@TOME V2.3
(Mar 2018)
Ref.
-
-
Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
Show Ligands of Templates
Complexes Affinity Score
Main Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Complexes Tab
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : Q3XWZ7: (2018-01-01 )
MAQRIPQEVIETVRSQTNIVEVIGQYVQLKKSGKNYLGLCPFHEERTPSFSVAEDKQIFHCFGCGKGGNVFTFLQELEGLSFPEAVVKVADFEQIPLEDQWRQRTIAVQNPESATGKLIAAHEKAAEIYHHMLLHTKAGQPALEYLQSRGLSLELIEEFNIGFAPNERSFLQQVFKNESISNELLERSGLFVTHDDGRMSDRFYQRVMFPLRNSQGQTIGFSGRWLAPEKGQEKDQPKYLNSPETELFNKRQVLFNLDKARSDIRKNGEILLFEGFMDVIAAWQAGIKTGLASMGTSLTAQQIQQMEKLTKELVFCYDGDNAGFEATNRGIELLRQNSRLALSVVVVPEKLDPDEYLRKYGEASFQELVAHGRETVFTFKSRYLKQGKNLDNEKDKIEYLEELLVELSRVVSPIEQDMYLSQLSTEFQIGRETIQKQLRDLRRTNQQNRQEPQESQHTQVTRQETARKKRPLTQVEKAEQILLYRAFKEVSVRNILKEREFQFIHDAYAEVYFLFDAYVSQHYEFNLAEFLDFLQDENLRRLVVEIEYLPVAEESSPREIQDLLDVISKSGLADEITLKKQMQQEARRTGNKQLELELTIEIINLTKQLKQAK
Atome Classification :
(21 SA)
.........10........20........30........40........50........60........70........80........90------.........100.......110.......120.......130.......140.......150.......160.......170.......180.......190.-..-.-.-.-.200.......210.......220.......230.......240.......250.......260.......270.......280.......290.......300.......310.......320.....-..330--...---.--...340..--.....350.......360.......370.-......380.......390.......400.......410.......420.......430.......440.......450.......460.......470.......480.......490.......500.......510.......520.......530.......540.......550.......560.......570.......580.......590.......600.......610.
(Atome)
(Ident)
(Tito)
(Num)
(QMean)
(Ligand)
(Uniprot)
MAQR
I
P
Q
E
V
I
E
T
V
RSQT
N
I
V
E
V
I
G
Q
Y
V
Q
L
K
KSGKN
Y
L
GLCPFHEERTPSFSVAED
K
Q
I
F
H
C
F
GCGKGG
N
V
F
T
F
L
Q
E
LEGLS
F
P
E
A
V
V
K
VA-------DFEQIP
L
E
D
Q
WRQ
R
T
I
A
V
QNPESATG
K
L
I
A
A
H
E
K
A
A
E
I
Y
H
H
M
L
LHTKAG
Q
P
A
L
E
Y
L
Q
SRGLS
L
E
L
I
E
EFNIGFAP
N
E
R
S
F
L
Q
Q
V
F
KNE
S
I
S
N
E
L
L
E
RS
G
L
F
V
T-HD-D-G-R-
M
S
D
R
F
Y
Q
R
V
M
F
P
LRNSQG
Q
T
IGFSGRWLAPEKGQEKDQPKYLNSP
E
T
E
L
F
N
K
R
Q
V
L
F
N
L
D
K
A
R
S
D
I
RKNG
E
I
L
L
F
E
G
F
M
D
V
I
A
A
W
Q
A
G
I
K
T
G
L
A
S
MGT
S
L
T
A
Q
Q
I
Q
Q
M
E
K
L
T
K
E
L
V
F
C
YDGDNAG
F
E
A
T
-
N
R
G
I
E
--
L
L
R---Q--NS
R
L
A
L
S
V
--
V
V
VPEKL
D
P
D
E
Y
L
R
K
Y
G
E
A
S
F
Q
E
L
V
A
HGR-
E
T
V
F
T
F
K
S
R
Y
L
K
QGKNLD
N
E
K
D
K
I
E
Y
L
E
E
L
L
V
E
L
S
R
V
V
S
P
I
E
Q
D
M
Y
L
S
Q
L
S
T
E
F
QI
G
R
E
T
I
Q
K
Q
L
R
D
L
R
R
T
N
Q
QNRQEPQ
E
S
Q
H
T
Q
V
T
R
Q
E
T
A
RKKRP
L
T
Q
V
E
K
A
E
Q
I
L
L
Y
R
A
F
K
E
V
S
V
R
N
I
L
K
E
R
E
F
Q
F
I
H
D
A
Y
A
E
V
Y
F
L
F
D
A
Y
V
S
Q
HYEF
N
L
A
E
F
L
D
F
LQDE
N
L
R
R
L
V
V
E
I
E
Y
LPVAEES
S
P
R
E
I
Q
D
L
L
D
V
I
S
KSGLA
D
E
I
T
L
K
K
Q
M
Q
