@TOME V2.3
(Mar 2018)
Ref.
-
-
Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
Show Ligands of Templates
Complexes Affinity Score
Main Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Complexes Tab
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : Q3XZP6: (2018-01-16 )
MRYSTILISTFAALSLSLTINQTVHTEEIETAKWTETKWANVNRITFQDEFSSFNSGVAKLRKGQTATIKAKIDYSGDLAPILQSAVTFENVDPALSIGYDENTLTIQHKQAIFTFTVTLNQDLLKPALFTVKVSDGLPNDHHHLTPYSQRQTIEQDSAIDSGGDLVEEPTDKPENENKPEVPPTENPDGEQKPEIEPGEEPDTETQPEPDNESKPEITPGEKPDVDPEEKPDVTPEPDTDSGNQTVPETNPDTDNETENPEKPEVAPEEKPDVTPEPDTDSGNQTVPETNPDTDNETENPEKPEVDPEEKPDVTPEPDTDARDQGIPEKINKKTIQEDGKKESKKSNLAILKINEEQLNKKSRIFDSAQSAETLKSSKDTTFASPETKNKQLPKSGESQNKVILWSGIILLSIATMLSAKRFKQNRSL
Atome Classification :
(20 SA)
--.........10.---.......20........30........----40........50........60.-.......70........80....------------....90........--100.......110......-.120.......130.......140.......----150.......160.......170...--------------------.....180--........190.------......200.......210.......220-----.-.----......230.........240-....---.....250....-...260-..--......270...----------...--------.280...-----------------....290........------300.......310..-----.....320.......330.......340.......350.......360.......370------........380.......390--.........400.......410.......420.......-----------------------
(Atome)
(Ident)
(Tito)
(Num)
(QMean)
(Ligand)
(Uniprot)
--M
R
Y
S
T
I
L
I
S
T
F
A
---
A
L
S
L
S
L
T
IN
Q
T
V
H
T
E
EIETAKWTETKW----AN
V
N
R
I
T
F
Q
D
E
F
S
S
F
N
S
G
V
A
K
LR-KG
Q
T
A
T
I
K
A
K
I
DYSG
D
L
A
P
I
L
Q
S
------------
A
V
TFENVDP
A
L
S
IG--YDE
N
T
L
T
I
Q
HK
Q
A
I
F
T
F
T
V
-
T
LN
Q
D
LLKP
A
L
F
T
V
K
VSDGLPNDHHHLTP
Y
S
----
Q
RQTIEQDSAIDSGGDLVEEP-TDKP--------------------ENENKPE---VPPTENPDGEQK------PEIEPGEEPDTETQPEPDNESKPEITPG------E-K----PDVDPEE--KPDVTPEPDT---DSGN---QTVPETNPDTDN-ETENP--EK--PEVAPEEKPDVT----------PEP--------DTDSGNQ-----------------TVPET-NPDTDNETE------NPEKPEVDPEEKPDV-----TPEPDTDARDQGI
P
E
K
I
N
K
K
T
I
Q
EDGKKESKKS
N
L
A
I
L
K
I
N
E
E
QL
N
K
K
S
R
IFD
S
A
Q
S
-------
A
E
T
L
KSSKDTTFASPETKN----KQLPKSGESQ
N
K
V
I
L
WS
G
I
I
L
L
S
I
A
T
M
L
S
A
K
R
F
KQNRSL-----------------------
14
Fugue
61.58
19%
30
- C15 -
-
4Q4D
2
VIP2_HUMAN
A:
[7-323]
------
Q
I
V
V
G
I
C
S
---
M
A
K
K
S
K
S
K
P
M
K
E
I
L
E
R
I
S
L
F
K
Y
-----------
I
T
V
V
V
F
-
E
E
E
V
I
L
N
E
P
V
E
N
W
P
-
L
-----
C
D
C
L
I
S
F
H
S
K
G
F
P
-
L
D
K
------------
A
V
A
Y
A
