@TOME V2.3
(Mar 2018)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : S8F6L4_TOXGM: (2017-06-15 )
MARFCGSPPPCSPKERPDDRPSPSSPPSLSSSAPLSLRASVSPASPSSRLSFPPISDLSYYSSRSPPSSSAFSSSSCASVALLIDEEEMASPFSHAGPASHPESPSRISAILRTLVHHGWLSRKTGMGVQQSEDASEKPQTEETHPAVSSLSPPTSSACGETQAAHTDGREQRRSLLGPATKSNAVPGVSECPSLCLYESPSDGASVSLSPPGEDGAPPVSSRLPACSSSEGRRLRDFDASVPRESPPAFPFYSTHPSLLVLPCGRLATDEELCFCHTAGYVSRVESVFPSLGSSLPRKAAKAGAAKGRGVPGEKEKKALHASLPDRFKKGRRWSSHNVDTDSKSTSCHSPSAASSADSSLSAQSSASSPSSRASFPLPSSLSVVSVSETPPSPFSRLNAASADSSSNAFDCHLSTHPRSLDGTQPALFPGSCGGEGNSGHPVSRSEALCEAETVASSEVHATPLAEVTRAPGTGFGGAAAAREEEKSEKREAVFPCSSPVSLSVLSTAPSTVASLEESSDARTACDAYAASLEAEPCAVTDAKPSAALPPALAVSSSCESHLSSEVTEELGNNGPASPALPQFVNLFGGDTFICPRTPHTARLAAGAALELCDLIYGSPTVERHKETRRKRQGLRRKESKGERHAERHRERQQQGGRQERHLEGDEELKAREGETEARLASGVSDEGGRGACSGVCDGRDKQDSEREDDTPAATEEHGGEDRRDDTPAATEEHGGEDRRDGPNEQRQENKVKRGFAIIRPPGHHACSHEAAGFCIYNNVALAANYLLANHGLSRVAILDWDVHHGNGTQDLFYNSSSVLYLSVHRFEKAKPVSASHGEALHASPSPGAGAAGPSPESPRASDSPAASGAAFYPGTGSLTETGVSVGRGYTINVPLSRGYTDGDMFWVFCGVIAPALTAFRPQAILVSAGFDAAAGDPLGGCLLSPALFAWMTRQVCRLADIHCEGKALFFLEGGYQGDVLGACVEACVAALVNLSEENKPEERHRPKETADTAEDAGKGEEKPVKRRESPRGARDRGRDCVDQTVQLCQKERRSRDENEAACSRSLLSGRLGETLARLDSGILQGVEEGVELPSTEGPSACGSPPSISLPASLRVHANPPGWPPFRVLSPSSASFPSPASPLSSYALPRLLEEPVAAFCPKCRHRVRKRTSLSATSSAGEALSRGASRRASACNSDLSFFVEKRKEPKFVPEPFPPAERWVVIPPSAVDVAMRDAGDVARWAPTATAETPRRKKGRGDRKKKGEKGRSEARKSGSRNANCEERDSHEDVALRLQGIASEVETETGRATPVSVSESCLSPCSNVLLPAFPADSARFGSTLRNPCPTVRSPGALSQGHGLPAVCPQFGSRPSSPSTVLSLSPLCKVWASSPASRPTEVSSACGPLSDEVTSLCPGFRLDAIEEGSQEMTNSQLPQVLGALSASSLAATPGPQCPTSPALVCAACGVPLETAETAFPSSCPASPTLSFSSFSAAASPASFVARPRSGSVSDHVRVGKTQNDGGRQLQKSVVCRQATYDTLRLVRRVHAGSPFFLPPLPPLPKTVKTKSVEAAREQTDGDAETAEQVSLCLREGGDFRDQATDQQSLAHAQPPDSASDGTETRHSTHGVRGSRASAAPEPRPKTPDLSATPSIASPLASSCSALSSSGPPHTSTTPCGSTSSFSSSLSVSASLLPASRTLANVLPAGLLSHVRGRIVGGRARGAREESEAALQRNETIEQGQLVKLCNWGEAAFYTWVQMHSKKGEPEETDSGEDVTVTLQALETLFGRLQRPRKNSRENSGELQRKSKDENPTGSETLAVHTTRMPRQEAVPSAVLSFDPQQVLDLLRIQPDGVAISEPPSASSVASDALSPSSVSSDVATELAKFMPRCHRVFWTHAWALAEPPSTRKTNCEGGRKRCHGDEGMGEKEGESRLPRSPTEPRDASVADVDRRSRSALNSSQQSVPQGSSGEASRSSSSSASSSCRGSSGPESRGAPLAFPASSACGSRFACAVALADLAQFVRPCVMDIKMGIQMYDPSCTDAGKIQRMQEKARGRSVGSHGFFICGVSAGAVDSGTARVSEEISTEAGKSKVLESETTEDLCGGSEACDECNRGAAQDAGQVAPSSLRPFVLSSQEAYAVTQDEAFLRVFTNFFCVNNSTELAARLIRKCLGKLATLQRFFERQKQVSFYGSSLLFVFDADPAPDRLPVLRDSSDGPPALSVRRTQYAGTTQTQRPPVLQQNDRRGGGNAARRRDAHRAADVECAECGRKREAVYDAIVESFGVYMVDFAHVNFSRKQHDRGYLFGLANLQRLFARVLHSLGSSPSPAIAEAAVVSEEETRANSSESGEKKNEAEPKHDREGRP