Q
E
A
R
RTGN
K
Q
L
E
L
E
L
T
I
E
I
I
N
L
T
K
Q
L
KQAK
23
HHSearch
87.05
31%
-107
* C4 *
-
2AU3
-
DNAG_AQUAE
A:
[3-405]
-----
M
S
S
D
I
D
E
L
R
R
E
I
D
I
V
D
V
I
S
E
Y
L
N
L
E
K
V
G
S
N
Y
R
T
N
C
P
F
H
P
D
D
T
P
S
F
Y
V
S
P
S
K
Q
I
F
K
C
F
G
C
G
V
G
G
D
A
I
K
F
V
S
L
Y
E
D
I
S
Y
F
E
A
A
L
E
L
A
-------
K
R
Y
G
K
K
L
D
L
E
K
I
S
----------
K
D
E
K
V
Y
V
A
L
D
R
V
C
D
F
Y
R
E
S
L
L
K
---
N
R
E
A
S
E
Y
V
K
S
R
G
I
D
P
K
V
A
R
K
F
D
L
G
Y
A
P
S
S
-
E
A
L
V
K
V
L
K
E
N
D
L
L
E
A
Y
L
E
T
K
N
L
L
S
P
-
T
--
K
-
G
-
V
-
Y
R
D
L
F
L
R
R
V
V
I
P
I
K
D
P
R
G
R
V
I
G
F
G
G
R
R
I
V
E
D
-----
K
S
P
K
Y
I
N
S
P
D
S
R
V
F
K
K
G
E
N
L
F
G
L
Y
E
A
K
E
Y
I
K
E
E
G
F
A
I
L
V
E
G
Y
F
D
L
L
R
L
F
S
E
G
I
R
N
V
V
A
P
L
G
T
A
L
T
Q
N
Q
A
N
L
L
S
K
F
T
K
K
V
Y
I
L
Y
D
G
D
D
A
G
R
K
A
M
-
K
S
A
I
P
--
L
L
L
---
S
---
A
G
V
E
V
Y
P
--
V
Y
L
P
E
G
Y
D
P
D
E
F
I
K
E
F
G
K
E
E
L
R
R
L
I
N
-
S
S
-
G
E
L
F
E
T
L
I
K
T
A
R
E
N
L
E
-----
E
---
K
T
R
E
F
R
Y
Y
L
G
F
I
S
D
G
V
R
R
F
A
L
A
S
E
F
H
T
K
Y
K
V
P
M
E
I
L
L
M
K
I
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
1
PsiBlast_PDB
84.41
41%
-36
- C4 -
-
5GUJ
-
DNAG_BACSU
A:
[1-320]
-----------------------------------------------------------------------------------------------------------------------
S
G
E
Q
K
M
A
E
A
H
E
L
L
K
K
F
Y
H
H
L
L
I
N
T
K
E
G
Q
E
A
L
D
Y
L
L
S
R
G
F
T
K
E
L
I
N
E
F
Q
I
G
Y
A
L
D
S
W
D
F
I
T
K
F
L
V
K
R
G
F
S
E
A
Q
M
E
K
A
G
L
L
I
R
-
R
E
-
D
-
G
-
S
G
Y
F
D
R
F
R
N
R
V
M
F
P
I
H
D
H
H
G
A
V
V
A
F
S
G
R
A
L
G
S
Q
------
Q
P
K
Y
M
N
S
P
E
T
P
L
F
H
K
S
K
L
L
Y
N
F
Y
K
A
R
L
H
I
R
K
Q
E
R
A
V
L
F
E
G
F
A
D
V
I
S
A
V
S
S
D
V
K
E
S
I
A
T
M
G
T
S
L
T
D
D
H
V
K
I
L
R
R
N
V
E
E
I
I
L
C
Y
D
S
D
K
A
G
Y
E
A
T
-
L
K
A
S
E
--
L
L
----
Q
--
K
K
G
C
K
V
R
V
--
A
M
I
P
D
G
L
D
P
D
D
Y
I
K
K
F
G
G
E
K
F
K
N
D
I
I
D
A
S
-
V
T
V
M
A
F
K
M
Q
Y
F
R
K
G
K
N
L
S
D
E
G
D
R
L
A
Y
I
K
D
V
L
K
E
I
S
T
L
S
G
S
L
E
Q
E
V
Y
V
K
Q
L
A
S
E
F
S
L
S
Q
E
S
L
T
E
Q
L
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
25
HHSearch
83.50
41%
-37
- C4 -
-
5GUJ
-
DNAG_BACSU
A:
[5-322]
---------------------------------------------------------------------------------------------------------------------------
K
M
A
E
A
H
E
L
L
K
K
F
Y
H
H
L
L
I
N
T
K
E
G
Q
E
A
L
D
Y
L
L
S
R
G
F
T
K
E
L
I
N
E
F
Q
I
G
Y
A
L
D
S
W
D
F
I
T
K
F
L
V
K
R
G
F
S
E
A
Q
M
E
K
A
G
L
L
I
R
-
R
E
D
G
-
S
-
G
-
Y
F
D
R
F
R
N
R
V
M
F
P
I
H
D
H
H
G
A
V
V
A
F
S
G
R
A
L
G
S
------
Q
Q
P
K
Y
M
N
S
P
E
T
P
L
F
H
K
S
K
L
L
Y
N
F
Y
K
A
R
L
H
I
R
K
Q
E
R
A
V
L
F
E
G
F
A
D
V
I
S
A
V
S
S
D
V
K
E
S
I
A
T
M
G
T
S
L
T
D
D
H
V
K
I
L
R
R
N
V
E
E
I
I
L
C
Y
D
S
D
K
A
G
Y
E
A
T
-
L
K
A
S
E
--
L
L
Q
---
K
---
K
G
C
K
V
R
V
--
A
M
I
P
D
G
L
D
P
D
D