K
L
R
N
P
F
V
I
N
--
D
L
N
M
Q
Y
L
I
Q
D
R
R
E
V
Y
S
I
L
Q
-
A
--
E
G
I
L
L
P
R
Y
A
I
L
N
R
D
P
N
N
P
K
E
C
N
-------------
L
I
E
G
E
D
H
V
E
V
N
G
E
V
F
Q
K
P
F
V
E
K
P
--------------------
V
S
A
E
D
H
N
V
Y
I
Y
Y
P
T
S
A
G
G
G
S
Q
R
------
L
F
R
K
I
G
S
R
S
S
V
Y
S
------------------------------------------
P
E
S
N
V
---
R
K
T
G
---
S
Y
I
Y
E
E
F
M
P
T
D
G
--------------------
T
D
V
K
----------
V
Y
T
--------
V
G
P
D
Y
A
H
-----------------
A
E
A
R
K
-
S
P
A
L
D
G
K
V
E
------
R
------
D
S
E
G
K
E
V
R
-----
Y
P
-
V
I
L
N
A
R
E
K
L
I
A
W
K
V
C
L
A
F
K
Q
T
------------
V
C
G
F
D
L
L
R
A
N
G
Q
S
Y
V
C
D
V
N
-----------------
G
F
S
F
V
-----------------
K
N
S
M
K
Y
Y
D
D
C
A
K
I
L
G
N
I
V
M
R
E
L
A
P
Q
F
H
I
P
W
S
------------------------
19
Fugue
58.78
17%
104
* C16 *
-
5FB4
2
DIT9_BPPH2
A:
[2-599]
AY
V
P
L
S
G
T
N
V
R
I
L
A
---
D
V
P
F
S
N
D
Y
K
N
T
R
W
F
----
T
S
S
S
N
Q
Y
N
W
----
F
N
S
K
S
R
V
Y
E
M
S
K
V
T
F
-
M
G
F
R
E
N
K
-
P
Y
V
S
V
S
L
P
I
D
K
L
Y
S
A
-------
S
------------
Y
I
M
F
Q
N
-
A
D
Y
G
N
K
W
--
F
Y
A
F
V
T
E
L
E
F
K
N
S
A
V
T
Y
-
V
-
H
F
E
I
D
V
L
Q
T
W
M
F
D
I
K
F
Q
E
S
F
I
V
R
E
H
V
K
L
W
N
D
DGTP
T
I
N
T
I
D
E
G
L
S
Y
G
S
E
Y
D
I
V
S
V
E
-
N
H
K
P
YDD
M
M
F
L
V
I
I
S
KSIMHGTPG
E
E
E
S
R
L
N
---
D
I
N
A
S
L
N
G
M
P
Q
P
L
C
Y
Y
I
H
P
F
Y
K
D
G
K
V
P
K
T
Y
I
G
D
N
N
A
N
L
S
-
P
I
V
N
M
L
------
T
-
N
----
I
F
S
Q
K
S
A
--
V
N
D
I
V
N
M
Y
V
T
---
D
Y
I
G
---
L
K
L
D
Y
K
N
G
D
K
E
L
-
K
L
D
K
D
M
F
E
Q
--
A
G
I
A
D
D
K
H
G
N
V
D
T
I
F
V
KKIP
D
Y
E
A
L
--------
E
I
D
T
G
D
K
WGGFTKDQESKLMMYPY
C
V
T
E
I
-
T
D
F
K
G
N
H
M
N
L
KTEYI
N
N
S
K
L
K
I
Q
V
R
G
S
L
G
V
-----
S
N
K
V
A
Y
S
V
Q
D
Y
N
A
D
S
A
L
S
----
G
G
N
R
L
T
A
S
L
D
S
S
L
I
N
N
N
P
N
D
I
A
I
L
N
G
N
T
A
F
D
Y
G
N
G
YR
G
V
Y
V
I
K
K
Q
L
K
A
E
Y
R
R
S
L
S
S
F
F
H
K
Y
GYKI
N
R
V
K
K
P
N
L
R
T
R
K
A
F
N
Y
V
Q
T
K
D
C
F
I
S
G
D
I
N
N
N
D
L
Q
E
I
R
T
I
F
D
N
G
I
T
L
W
HTDNIGNYSVENELR
26
HHSearch
38.45
17%
-366
- C4 -
-
5LV6
-
B:
[35-40]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
R
R
R
H
I
---------------------------
6
PsiBlast_PDB
35.66
31%
238
- C17 -
-
1V0S
-
?
A:
[248-330]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
P
T
M
H
K
D
T
N
P
K
A
S
P
A
T
G
N
V
P
V
I
A
V
G
------
G
-
L
GVGI
K
D
V
D
P
K
S
T
F
R
P
D
L
P
T
A
S
D
T
---
K
C
V
V
---
G
L
H
D
N
T
N
A
D
R
D
Y
-
D
T
V
N
P
--
E
E
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
5
PsiBlast_PDB
35.36
31%
222
- C17 -
-
1V0R
-
?
