@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : LinJ_26_2540: (2018-03-10 )
MSTGDLLTPGALWQDDANVFVCSGRRCGRRFNRLFCPKHHCRWCGRVYCDACAPKQTIYKRQLLRKCNRCRLPAVFRHSWNARTRGMDCTPFECIISYLTPRSITALLQSCHTMMSEFPVCGYPFYDSIQQRFPSFYPGAQIGRGTFGTVFKCEDRSAADHKRAILKCISKATNLTYTRWMGALTELRILESVNHPNVAHLLGAFQTREDLVIVMEAGEGGTARRAAACVREYGQAAEEAFTANIIEGVASGLDYLYREKHIIHRDIKLDNIVLSADYSTPMIIDFGLAEFVVNEEEQWYVVGGTRNYAAPESIAAVANGHVDMREPGITMHKGDLFSLGVVAYYLLSGHRPFRSRSFDKMHEEMRRGVACTGPLWDGVSSDARELVQALLSYDPAQRPDYAAIKENPFIMARAAGVKSIQMQRNARLLLDEEETHAEWVTLEPSDLREAVDEGESEVLLPLSTPQRWYHAYLPRFSLLHL

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_A_5(3IGO)
?
[Raw transfer]



AMP_A_6(4Y5Q)
?
[Raw transfer]



BK1_A_5(3NCG)
?
[Raw transfer]



GOL_A_4(4GV1)
AKT1_HUMAN
[Raw transfer]



GOL_A_4(3HZT)
?
[Raw transfer]



GOL_A_12(3IGO)
?
[Raw transfer]



J60_A_7(3HZT)
?
[Raw transfer]



EDO_A_3(3I7B)
?
[Raw transfer]



EDO_A_8(4DN5)
M3K14_HUMAN
[Raw transfer]
36 HHSearch 70.8929% -95 - C1 -4GV1 3.4 AKT1_HUMAN
24 HHSearch 66.2026%-111 - C1 -4XBR - INKA1_HUMAN (first) -
50 Fugue 64.4022% -26 - C1 -3CD3 - -
3 PsiBlast_PDB 63.7431% -82 - C1 -5JZN - DCLK1_HUMAN -
47 Fugue 63.0120% 10 - C1 -3C4Z - RK_BOVIN -
2 PsiBlast_PDB 62.3431% -87 - C1 -5JZJ - DCLK1_HUMAN -
27 HHSearch 61.8926% -75 - C1 -4WOT - ROCK2_HUMAN -
6 PsiBlast_PDB 61.2630% -70 - C1 -3DFA - ? -
35 HHSearch 60.6826% -76 - C1 -3V8S - ROCK1_HUMAN -
32 HHSearch 60.3825% -22 - C1 -2Y7J - PHKG2_HUMAN -
34 HHSearch 60.0525%-150 - C1 -4JXF - PLK4_HUMAN -
12 PsiBlast_PDB 59.7230% -60 - C1 -4Y5Q 4.3 ?
11 PsiBlast_PDB 59.3530% -66 - C1 -3NCG 5.6 ?
30 HHSearch 59.2425% -18 - C1 -2Y7J - PHKG2_HUMAN -
29 HHSearch 58.6725% -66 - C1 -2X4F - MYLK4_HUMAN -
9 PsiBlast_PDB 58.4130% -62 - C1 -3IGO 5.7 ?
7 PsiBlast_PDB 58.2230% -61 - C1 -2WEI - ? -
1 PsiBlast_PDB 58.1230% -74 - C1 -3IS5 - ? -
10 PsiBlast_PDB 58.0930% -62 - C1 -3MWU - ? -
8 PsiBlast_PDB 57.9230% -24 - C1 -3MA6 - ? -