Y
I
K
K
F
G
G
E
K
F
K
N
D
I
I
D
A
S
-
V
T
V
M
A
F
K
M
Q
Y
F
R
K
G
K
N
L
S
D
E
G
D
R
L
A
Y
I
K
D
V
L
K
E
I
S
T
L
S
G
S
L
E
Q
E
V
Y
V
K
Q
L
A
S
E
F
S
L
S
Q
E
S
L
T
E
Q
L
S
V
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------
7
PsiBlast_PDB
81.82
39%
-28
- C4 -
-
4EDT
2
DNAG_STAAU
A:
[7-321]
---------------------------------------------------------------------------------------------------------------------------
Q
M
I
E
M
H
E
L
I
Q
E
F
Y
Y
Y
A
L
T
K
T
V
E
G
E
Q
A
L
T
Y
L
Q
E
R
G
F
T
D
A
L
I
K
E
R
G
I
G
F
A
P
D
S
S
H
F
C
H
D
F
L
Q
K
K
G
Y
D
I
E
L
A
Y
E
A
G
L
L
S
R
-
N
E
-
E
-
N
F
S
-
Y
Y
D
R
F
R
N
R
I
M
F
P
L
K
N
A
Q
G
R
I
V
G
Y
S
G
R
T
Y
T
---
G
Q
E
---
P
K
Y
L
N
S
P
E
T
P
I
F
Q
K
R
K
L
L
Y
N
L
D
K
A
R
K
S
I
R
K
L
D
E
I
V
L
L
E
G
F
M
D
V
I
K
S
D
T
A
G
L
K
N
V
V
A
T
M
G
T
Q
L
S
D
E
H
I
T
F
I
R
K
L
T
S
N
I
T
L
M
F
D
G
D
F
A
G
S
E
A
T
L
K
T
G
Q
H
--
L
L
Q
---
Q
--
G
--
L
N
V
F
V
--
I
Q
L
P
S
G
M
D
P
D
E
Y
I
G
K
Y
G
N
D
A
F
T
T
F
V
K
N
D
K
-
K
S
F
A
H
Y
K
V
S
I
L
K
D
-
E
I
A
H
N
D
L
S
Y
E
R
Y
L
K
E
L
S
H
D
I
S
L
M
K
S
S
I
L
Q
Q
K
A
I
N
D
V
A
P
F
F
N
V
S
P
E
Q
L
A
N
E
I
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
49
Fugue
81.53
38%
-35
- C4 -
-
4EDK
4
DNAG_STAAU
A:
[1-321]
---------------------------------------------------------------------------------------------------------------------
S
N
A
D
D
L
Q
M
I
E
M
H
E
L
I
Q
E
F
Y
Y
Y
A
L
T
K
T
V
E
G
E
Q
A
L
T
Y
L
Q
E
R
G
F
T
D
A
L
I
K
E
R
G
I
G
F
A
P
D
S
S
H
F
C
H
D
F
L
Q
K
K
G
Y
D
I
E
L
A
Y
E
A
G
L
L
S
R
N
E
E
-
N
-
F
-
S
-
Y
Y
D
R
F
R
N
R
I
M
F
P
L
K
N
A
Q
G
R
I
V
G
Y
S
G
R
T
Y
------
T
G
Q
E
P
K
Y
L
N
S
P
E
T
P
I
F
Q
K
R
K
L
L
Y
N
L
D
K
A
R
K
S
I
R
K
L
D
E
I
V
L
L
E
G
F
M
D
V
I
K
S
D
T
A
G
L
K
N
V
V
A
T
M
G
T
Q
L
S
D
E
H
I
T
F
I
R
K
L
T
S
N
I
T
L
M
F
D
G
D
F
A
G
S
E
A
T
-
L
K
T
G
Q
--
H
L
L
---
Q
--
Q
G
-
L
N
V
F
V
--
I
Q
L
P
S
G
M
D
P
D
E
Y
I
G
K
Y
G
N
D
A
F
T
T
F
V
K
N
D
K
-
K
S
F
A
H
Y
K
V
S
I
L
-
K
D
E
I
A
H
N
D
L
S
Y
E
R
Y
L
K
E
L
S
H
D
I
S
L
M
K
S
S
I
L
Q
Q
K
A
I
N
D
V
A
P
F
F
N
V
S
P
E
Q
L
A
N
E
I
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
8
PsiBlast_PDB
81.35
39%
-28
- C4 -
-
4EDV
2
DNAG_STAAU
A:
[7-321]
---------------------------------------------------------------------------------------------------------------------------
Q
M
I
E
M
H
E
L
I
Q
E
F
Y
Y
Y
A
L
T
K
T
V
E
G
E
Q
A
L
T
Y
L
Q
E
R
G
F
T
D
A
L
I
K
E
R
G
I
G
F
A
P
D
S
S
H
F
C
H
D
F
L
Q
K
K
G
Y
D
I
E
L
A
Y
E
A
G
L
L
S
R
-
N
E
-
E
-
N
F
S
-
Y
Y
D
R
F
R
N
R
I
M
F
P
L
K
N
A
Q
G
R
I
V
G
Y
S
G
R
T
Y
T
---
G
Q
E
---
P
K
Y
L
N
S
P
E
T
P
I
F
Q
K
R
K
L
L
Y
N
L
D
K
A
R
K
S
I
R
K
L
D
E
I
V
L
L
E
G
F
M
D
V
I
K
S
D
T
A
G
L
K
N
V
V
A
T
M
G
T
Q
L
S
D
E
H
I
T
F
I
R
K
L
T
S
N
I
T
L
M
F
D