Atome Classification :

(75 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

E1Z_A_2(5G0H)
?
[Raw transfer]



TSN_A_5(5EEK)
?
[Raw transfer]



LBH_B_11(5EF8)
?
[Raw transfer]



5OG_A_10(5EEN)
?
[Raw transfer]



E1Z_A_2(5G0H)
?
[Raw transfer]



6XA_A_5(4ZUQ)
APHA_MYCRA
[Raw transfer]



5XA_B_16(4ZUP)
APHA_MYCRA
[Raw transfer]



6XA_B_12(4ZUQ)
APHA_MYCRA
[Raw transfer]



5OG_B_6(5EEN)
?
[Raw transfer]



5XA_A_7(4ZUP)
APHA_MYCRA
[Raw transfer]



TSN_A_10(5G0G)
?
[Raw transfer]



N4R_A_10(5G0J)
?
[Raw transfer]



LBH_A_6(5EF8)
?
[Raw transfer]



TSN_A_4(5EEF)
?
[Raw transfer]



SHH_C_18(3C0Z)

[Raw transfer]



TSN_A_10(5G0G)
?
[Raw transfer]



TSN_B_10(5EEF)
?
[Raw transfer]



3YP_D_8(1ZZ3)
HDAH_ALCSD
[Raw transfer]



XS6_B_12(4ZUO)
APHA_MYCRA
[Raw transfer]



FMT_B_7(5EEM)
?
[Raw transfer]



XS6_A_6(4ZUO)
APHA_MYCRA
[Raw transfer]



SHH_C_19(1ZZ1)
HDAH_ALCSD
[Raw transfer]



SHH_B_17(3C0Z)
HDAC7_HUMAN
[Raw transfer]



TSN_B_17(3C10)
HDAC7_HUMAN
[Raw transfer]



TSN_C_18(3C10)

[Raw transfer]



3YP_C_7(1ZZ3)
HDAH_ALCSD
[Raw transfer]



5OK_D_5(5EFB)
?
[Raw transfer]



3YP_A_5(1ZZ3)
HDAH_ALCSD
[Raw transfer]



9F4_C_10(4CBT)

[Raw transfer]



SHH_A_17(1ZZ1)
HDAH_ALCSD
[Raw transfer]



HA3_A_6(2VQV)
HDAC4_HUMAN
[Raw transfer]



9F4_A_4(4CBT)
HDAC4_HUMAN
[Raw transfer]



9F4_B_7(4CBT)
HDAC4_HUMAN
[Raw transfer]



TSN_A_16(3C10)
HDAC7_HUMAN
[Raw transfer]



5OJ_A_6(5EF7)
?
[Raw transfer]



S17_D_23(2VCG)
HDAH_ALCSD
[Raw transfer]



SHH_D_20(1ZZ1)
HDAH_ALCSD
[Raw transfer]



S17_B_12(2VCG)
HDAH_ALCSD
[Raw transfer]



SHH_A_16(3C0Z)
HDAC7_HUMAN
[Raw transfer]



SHH_B_18(1ZZ1)
HDAH_ALCSD
[Raw transfer]



S17_C_17(2VCG)
HDAH_ALCSD
[Raw transfer]



5OJ_B_10(5EF7)
?
[Raw transfer]



HA3_B_13(2VQV)

[Raw transfer]



TFG_B_12(2VQQ)

[Raw transfer]



OTF_A_3(5A2S)
HDAC4_HUMAN
[Raw transfer]



OTF_B_7(5A2S)

[Raw transfer]



CF3_C_19(2GH6)
HDAH_ALCSD
[Raw transfer]



CF3_D_20(2GH6)
HDAH_ALCSD
[Raw transfer]



CF3_A_17(2GH6)
HDAH_ALCSD
[Raw transfer]



TFG_B_12(2VQO)

[Raw transfer]



HA3_A_4(2VQM)

[Raw transfer]