A:
[245-321]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
P
T
M
H
K
D
T
N
P
K
A
S
P
A
T
G
N
V
P
V
I
A
V
G
------
G
-
L
GVGI
K
D
V
D
P
K
S
TF
R
P
D
L
P
T
A
S
D
T
---
K
C
V
V
---
G
L
H
D
N
T
N
A
D
R
D
Y
-
D
T
V
N
P
--
E
E
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
8
PsiBlast_PDB
35.24
31%
218
- C17 -
-
1V0U
-
?
A:
[245-322]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
P
T
M
H
K
D
T
N
P
K
A
S
P
A
T
G
N
V
P
V
I
A
V
G
------
G
-
L
GVGI
K
D
V
D
P
K
S
TF
R
P
D
L
P
T
A
S
D
T
---
K
C
V
V
---
G
L
H
D
N
T
N
A
D
R
D
Y
-
D
T
V
N
P
--
E
E
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
4
PsiBlast_PDB
34.74
31%
244
- C17 -
-
1F0I
-
?
A:
[243-320]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
P
T
M
H
K
D
T
N
P
K
A
S
P
A
T
G
N
V
P
V
I
A
V
G
------
G
-
L
GVGI
K
D
V
D
P
K
S
T
F
R
P
D
L
P
T
A
S
D
T
---
K
C
V
V
---
G
L
H
D
N
T
N
A
D
R
D
Y
-
D
T
V
N
P
--
E
E
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
10
PsiBlast_PDB
34.38
31%
230
- C17 -
-
1V0W
-
?
A:
[245-322]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
P
T
M
H
K
D
T
N
P
K
A
S
P
A
T
G
N
V
P
V
I
A
V
G
------
G
-
L
GVGI
K
D
V
D
P
K
S
TF
R
P
D
L
P
T
A
S
D
T
---
K
C
V
V
---
G
L
H
D
N
T
N
A
D
R
D
Y
-
D
T
V
N
P
--
E
E
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
11
PsiBlast_PDB
34.16
31%
226
- C17 -
-
1V0Y
-
?
A:
[245-322]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
P
T
M
H
K
D
T
N
P
K
A
S
P
A
T
G
N
V
P
V
I
A
V
G
------
G
-
L
GVGI
K
D
V
D
P
K
S
TF
R
P
D
L
P
T
A
S
D
T
---
K
C
V
V
---
G
L
H
D
N
T
N
A
D
R
D
Y
-
D
T
V
N
P
--
E
E
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
9
PsiBlast_PDB
34.11
31%
229
- C17 -
-
1V0V
-
?
A:
[245-322]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
P
T
M
H
K
D
T
N
P
K
A
S
P
A
T
G
N
V
P
V
I
A
V
G
------
G
-
L
GVGI
K
D
V
D
P
K
S
TF
R
P
D
L
P
T
A
S
D
T
---
K
C
V
V
---
G
L
H
D
N
T
N
A
D
R
D
Y
-
D
T
V
N
P
--
E
E
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
7
PsiBlast_PDB
33.92
31%
241
- C17 -
-
1V0T
-
?
A:
[245-322]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
P
T
M
H
K
D
T
N
P
K
A
S
P
A
T
G
N
V
P
V
I
A
V
G
------
G
-
L
GVGI
K
D
V
D
P
K
S
TF
R
P
D
L
P
T
A
S
D
T
---
K
C
V
V
---
G
L
H
D
N
T
N
A
D
R
D
Y
-
D
T
V
N
P
--
E
E
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
32
HHSearch
32.96
8%
-205
* C17 *
-
1V10
-
?
A:
[56-75]
------------------------------------------------------------------
L
I
T
G
N
-
I
D
D
R
F
Q
I
N
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
12
PsiBlast_PDB
32.39
28%
116
- C11 -
-
2NBI
-
?