G
D
F
A
G
S
E
A
T
L
K
T
G
Q
H
--
L
L
Q
---
Q
--
G
--
L
N
V
F
V
--
I
Q
L
P
S
G
M
D
P
D
E
Y
I
G
K
Y
G
N
D
A
F
T
T
F
V
K
N
D
K
-
K
S
F
A
H
Y
K
V
S
I
L
K
D
-
E
I
A
H
N
D
L
S
Y
E
R
Y
L
K
E
L
S
H
D
I
S
L
M
K
S
S
I
L
Q
Q
K
A
I
N
D
V
A
P
F
F
N
V
S
P
E
Q
L
A
N
E
I
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
5
PsiBlast_PDB
81.26
39%
-23
- C4 -
-
4EDK
4
DNAG_STAAU
A:
[7-321]
---------------------------------------------------------------------------------------------------------------------------
Q
M
I
E
M
H
E
L
I
Q
E
F
Y
Y
Y
A
L
T
K
T
V
E
G
E
Q
A
L
T
Y
L
Q
E
R
G
F
T
D
A
L
I
K
E
R
G
I
G
F
A
P
D
S
S
H
F
C
H
D
F
L
Q
K
K
G
Y
D
I
E
L
A
Y
E
A
G
L
L
S
R
-
N
E
-
E
-
N
F
S
-
Y
Y
D
R
F
R
N
R
I
M
F
P
L
K
N
A
Q
G
R
I
V
G
Y
S
G
R
T
Y
T
---
G
Q
E
---
P
K
Y
L
N
S
P
E
T
P
I
F
Q
K
R
K
L
L
Y
N
L
D
K
A
R
K
S
I
R
K
L
D
E
I
V
L
L
E
G
F
M
D
V
I
K
S
D
T
A
G
L
K
N
V
V
A
T
M
G
T
Q
L
S
D
E
H
I
T
F
I
R
K
L
T
S
N
I
T
L
M
F
D
G
D
F
A
G
S
E
A
T
L
K
T
G
Q
H
--
L
L
Q
---
Q
--
G
--
L
N
V
F
V
--
I
Q
L
P
S
G
M
D
P
D
E
Y
I
G
K
Y
G
N
D
A
F
T
T
F
V
K
N
D
K
-
K
S
F
A
H
Y
K
V
S
I
L
K
D
-
E
I
A
H
N
D
L
S
Y
E
R
Y
L
K
E
L
S
H
D
I
S
L
M
K
S
S
I
L
Q
Q
K
A
I
N
D
V
A
P
F
F
N
V
S
P
E
Q
L
A
N
E
I
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
6
PsiBlast_PDB
81.25
39%
-25
- C4 -
-
4EDR
4
DNAG_STAAU
A:
[7-321]
---------------------------------------------------------------------------------------------------------------------------
Q
M
I
E
M
H
E
L
I
Q
E
F
Y
Y
Y
A
L
T
K
T
V
E
G
E
Q
A
L
T
Y
L
Q
E
R
G
F
T
D
A
L
I
K
E
R
G
I
G
F
A
P
D
S
S
H
F
C
H
D
F
L
Q
K
K
G
Y
D
I
E
L
A
Y
E
A
G
L
L
S
R
-
N
E
-
E
-
N
F
S
-
Y
Y
D
R
F
R
N
R
I
M
F
P
L
K
N
A
Q
G
R
I
V
G
Y
S
G
R
T
Y
T
---
G
Q
E
---
P
K
Y
L
N
S
P
E
T
P
I
F
Q
K
R
K
L
L
Y
N
L
D
K
A
R
K
S
I
R
K
L
D
E
I
V
L
L
E
G
F
M
D
V
I
K
S
D
T
A
G
L
K
N
V
V
A
T
M
G
T
Q
L
S
D
E
H
I
T
F
I
R
K
L
T
S
N
I
T
L
M
F
D
G
D
F
A
G
S
E
A
T
L
K
T
G
Q
H
--
L
L
Q
---
Q
--
G
--
L
N
V
F
V
--
I
Q
L
P
S
G
M
D
P
D
E
Y
I
G
K
Y
G
N
D
A
F
T
T
F
V
K
N
D
K
-
K
S
F
A
H
Y
K
V
S
I
L
K
D
-
E
I
A
H
N
D
L
S
Y
E
R
Y
L
K
E
L
S
H
D
I
S
L
M
K
S
S
I
L
Q
Q
K
A
I
N
D
V
A
P
F
F
N
V
S
P
E
Q
L
A
N
E
I
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
4
PsiBlast_PDB
81.14
39%
-26
- C4 -
-
4EDG
3
DNAG_STAAU
A:
[7-321]
---------------------------------------------------------------------------------------------------------------------------
Q
M
I
E
M
H
E
L
I
Q
E
F
Y
Y
Y
A
L
T
K
T
V
E
G
E
Q
A
L
T
Y
L
Q
E
R
G
F
T
D
A
L
I
K
E
R
G
I
G
F
A
P
D
S
S
H
F
C
H
D
F
L
Q
K
K
G
Y
D
I
E
L
A
Y
E
A
G
L
L
S
R
-
N
E
-
E
-
N
F
S
-
Y
Y
D
R
F
R
N
R
I
M
F
P
L
K
N
A
Q
G
R
I
V
G
Y
S
G
R
T
Y
T
---
G
Q
E
---
P
K
Y
L
N
S
P
E
T
P
I
F
Q
K
R
K
L
L
Y
N
L
D
K
A
R
K
S
I
R
K
L
D
E
I
V
L
L
E
G
F
M
D
V
I