TFG_A_7(2VQQ)
HDAC4_HUMAN
[Raw transfer]



FKS_B_13(4ZUM)
APHA_MYCRA
[Raw transfer]



FKS_A_6(4ZUM)
APHA_MYCRA
[Raw transfer]



TFG_A_8(2VQJ)

[Raw transfer]



FKS_D_6(5EFH)
?
[Raw transfer]



TFG_A_7(2VQO)
HDAC4_HUMAN
[Raw transfer]



FKS_A_13(5EFH)
?
[Raw transfer]



NU9_A_8(3ZNR)
HDAC7_HUMAN
[Raw transfer]



CHAIN_C_3(4QA5)
HDAC8_HUMAN
[Raw transfer]
-
NU7_A_8(3ZNS)
HDAC7_HUMAN
[Raw transfer]



NU7_B_13(3ZNS)
HDAC7_HUMAN
[Raw transfer]



NU7_C_18(3ZNS)

[Raw transfer]



EDO_A_4(5JI5)
?
[Raw transfer]



EDO_A_4(5JI5)
?
[Raw transfer]



SS9_A_3(4ZUN)
APHA_MYCRA
[Raw transfer]



SS9_B_13(4ZUN)
APHA_MYCRA
[Raw transfer]



MCM_F_10(5EFN)
?
[Raw transfer]



MCM_A_10(5EFK)
?
[Raw transfer]



