(QMean)
(Ligand)
(Uniprot)
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MSCTTEGTDE
K
E
V
I
F
Y
F
E
V
S
T
L
F
V
VNN
L
E
QTQNA
S
T
V
IYQ-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
19
Fugue
60.22
28%
-82
- C8 -
-
5FZP
6
DAIP_STRMB
A:
[2-345]
------------------------------------------------------------------------------------------------------------------------------DSTSGWRAPSCTKVTGDGA
V
T
F
T
TDDGATLAPTT
G
T
L
Q
S
VSYTH
G
L
V
A
L
DTPN
T
L
L
A
T
HND
E
L
Q
R
S
TDAGC
T
W
T
K
VATLGSG
S
T
W
L
T
A
A
T
GG
R
A
F
A
W
E
K
NGG
Y
L
A
R
V
D
GR
T
V
T
K
L
S
S
PSADIV
G
V
G
T
D
KARRD
H
V
R
L
A
G
SDG
Q
L
Y
D
S
TDAGA
T
W
K
P
L
G
KLAFGPGASVY
T
V
S
F
DPADLD
H
A
V
A
G
G
M
TT
G
G
A
V
T
TDGGA
T
W
T
A
A
T
GLSATAG
G
K
S
N
LF
A
A
S
V
S
PADRN
V
V
Y
A
L
G
I
DLVEAAPNSGAEG
R
H
L
Y
R
S
TDGGR
T
Y
T
R
I
V
DDTPDTELT
N
S
T
L
L
A
P
S
P
V
D
P
N
V
L
Y
F
E
Y
G
T
Y
F
--------
Q
A
Y
G
T
D
L
Y
R
Y
D
ARTG
K
V
G
K
T
H
N
AHDGIS
A
I
A
F
NPARPS
V
M
Y
L
G
L
E
E
V
Q----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
12
Fugue
58.55
36%
-118
- C10 -
-
5ANB
-
EFL1_HUMAN
K:
[1-1120]
MVLNS
L
D
K
M
I
Q
L
Q
K
NTAN
I
R
N
I
C
VLAHVDHG
K
T
T
L
A
D
C
L
I
S
S
NGIIS
S
R
L
A
G
KLRYMDSR
E
D
E
Q
I
R
GIT
M
K
S
S
A
I
S
L
H
Y
A
TGN
E
E
Y
L
I
NLIDSPGHVDFS
S
E
V
S
T
A
V
R
I
C
D
G
C
I
I
V
V
D
AVEGVC
P
Q
T
Q
A
V
L
R
Q
A
W
L
E
N
I
R
P
V
L
V
I
N
KIDRLIVELKFT
P
Q
E
A
Y
S
H
L
K
N
I
L
E
Q
I
N
A
L
T
G
T
LFTS
K
V
L
E
E
R
A
E
RETESQVN
P
N
S
E
Q
G
E
Q
V
Y
DWSTGLEDTDDSHLYFSPEQGN
V
V
F
T
S
A
IDG
W
G
F
G
I
E
H
F
A
R
I
Y
S
Q
K
IGIK
K
E
V
L
M
K
TLW
G
D
Y
Y
I
NMKAKKIMKGDQAKGKKPLFVQL
I
L
E
N
I
W
S
L
Y
D
A
V
L
K
KDK
D
K
I
D
K
I
V
T
S
LGLKIGAREARHSDPK
V
Q
I
N
A
I
C
SQWLPISHA
V
L
A
M
V
C
QKLPSPLDITAERVERLMCTGSQTFDSFPPETQ
A
L
K
A
A
F
M
K
C
G
S
E
D
T
--
A
P
V
I
I
F
--
V
S
K
M
F
A
V
D
A
K
A
L
P
Q
N
K
P
R
P
L
T
Q
EE
I
A
Q
R
R
E
R
A
R
QRHAE
K
L
A
A
A
Q
GQAPLEPTQDGSAIETCPKGEEPRGDEQQVESMTPKPVLQ
E
E
N
N
QES
F
I
A
F
A
R
V
FSGVARRG
K
K
I
F
V
L
G
PKY
S
P
L
E
F
L
RRVPLGFSAPPDGL
P
Q
V
P
H
M
A
Y
C
A
L
ENLYLLMG
R
E
L
E
Y
L
EEVPP
G
N
V
L
G
I
G
GLQDFVLKSATLCSLPSCPPFIP
L
N
F
E
A
TPI
V
R
V
A
V
E
P
KHPSE
M
P
Q
L
V
K
G
M
K
L
L
N
Q
A
DPCVQILIQETGE
H
V
L
V
T
AG
E
V
H
L
Q
R
C
L
D
D
L
K
ERFAK
I
H
I
S
V
S
E
P
I
I
P
F
R
E
T
I
TKPPKVDMVNEEIGKQQKVAVIHQMKEDQSKIPEGIQVDSDGLI
T
I
T
T
PNKL
A
T
L
S
V
R
A
M
P
LP
E
E
V
T
Q
I
L
E
E
NSDLIRSMEQLTSSLNEGE
N
T
H
M
I
H
Q
K
T
QEKIWEFKGK
L
E
Q
H
L
T
GRR
W
R
N
I
V
DQIWSFGPRKCGP
N
I
L
V
N
KSEDFQNSVWTGPADKASKEASRYRDLG
N
S
I
V
S
G
F
Q
L
A
T
L
S
GPMC
E
E
P
L
M
G
V
C
F
V
L
EKWDLSKFEEQGA
S
D
L
A
K
E
G
Q
E
E
N
E
T
C
S
GGNENQELQDGCS
E
A
F
E
K
RTSQKGESPLTDCYGPF
S
G
Q
L
I
A
T
M
K
E
A
C
R
Y
A
L
Q
V
K
P
Q
R
L
MAA
M
Y
T
C
D
I
M
A
T
GDV
L
G
R
V
Y
A
V
L
S
K
R
EGRVL
Q
E
E
M
K
EGTD
M
F
I
I
K
A
V
L
P
VAESFG
F
A
D
E
I
R
K
R
TSGL
A
S
P
Q
L
V
F
S
H
W
E
I
I
P
S
D
P
F
W
V
PTT
E
E
E
Y
L
H
FGEKADSENQARKYMNAVRKRKGLYV
E
E
K
I
V
E
HAEKQRTLSKNK
13
Fugue
48.84
17%
-231
- C- -
-
4G7X
-
?