K
S
D
T
A
G
L
K
N
V
V
A
T
M
G
T
Q
L
S
D
E
H
I
T
F
I
R
K
L
T
S
N
I
T
L
M
F
D
G
D
F
A
G
S
E
A
T
L
K
T
G
Q
H
--
L
L
Q
---
Q
--
G
--
L
N
V
F
V
--
I
Q
L
P
S
G
M
D
P
D
E
Y
I
G
K
Y
G
N
D
A
F
T
T
F
V
K
N
D
K
-
K
S
F
A
H
Y
K
V
S
I
L
K
D
-
E
I
A
H
N
D
L
S
Y
E
R
Y
L
K
E
L
S
H
D
I
S
L
M
K
S
S
I
L
Q
Q
K
A
I
N
D
V
A
P
F
F
N
V
S
P
E
Q
L
A
N
E
I
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
3
PsiBlast_PDB
81.02
39%
-32
- C4 -
-
4E2K
2
DNAG_STAAU
A:
[7-321]
---------------------------------------------------------------------------------------------------------------------------
Q
M
I
E
M
H
E
L
I
Q
E
F
Y
Y
Y
A
L
T
K
T
V
E
G
E
Q
A
L
T
Y
L
Q
E
R
G
F
T
D
A
L
I
K
E
R
G
I
G
F
A
P
D
S
S
H
F
C
H
D
F
L
Q
K
K
G
Y
D
I
E
L
A
Y
E
A
G
L
L
S
R
-
N
E
-
E
-
N
F
S
-
Y
Y
D
R
F
R
N
R
I
M
F
P
L
K
N
A
Q
G
R
I
V
G
Y
S
G
R
T
Y
T
---
G
Q
E
---
P
K
Y
L
N
S
P
E
T
P
I
F
Q
K
R
K
L
L
Y
N
L
D
K
A
R
K
S
I
R
K
L
D
E
I
V
L
L
E
G
F
M
D
V
I
K
S
D
T
A
G
L
K
N
V
V
A
T
M
G
T
Q
L
S
D
E
H
I
T
F
I
R
K
L
T
S
N
I
T
L
M
F
D
G
D
F
A
G
S
E
A
T
L
K
T
G
Q
H
--
L
L
Q
---
Q
--
G
--
L
N
V
F
V
--
I
Q
L
P
--
M
D
P
D
E
Y
I
G
K
Y
G
N
D
A
F
T
T
F
V
K
N
D
K
-
K
S
F
A
H
Y
K
V
S
I
L
K
D
-
E
I
A
H
N
D
L
S
Y
E
R
Y
L
K
E
L
S
H
D
I
S
L
M
K
S
S
I
L
Q
Q
K
A
I
N
D
V
A
P
F
F
N
V
S
P
E
Q
L
A
N
E
I
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
9
PsiBlast_PDB
80.78
39%
-26
- C4 -
-
4EE1
2
DNAG_STAAU
A:
[7-321]
---------------------------------------------------------------------------------------------------------------------------
Q
M
I
E
M
H
E
L
I
Q
E
F
Y
Y
Y
A
L
T
K
T
V
E
G
E
Q
A
L
T
Y
L
Q
E
R
G
F
T
D
A
L
I
K
E
R
G
I
G
F
A
P
D
S
S
H
F
C
H
D
F
L
Q
K
K
G
Y
D
I
E
L
A
Y
E
A
G
L
L
S
R
-
N
E
-
E
-
N
F
S
-
Y
Y
D
R
F
R
N
R
I
M
F
P
L
K
N
A
Q
G
R
I
V
G
Y
S
G
R
T
Y
T
---
G
Q
E
---
P
K
Y
L
N
S
P
E
T
P
I
F
Q
K
R
K
L
L
Y
N
L
D
K
A
R
K
S
I
R
K
L
D
E
I
V
L
L
E
G
F
M
D
V
I
K
S
D
T
A
G
L
K
N
V
V
A
T
M
G
T
Q
L
S
D
E
H
I
T
F
I
R
K
L
T
S
N
I
T
L
M
F
D
G
D
F
A
G
S
E
A
T
L
K
T
G
Q
H
--
L
L
Q
---
Q
--
G
--
L
N
V
F
V
--
I
Q
L
P
S
G
M
D
P
D
E
Y
I
G
K
Y
G
N
D
A
F
T
T
F
V
K
N
D
K
-
K
S
F
A
H
Y
K
V
S
I
L
K
D
-
E
I
A
H
N
D
L
S
Y
E
R
Y
L
K
E
L
S
H
D
I
S
L
M
K
S
S
I
L
Q
Q
K
A
I
N
D
V
A
P
F
F
N
V
S
P
E
Q
L
A
N
E
I
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
28
HHSearch
80.74
39%
-31
- C4 -
-
4EDK
4
DNAG_STAAU
A:
[5-321]
-------------------------------------------------------------------------------------------------------------------------
D
L
Q
M
I
E
M
H
E
L
I
Q
E
F
Y
Y
Y
A
L
T
K
T
V
E
G
E
Q
A
L
T
Y
L
Q
E
R
G
F
T
D
A
L
I
K
E
R
G
I
G
F
A
P
D
S
S
H
F
C
H
D
F
L
Q
K
K
G
Y
D
I
E
L
A
Y
E
A
G
L
L
S
R
-
N
E
E
N
-
F
-
S
-
Y
Y
D
R
F
R
N
R
I
M
F
P
L
K
N
A
Q
G
R
I
V
G
Y
S
G
R
T
Y
T
G
------
Q
E
P
K
Y
L
N
S
P