A:
[311-396]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
D
S
A
R
P
------
P
D
C
T
A
V
G
R
P
D
C
N
V
L
P
F
P
N
N
I
G
C
P
S
C
C
P
F
------
E
C
S
----
P
D
-------
N
P
M
F
T
P
S
P
D
G
---
S
P
P
N
CSP
T
M
L
P
S
P
S
P
S
A
V
T
-
V
P
L
T
P
---
A
--
P
S
S
A
P
T
R
Q
P
S
S
Q
----------
P
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
3
PsiBlast_PDB
31.92
26%
165
- C15 -
-
1VG9
-
RAE1_RAT
A:
[527-614]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
P
Y
T
E
I
E
A
E
N
E
Q
V
E
K
P
R
L
L
W
A
L
Y
F
N
M
R
D
-
S
----
S
D
I
S
R
D
C
--
Y
N
D
L
P
S
N
V
Y
V
---
C
S
G
-------
P
D
S
G
L
G
N
D
N
-
A
V
K
Q
A
--
E
T
L
F
Q
Q
I
C
P
N
E
--
D
F
C
----------
P
A
P
PNPEDIVL
D
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
1
PsiBlast_PDB
31.68
27%
7
- C15 -
-
4A1H
2
MYP2_HUMAN
A:
[10-95]
-------------------------------------------
W
----
K
L
V
S
S
E
N
F
D
D
Y
M
K
A
L
G
V
G
L
A
T
R
K
-
L
G
N
L
A
K
P
T
V
I
I
S
K
S
G
D
I
I
T
I
-
R
T
------------
E
S
T
F
K
N
T
E
I
S
F
K
L
G
Q
E
F
E
E
T
T
A
D
N
R
K
T
K
S
I
V
T
L
Q
R
G
S
L
N
Q
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2
PsiBlast_PDB
30.47
28%
266
- C13 -
-
1JHN
-
CALX_CANLF
A:
[226-321]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
P
V
N
P
S
R
E
I
E
D
P
E
------
D
-
Q
----
K
P
E
D
W
D
E
--
R
P
K
I
-
P
D
P
D
A
VKP
D
D
W
N
---
E
D
A
P
A
K
I
P
D
------
E
E
A
--
T
K
--
P
D
G
W
L
D
D
E
P
E
Y
V
----------
P
D
P
--------
D
A
E
K
----------------------
P
E
D
W
D
E
D
M
D
G
E
W
E
------
A
P
Q
I
A
N
P
K
C
E
S
A
P
------------------------------------------------------------------------------------------------------------------------------------------------------------
13
Fugue
29.04
18%
227
- C15 -
-
4TSH
-
?
A:
[1-121]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
V
G
T
Q
T
G
N
P
A
T
N
L
P
--
E
A
--
Q
G
S
A
S
K
E
A
E
Q
S
Q
----------
N
Q
A
--------
G
E
T
N
G
S
I
-----------------
P
V
E
V
P
-
K
T
D
L
D
Q
A
A
K
------
D
A
K
S
A
G
V
N
V
V
Q
D
A
D
V
NKGTV
K
T
A
E
E
A
V
Q
K
E
T
E
I
K
E
D
Y
T
K
Q
A
E
D
I
K
K
T
T
D
Q
Y
K
S
D
V
A
A
H
E
A
E
V
A
K
I
K
A
K
N
Q
---------------------------------------------------------------------------------------------------
22
Fugue
28.91
24%
-185
- C15 -
-
4OGQ
2
PETN_NOSS1
H:
[1-29]
------------
M
A
---
I
L
T
L
G
W
V
S
L
L
V
V
F
T
W
S
I
A
M
V
V
W
G
R
N
G
L
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
17
Fugue
26.83
20%
-45
- C15 -
-
1H2S
-
HTR2_NATPH
B:
[1-60]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
A
V
F
I
F
V
G
A
L
T
-------
V
L
F
G
A
I
A
Y
G
E
V
T
A
A
A
A
T
G
D
-------
A
A
A
V
Q
E
A
A
V
S
A
I
L
G
L
I
I
L
L
G
I
N
L
G
L
V
A
A
T
L
-----------------------------
16
Fugue
26.73
19%
47
- C14 -
-
2XFD
2
?
A:
[3-111]
-----
N
S
I
T
V
R
A
R
G
VNG
Q
E
S
V
S
L
Q
V
G
G
T
T
V
Q
T
W
T
L
T
T
A
M
Q
D
Y
T
A
S
T
SL
T
G
E
I
R
V
A
F
T
N
D
A
T
G
R
D
V
Q
V
D
Y
I
V
V
N
G
Q
T
R
Q
A
E
N
Q
S
V
N
T
G
V
W
A
N
N
Q
C
G
GSGNSEWLHCN
G
Y
I
S
F
G
N
V
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------