A:
[3-94]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
I
N
C
D
P
N
T
T
T
S
H
Q
L
L
F
G
F
G
------------
S
P
I
V
Q
S
V
L
F
D
G
C
M
L
D
I
E
K
D
DYGFV
W
S
C
L
S
NEN
G
D
Y
C
K
G
L
Y
K
P
R
FTQGVSPNWPMCDLSGASAE
R
C
I
Y
PYCPEGE---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
7
HHSearch
42.01
75%
-136
- C4 -
-
5F1B
-
VGP_EBOZ5
A:
[135-142]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
L
A
S
T
V
I
Y
R
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
9
HHSearch
38.17
100%
-
- C6 -
-
5HJ3
-
?
C:
[151-156]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
A
S
T
V
I
Y
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
16
Fugue
35.97
15%
-59
- C11 -
-
2MV6
-
A:
[1-49]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MSEPVSLLT
P
S
D
L
D
P
L
I
L
T
L
S
L
I
L
V
V
I
L
V
L
L
T
V
L
A
L
L
S
H
R
R
A
L
K
Q
K
I
W
P
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
17
Fugue
35.01
14%
-212
- C11 -
-
1SRB
-
A:
[1-21]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
C
S
C
K
D
M
T
D
K
E
C
L
Y
F
C
H
Q
D
V
I
W
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
8
HHSearch
31.44
71%
-
- C5 -
-
3WMI
-
?
B:
[590-596]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
R
N
N
L
E
Q
S
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
18
Fugue
30.98
14%
31
* C12 *
-
2M2Q
-
?
A:
[1-32]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAG
K
S
C
N
I
L
G
S
D
P
C
D
A
------------
G
C
F
C
L
P
V
G
I
V
A
G
V
C
V
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
14
Fugue
29.29
16%
-11
* C11 *
-
2MC7
-
?
A:
[1-30]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
N
R
S
P
D
K
I
I
A
L
I
F
L
L
I
S
L
L
V
L
C
L
A
L
W
Q
I
V
F
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
3
HHSearch
28.51
67%
-
- C1 -
-
3W1O
-
?
B:
[111-119]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
N
E
K
T
V
I
F
H
F
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
20
Fugue
28.43
13%
-21
- C12 -
-
1EWS
-
RK1_RABIT
A:
[1-32]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
P
C
S
C
K
K
Y
C
D
P
----------
W
E
V
I
D
G
S
C
G
L
F
N
S
K
Y
I
C
C
R
EK-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
11
Fugue
24.95
16%
150
- C9 -
-
2QTV
-
D:
[9-44]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
V
S
G
Q
T
P
H
L
N
R
K
A
N
D
G
W
N
D
L
P
L
----
K
V
K
E
K
P
S
R
A
K
A
V
S
V
A
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
15
Fugue
24.14
18%
-
- C11 -
-
3IM4
-
C:
[11-37]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
D
E
A
Q
E
E
L
A
W
K
I
A
K
M
I
V
S
D
V
M
Q
Q
A
Q
Y
D
Q
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
5
HHSearch
22.62
20%
-
- C3 -
-
5JK2
-
Y751_TREPA
E:
[75-84]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
E
H
A
E
I
T
F
S
R
A
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
4
HHSearch
17.86
50%
139
- C2 -
-
4OKV
-
?
F:
[238-247]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
H
C
G
S
E
G
T
R
E
L
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2
HHSearch
17.85
33%
-
- C13 -
-
4MP0
-
D:
[17-28]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
K
L
R
E
Y
F
Y
F
E
L
D
E
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
1
HHSearch
15.97
33%
-
* C13 *
-
4MOY
-
B:
[17-28]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
K
L
R
E
Y
F
Y
F
E
L
D
E
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
10
HHSearch
10.84
50%
-
- C7 -
-
2MX0
-
?
A:
[32-41]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
K
R
S
I
F
Y
F
A
P
T
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------