E
T
P
I
F
Q
K
R
K
L
L
Y
N
L
D
K
A
R
K
S
I
R
K
L
D
E
I
V
L
L
E
G
F
M
D
V
I
K
S
D
T
A
G
L
K
N
V
V
A
T
M
G
T
Q
L
S
D
E
H
I
T
F
I
R
K
L
T
S
N
I
T
L
M
F
D
G
D
F
A
G
S
E
A
T
-
L
K
T
G
Q
--
H
L
L
---
Q
---
Q
G
L
N
V
F
V
--
I
Q
L
P
S
G
M
D
P
D
E
Y
I
G
K
Y
G
N
D
A
F
T
T
F
V
K
-
N
D
K
K
S
F
A
H
Y
K
V
S
I
L
K
D
E
I
A
H
-
N
D
L
S
Y
E
R
Y
L
K
E
L
S
H
D
I
S
L
M
K
S
S
I
L
Q
Q
K
A
I
N
D
V
A
P
F
F
N
V
S
P
E
Q
L
A
N
E
I
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2
PsiBlast_PDB
77.99
33%
-9
- C4 -
-
2AU3
-
DNAG_AQUAE
A:
[7-345]
---------
I
D
E
L
R
R
E
I
D
I
V
D
V
I
S
E
Y
L
N
L
E
K
V
G
S
N
Y
R
T
N
C
P
F
H
P
D
D
T
P
S
F
Y
V
S
P
S
K
Q
I
F
K
C
F
G
C
G
V
G
G
D
A
I
K
F
V
S
L
Y
E
D
I
S
Y
F
E
A
A
L
E
L
A
K
R
Y
G
K
K
L
D
L
E
K
I
-----------------
S
K
D
E
K
V
Y
V
A
L
D
R
V
C
D
F
Y
R
E
S
L
L
K
N
R
E
---
A
S
E
Y
V
K
S
R
G
I
D
P
K
V
A
R
K
F
D
L
G
Y
A
P
S
S
E
A
-
L
V
K
V
L
K
E
N
D
L
L
E
A
Y
L
E
T
K
N
L
-
L
S
-
P
T
-
K
-
G
-
V
-
Y
R
D
L
F
L
R
R
V
V
I
P
I
K
D
P
R
G
R
V
I
G
F
G
G
R
R
I
V
E
D
K
-----
S
P
K
Y
I
N
S
P
D
S
R
V
F
K
K
G
E
N
L
F
G
L
Y
E
A
K
E
Y
I
K
E
E
G
F
A
I
L
V
E
G
Y
F
D
L
L
R
L
F
S
E
G
I
R
N
V
V
A
P
L
G
T
A
L
T
Q
N
Q
A
N
L
L
S
K
F
T
K
K
V
Y
I
L
Y
D
G
D
D
A
G
R
K
A
M
-
K
S
A
I
P
--
L
L
----
L
--
S
A
G
V
E
V
Y
P
--
V
Y
L
P
E
G
Y
D
P
D
E
F
I
K
E
F
G
K
E
E
L
R
R
L
I
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
24
HHSearch
76.42
31%
-52
- C4 -
-
5VAZ
-
DNAG_PSEAE
B:
[19-339]
---------------------------------------------------------------------------------------------------------------------------
P
L
Y
P
L
L
S
A
A
A
E
F
Y
K
Q
A
L
K
S
H
P
A
R
K
A
A
V
N
Y
L
K
G
R
G
L
T
G
E
I
A
R
D
F
G
L
G
F
A
P
P
G
W
D
N
L
L
K
H
L
G
G
D
N
L
Q
L
K
A
M
L
D
A
G
L
L
V
E
-
N
S
D
T
-
G
-
K
-
R
Y
D
R
F
R
D
R
V
M
F
P
I
R
D
S
R
G
R
I
I
A
F
G
G
R
V
L
G
D
------
D
K
P
K
Y
L
N
S
P
E
T
P
V
F
H
K
G
Q
E
L
Y
G
L
Y
E
A
R
Q
K
N
R
D
L
D
E
I
M
V
V
E
G
Y
M
D
V
I
A
L
A
Q
Q
G
I
R
N
A
V
A
T
L
G
T
A
T
S
E
E
H
I
K
R
L
F
R
L
V
P
S
I
L
F
C
F
D
G
D
Q
A
G
R
K
A
A
-
W
R
A
L
E
--
S
V
L
PNL
Q
---
D
G
K
R
V
R
F
--
L
F
L
P
E
G
E
D
P
D
S
L
V
R
A
E
G
E
D
A
F
R
A
R
I
T
Q
Q
A
-
Q
P
L
A
E
Y
F
F
Q
Q
L
M
L
E
A
D
P
A
T
L
E
G
K
A
H
L
A
T
L
A
A
P
L
L
E
K
I
P
G
N
N
L
R
L
L
M
R
Q
R
L
S
E
I
T
G
L
S
G
E
N
I
G
Q
L
A
H
H
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------
27
HHSearch
73.80
33%
-88
- C4 -
-
1DD9
-
DNAG_ECOLI
A:
[20-333]
---------------------------------------------------------------------------------------------------------------------------
T
L
Y
Q
L
M
D
G
L
N
T
F
Y
Q
Q
S
L
Q
Q
-
P
V
A
T
S
A
R
Q
Y
L
E
K
R
G
L
S
H
E
V
I
A
R
F
A
I
G
F
A
P
P
G
W
D
N
V
L
K
R
F
G
G
N
P
E
N
R
Q
S
L
I
D
A
G
M
L
V
T
-
N
------
R
-
S
Y
D
R
F
R
E
R
V
M
F
P
I
R
D
K
R
G
R
V
I
G
F
G
G
R
V
L
