@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : LinJ_15_1630: (2018-03-08 )
MPTKMAAADFEFGPPLGTGAFSKVVVGLYKPTNVRYAVKFISKRSILDAPTDEERTRMAEVARRETRMLLMCEHPNIVKFHASMQTTEDLLYVTELCEGGELLKHIERWGHIPLEAARHAIAELFSAVFYLHHGEKKSNSGPSGPAMKPLTVIHRDIKPENIMLSADKHLRLIDFGTAVVCQSADDKATGEETGSGRAQTFCGTTYYMSPELLESSYTCCASDYWGCGCVLYLMLVGQRPFDASTQYLLIKTILEKEPEFPEDMDPDAKDLIRKLLVKDPKARIGMKEIKRHPFLASVNLSTVANQDVADFWLRETPWVDEASISACMACQRPFGILRSKQFCHNCGRITCNSCIRDLRIIPESRWKAPQRVCTACAGTLNGVSTL

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_A_16(2BIY)
PDPK1_HUMAN
[Raw transfer]



ATP_A_15(1H1W)
PDPK1_HUMAN
[Raw transfer]



8H1_A_2(3ION)
PDPK1_HUMAN
[Raw transfer]



GOL_F_6(2PE2)
PDPK1_HUMAN
[Raw transfer]



LY4_A_17(1UU3)
PDPK1_HUMAN
[Raw transfer]



0XZ_A_2(4GV1)
AKT1_HUMAN
[Raw transfer]



ABQ_A_12(3RWP)
PDPK1_HUMAN
[Raw transfer]



LI8_A_4(1Z5M)
PDPK1_HUMAN
[Raw transfer]



GOL_E_5(2PE1)
PDPK1_HUMAN
[Raw transfer]



STU_A_10(1OKY)
PDPK1_HUMAN
[Raw transfer]



GOL_A_11(3RWP)
PDPK1_HUMAN
[Raw transfer]



253_A_4(2R7B)
PDPK1_HUMAN
[Raw transfer]



EDO_A_5(4RA5)
KPCT_HUMAN
[Raw transfer]
40 HHSearch 84.2539%-130 * C1 *5LVO - PDPK1_HUMAN -
25 HHSearch 81.3140%-121 - C1 -1UVR - PDPK1_HUMAN -
5 PsiBlast_PDB 79.2636%-115 - C1 -1H1W 5.4 PDPK1_HUMAN
10 PsiBlast_PDB 78.0736%-120 - C1 -3NUY - PDPK1_HUMAN -
13 PsiBlast_PDB 77.8936%-135 - C1 -3ION 8.9 PDPK1_HUMAN
4 PsiBlast_PDB 76.9036%-121 - C1 -2PE2 3.2 PDPK1_HUMAN
9 PsiBlast_PDB 76.6236%-120 - C1 -3NUU - PDPK1_HUMAN -
8 PsiBlast_PDB 76.5336%-117 - C1 -3NUS - PDPK1_HUMAN -
7 PsiBlast_PDB 76.5136%-118 - C1 -1UU9 - PDPK1_HUMAN -
6 PsiBlast_PDB 76.4736%-110 - C1 -1UVR - PDPK1_HUMAN -
14 PsiBlast_PDB 76.4236%-118 - C1 -2BIY 5.9 PDPK1_HUMAN
18 PsiBlast_PDB 76.4036%-119 - C1 -1UU7 - PDPK1_HUMAN -
12 PsiBlast_PDB 76.1536%-133 - C1 -2R7B 5.9 PDPK1_HUMAN
20 PsiBlast_PDB 75.6236%-120 - C1 -1OKY 7.6 PDPK1_HUMAN
1 PsiBlast_PDB 75.5836%-118 - C1 -1Z5M 7.4 PDPK1_HUMAN
2 PsiBlast_PDB 75.2636%-119 - C1 -2PE0 - PDPK1_HUMAN -
3 PsiBlast_PDB 75.1736%-119 - C1 -2PE1 3.1 PDPK1_HUMAN
15 PsiBlast_PDB 74.8836%-124 - C1 -3NAY - PDPK1_HUMAN -
17 PsiBlast_PDB 74.7436%-129 - C1 -1UU3 7.6 PDPK1_HUMAN
19 PsiBlast_PDB 74.0736%-124 - C1 -1UU8 - PDPK1_HUMAN -
16 PsiBlast_PDB 73.2836%-126 - C1 -3RWP 7.3 PDPK1_HUMAN
27 HHSearch 66.7833% -78 - C1 -4RA5 3.0 KPCT_HUMAN