MCM_E_15(5EFN)
?
[Raw transfer]
155 HHSearch 55.2039%-119 - C4 -5JI5 2.0 ?
179 Fugue 54.2724% 25 - C2 -5IKK - CLR3_SCHPO -
57 PsiBlast_CBE 54.2636%-122 - C4 -1ZZ0 - HDAH_ALCSD
55 PsiBlast_CBE 54.2336%-126 - C4 -1ZZ1 2.9 HDAH_ALCSD
43 PsiBlast_CBE 54.0036%-124 - C4 -2VCG 2.5 HDAH_ALCSD
48 PsiBlast_CBE 53.9536%-126 - C4 -2GH6 4.4 HDAH_ALCSD
49 PsiBlast_CBE 53.8736%-124 - C4 -1ZZ3 5.3 HDAH_ALCSD
59 PsiBlast_CBE 53.8636%-124 - C4 -1ZZ0 - HDAH_ALCSD
181 Fugue 53.4625% -19 * C2 *4QA5 4.9 HDAC8_HUMAN
42 PsiBlast_CBE 53.4436%-122 - C4 -2VCG 3.8 HDAH_ALCSD
20 PsiBlast_PDB 53.2836%-128 - C4 -1ZZ0 - HDAH_ALCSD
52 PsiBlast_CBE 53.2236%-122 - C4 -1ZZ3 3.3 HDAH_ALCSD
150 HHSearch 53.1540%-114 - C4 -1ZZ1 4.4 HDAH_ALCSD
50 PsiBlast_CBE 53.0136%-123 - C4 -1ZZ3 3.8 HDAH_ALCSD
53 PsiBlast_CBE 52.9836%-126 - C4 -1ZZ1 3.5 HDAH_ALCSD
45 PsiBlast_CBE 52.8836%-124 - C4 -2GH6 3.6 HDAH_ALCSD
46 PsiBlast_CBE 52.8436%-124 - C4 -2GH6 3.6 HDAH_ALCSD
41 PsiBlast_CBE 52.6036%-126 - C4 -2VCG 4.1 HDAH_ALCSD
56 PsiBlast_CBE 52.5136%-124 - C4 -1ZZ1 - HDAH_ALCSD -
54 PsiBlast_CBE 52.4536%-125 - C4 -1ZZ1 3.6 HDAH_ALCSD
153 HHSearch 51.7135% -57 - C4 -5G0G 4.5 ?
84 PsiBlast_CBE 51.4634%-113 - C4 -5JI5 3.0 ?
7 PsiBlast_PDB 50.2636% -61 - C4 -3C10 4.4 HDAC7_HUMAN
39 PsiBlast_CBE 49.9934% -60 - C4 -4CBT 6.8 HDAC4_HUMAN
22 PsiBlast_CBE 49.9233% -36 - C4 -2VQO 3.9
15 PsiBlast_PDB 49.6734% -68 - C4 -4CBT 6.8 HDAC4_HUMAN
30 PsiBlast_CBE 49.6636% -63 - C4 -3C0Z 3.8 HDAC7_HUMAN
6 PsiBlast_PDB 49.0736% -61 - C4 -3C0Z 3.0 HDAC7_HUMAN
8 PsiBlast_PDB 49.0036% -60 - C4 -3ZNR 7.2 HDAC7_HUMAN
23 PsiBlast_CBE 48.9836% -61 - C4 -3ZNS 7.0
10 PsiBlast_PDB 48.7832% -39 - C4 -2VQQ 4.5 HDAC4_HUMAN
2 PsiBlast_PDB 48.7733% -41 - C4 -2VQO 4.2 HDAC4_HUMAN
154 HHSearch 48.7239% -44 - C4 -5G0H 5.3 ?
34 PsiBlast_CBE 48.5034% -59 - C4 -5A2S 6.5
33 PsiBlast_CBE 48.4032% -41 - C4 -2VQQ 4.2
9 PsiBlast_PDB 48.3736% -63 - C4 -3ZNS 7.3 HDAC7_HUMAN
27 PsiBlast_CBE 48.2636% -63 - C4 -3C10 4.6
14 PsiBlast_PDB 47.6734% -57 - C4 -5A2S 6.7 HDAC4_HUMAN
24 PsiBlast_CBE 47.6036% -58 - C4 -3ZNS 6.7 HDAC7_HUMAN
28 PsiBlast_CBE 47.5736% -63 - C4 -3C10 3.9 HDAC7_HUMAN
67 PsiBlast_CBE 47.3935% -46 - C4 -5EF8 5.5 ?
12 PsiBlast_PDB 47.2532% -38 - C4 -2VQM 3.1
29 PsiBlast_CBE 47.1036% -65 - C4 -3C0Z 3.6
17 PsiBlast_PDB 46.9235% -46 - C4 -5G0H 5.3 ?
11 PsiBlast_PDB 46.8632% -37 - C4 -2VQJ 3.6
3 PsiBlast_PDB 46.7333% -39 - C4 -2VQV 3.8 HDAC4_HUMAN
21 PsiBlast_CBE 46.7033% -40 - C4 -2VQV 3.7
38 PsiBlast_CBE 46.4634% -62 - C4 -4CBT 7.0
69 PsiBlast_CBE 46.4235% -40 - C4 -5EF7 3.4 ?
18 PsiBlast_PDB 46.2335% -44 - C4 -5G0J 5.3 ?
68 PsiBlast_CBE 46.1535% -42 - C4 -5EF7 3.2 ?
79 PsiBlast_CBE 45.6235% -42 - C4 -5EFK 3.0 ?
19 PsiBlast_PDB 45.5736% -86 - C4 -5G0G 4.0 ?
74 PsiBlast_CBE 45.4535% -44 - C4 -5EEK 4.8 ?
62 PsiBlast_CBE 45.4535% -45 - C4 -5EFH 3.7 ?
81 PsiBlast_CBE 45.1535% -43 - C4 -5EFN 2.8 ?
61 PsiBlast_CBE 45.0035% -42 - C4 -5EFH 3.6 ?
80 PsiBlast_CBE 44.9535% -42 - C4 -5EFN 2.9 ?
65 PsiBlast_CBE 44.8335% -43 - C4 -5EFB 4.1 ?
66 PsiBlast_CBE 44.7535% -48 - C4 -5EF8 5.5 ?
77 PsiBlast_CBE 44.1835% -76 - C4 -5EEF 3.7 ?
71 PsiBlast_CBE 43.9435% -44 - C4 -5EEN 5.1 ?
78 PsiBlast_CBE 43.8535% -82 - C4 -5EEF 4.2 ?
70 PsiBlast_CBE 43.8435% -46 - C4 -5EEN 5.3 ?
72 PsiBlast_CBE 43.8135% -43 - C4 -5EEM 3.8 ?
87 PsiBlast_CBE 40.8232% -76 - C4 -4ZUQ 3.0 APHA_MYCRA
91 PsiBlast_CBE 40.5332% -77 - C4 -4ZUO 3.5 APHA_MYCRA
90 PsiBlast_CBE 39.9832% -76 - C4 -4ZUP 2.7 APHA_MYCRA
93 PsiBlast_CBE 39.9332% -76 - C4 -4ZUN 2.8 APHA_MYCRA
89 PsiBlast_CBE 39.6732% -77 - C4 -4ZUP 2.7 APHA_MYCRA
88 PsiBlast_CBE 39.6032% -74 - C4 -4ZUQ 3.0 APHA_MYCRA
95 PsiBlast_CBE 39.5632% -76 - C4 -4ZUM 3.6 APHA_MYCRA
96 PsiBlast_CBE 39.3832% -78 - C4 -4ZUM 3.5 APHA_MYCRA
94 PsiBlast_CBE 38.8532% -76 - C4 -4ZUN 2.6 APHA_MYCRA
92 PsiBlast_CBE 38.3232% -77 - C4 -4ZUO 3.6 APHA_MYCRA