G
N
------
D
T
P
K
Y
L
N
S
P
E
T
D
I
F
H
K
G
R
Q
L
Y
G
L
Y
E
A
Q
Q
D
N
A
E
P
N
R
L
L
V
V
E
G
Y
M
D
V
V
A
L
A
Q
Y
G
I
N
Y
A
V
A
S
L
G
-
S
T
T
A
D
H
I
Q
L
L
F
R
A
T
N
N
V
I
C
C
Y
D
G
D
R
A
G
R
D
A
A
-
W
R
A
L
E
--
T
A
L
PYM
T
---
D
G
R
Q
L
R
F
--
M
F
L
P
D
G
E
D
P
D
T
L
V
R
K
E
G
K
E
A
F
E
A
R
M
E
-
Q
A
-
M
P
L
S
A
F
L
F
N
S
L
M
P
Q
V
D
L
S
T
P
D
G
R
A
R
L
S
T
L
A
L
P
L
I
S
Q
V
P
G
E
T
L
R
I
Y
L
R
Q
E
L
G
N
K
L
G
I
L
D
D
S
Q
L
E
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
26
HHSearch
73.76
33%
-78
- C4 -
-
3B39
2
DNAG_ECOLI
A:
[5-320]
------------------------------------------------------------------------------------------------------------------------
Q
R
Q
T
L
Y
Q
L
M
D
G
L
N
T
F
Y
Q
Q
S
L
Q
Q
-
P
V
A
T
S
A
R
Q
Y
L
E
K
R
G
L
S
H
E
V
I
A
R
F
A
I
G
F
A
P
P
G
W
D
N
V
L
K
R
F
G
G
N
P
E
N
R
Q
S
L
I
D
A
G
M
L
V
T
-
N
D
-----
R
-
S
Y
D
R
F
R
E
R
V
M
F
P
I
R
D
K
R
G
R
V
I
G
F
G
G
R
V
L
G
N
------
D
T
P
K
Y
L
N
S
P
E
T
D
I
F
H
K
G
R
Q
L
Y
G
L
Y
E
A
Q
Q
D
N
A
E
P
N
R
L
L
V
V
E
G
Y
M
D
V
V
A
L
A
Q
Y
G
I
N
Y
A
V
A
S
L
G
T
S
T
T
A
D
H
I
Q
L
L
F
R
A
T
N
N
V
I
C
C
Y
D
G
D
R
A
G
R
D
A
A
-
W
C
A
L
E
--
T
A
L
---
P
YM
T
D
G
R
Q
L
R
F
--
M
F
L
P
D
G
E
D
P
D
T
L
V
R
K
E
G
K
E
A
F
E
A
R
M
E
-
Q
A
-
M
P
L
S
A
F
L
F
N
S
L
M
P
Q
V
D
L
S
T
P
D
G
R
A
R
L
S
T
L
A
L
P
L
I
S
Q
V
P
G
E
T
L
R
I
Y
L
R
Q
E
L
G
N
K
L
G
I
L
D
D
S
Q
L
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
50
Fugue
73.67
32%
-71
- C4 -
-
1DD9
-
DNAG_ECOLI
A:
[20-333]
---------------------------------------------------------------------------------------------------------------------------
T
L
Y
Q
L
M
D
G
L
N
T
F
Y
Q
Q
S
L
-
Q
Q
P
V
A
T
S
A
R
Q
Y
L
E
K
R
G
L
S
H
E
V
I
A
R
F
A
I
G
F
A
P
P
G
W
D
N
V
L
K
R
F
G
G
N
P
E
N
R
Q
S
L
I
D
A
G
M
L
V
T
------
N
-
R
-
S
Y
D
R
F
R
E
R
V
M
F
P
I
R
D
K
R
G
R
V
I
G
F
G
G
R
V
L
------
G
N
D
T
P
K
Y
L
N
S
P
E
T
D
I
F
H
K
G
R
Q
L
Y
G
L
Y
E
A
Q
Q
D
N
A
E
P
N
R
L
L
V
V
E
G
Y
M
D
V
V
A
L
A
Q
Y
G
I
N
Y
A
V
A
S
L
G
S
T
-
T
A
D
H
I
Q
L
L
F
R
A
T
N
N
V
I
C
C
Y
D
G
D
R
A
G
R
D
A
A
-
W
R
A
L
E
--
T
A
L
---
P
YM
T
D
G
R
Q
L
R
F
--
M
F
L
P
D
G
E
D
P
D
T
L
V
R
K
E
G
K
E
A
F
E
A
R
M
E
Q
A
--
M
P
L
S
A
F
L
F
N
S
L
M
P
Q
V
D
L
S
T
P
D
G
R
A
R
L
S
T
L
A
L
P
L
I
S
Q
V
P
G
E
T
L
R
I
Y
L
R
Q
E
L
G
N
K
L
G
I
L
D
D
S
Q
L
E
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
12
PsiBlast_PDB
68.18
39%
-64
- C4 -
-
5VAZ
-
DNAG_PSEAE
A:
[27-265]
-----------------------------------------------------------------------------------------------------------------------------------
A
A
E
F
Y
K
Q
A
L
K
S
H
P
A
R
K
A
A
V
N
Y
L
K
G
R
G
L
T
G
E
I
A
R
D
F
G
L
G
F
A
P
P
G
W
D
N
L
L
K
H
L
G
G
D
N
L
Q
L
K
A
M
L
D
A
G
L
L
V
E
-
N
S
-
D
T
G
-
K
-
R
Y
D
R
F
R
D
R
V
M
F
P
I
R
D
S
R
G
R
I
I
A
F
G
G
R
V
L
G
------
D
D
K
P
K
Y
L
N
S
P
E
T
P
V
F
H
K
G
Q
E
L
Y
G
L
Y
E
A
R
Q
K
N
R
D
L
D
E
I
M
V
V
E
G
Y
M
D
V
I
A
L
A
Q
Q
G
I
R
N
A
V
A
T
L
G
T
A
T
S
E
E
H
I
K
R
L
F
R
L
V
P
S
I
L
F
C
F
D
G
D
Q
A
G
R
K
A
A
-
W
R
A
L
E
--
S
V
L
---
P
--
N
L
Q
D
G
K
R
V
R
F
L
F
L
P
E
G
E
D
P
D
S
L
V
R
A
E
G
E
D
A
F
R
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
22
PsiBlast_CBE
67.21
39%
-92
- C4 -
-
3B39
1
DNAG_ECOLI
B:
[19-252]
---------------------------------------------------------------------------------------------------------------------------------------
F
Y
Q
Q
S
L
Q
Q
P
V
A
T
S
A
R
Q
Y
L
E
K
R
G
L
S
H
E
V
I
A
R
F
A
I
G
F
A
P
P
G
W
D
N
V
L
K
R
F
G
G
N
P
E
N
R
Q
S
L
I
D
A
G
M
L
V
T
-
N
D
-
Q
-
G
-
R
-
S
Y
D
R
F
R
E
R
V
M
F
P
I
R
D
K
R
G
R
V
I
G
F
G
G
R
V
L
G
------
N
D
T
P
K
Y
L
N
S
P
E
T
D
I
F
H
K
G
R
Q
L
Y
G
L
Y
E
A
Q
Q
D
N
A
E
P
N
R
L
L
V
V
E
G
Y
M
D
V
V
A
L
A
Q
Y
G
I
N
Y
A
V
A
S
L
G
T
S
T
T
A
D
H
I
Q
L
L
F
R
A
T
N
N
V
I
C
C
Y
D
G
D
R
A
G
R
D
A
A
-
W
C
A
L
E
T
A
L
P
Y
---
M
--
T
D
G
R
Q
L
R
F
--
M
F
L
P
D
G
E
D
P
D
T
L
V
R
K
E
G
K
E
A
F
E
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
14
PsiBlast_PDB
65.70
39%
-95
- C4 -
-
1EQN
-
DNAG_ECOLI
A:
[126-359]
---------------------------------------------------------------------------------------------------------------------------------------
F
Y
Q
Q
S
L
Q
Q
P
V
A
T
S
A
R
Q
Y
L
E
K
R
G
L
S
H
E
V
I
A
R
F
A
I
G
F
A
P
P
G
W
D
N
V
L
K
R
F
G
G
N
P
E
N
R
Q
S
L
I
D
A
G
M
L
V
T
-
N
D
-
Q
-
G
-
R
-
S
Y
D
R
F
R
E
R
V
M
F
P
I
R
D
K
R
G
R
V
I
G
F
G
G
R
V
L
G
------
N
D
T
P
K
Y
L
N
S
P
E
T
D
I
F
H
K
G
R
Q
L
Y
G
L
Y
E
A
Q
Q
D
N
A
E
P
N
R
L
L
V
V
E
G
Y
M
D
V
V
A
L
A
Q
Y
G
I
N
Y
A
V
A
S
L
G
T
S
T
T
A
D
H
I
Q
L
L
F
R
A
T
N
N
V
I
C
C
Y
D
G
D
R
A
G
R
D
A
A
-
W
R
A
L
E
T
A
L
P
Y
---
M
--
T
D
G
R
Q
L
R
F
--
M
F
L
P
D
G
E
D
P
D
T
L
V
R
K
E
G
K
E
A
F
E
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
13
PsiBlast_PDB
64.96
39%
-97
- C4 -
-
3B39
1
DNAG_ECOLI
A:
[19-252]
---------------------------------------------------------------------------------------------------------------------------------------
F
Y
Q
Q
S
L
Q
Q
P
V
A
T
S
A
R
Q
Y
L
E
K
R
G
L
S
H
E
V
I
A
R
F
A
I
G
F
A
P
P
G
W
D
N
V
L
K
R
F
G
G
N
P
E
N
R
Q
S
L
I
D
A
G
M
L
V
T
-
N
D
-----
R
-
S
Y
D
R
F
R
E
R
V
M
F
P
I
R
D
K
R
G
R
V
I
G
F
G
G
R
V
L
G
------
N
D
T
P
K
Y
L
N
S
P
E
T
D
I
F
H
K
G
R
Q
L
Y
G
L
Y
E
A
Q
Q
D
N
A
E
P
N
R
L
L
V
V
E
G
Y
M
D
V
V
A
L
A
Q
Y
G
I
N
Y
A
V
A
S
L
G
T
S
T
T
A
D
H
I
Q
L
L
F
R
A
T
N
N
V
I
C
C
Y
D
G
D
R
A
G
R
D
A
A
-
W
C
A
L
E
T
A
L
P
Y
---
M
--
T
D
G
R
Q
L
R
F
--
M
F
L
P
D
G
E
D
P
D
T
L
V
R
K
E
G
K
E
A
F
E
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------