@TOME V2.3
(Mar 2018)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : LinJ_27_1860: (2018-03-10 )
MQVNSLLERMRKVRQEKAAAAAAAPPAVTNATATVPAANAAIRDAPVSSAADADTAGGGGVVSSSLLTGVTVPAPPPVFASPSSARLEYRDNAKDPLCVPFTCDMIVPVLNALLSNQQHSSTSTVAAAASGGLNGAVVPMMTEAVNSIDATGGDTRDVSALSSASAEIPGAGRDSSGKESQSIVVAKAVVRMREVLAAQGPPQMPQKAAVESVPSITATGTATAAGAPVSSLRPSSASLFADAAYNTACAVARVDVSGAVRPICRDVNYYTRVGRISQGVYGVVFRAVTTADYERQHRQQSRHRVTRPGSAASSAAAPPGHVRTYALKHIKKMWLEDSQVGLPPYLMREIDLLLRLQHPNIMGALELVLLDPTPVPRRLASPPKSCSPSSSSSESPSSSSSLSSESPSTEQHAEEAAECDRALRRLRSTAEDTAGQNLAKKAKIDNAEEPLPQREEARPATQAQTKGEKGAAQDAAATRPLAAVGAASKAKDVFLVMDYCPYDLGSYMRRYATAAELYGDGDDCKSTHASAQVPYFHITPRNAHPQAAASYVARAKSIVYQILRAVAFLHDSRILHRDLKTSNVLLGEDGYVKVCDFGLGRLYREGQALTPTVVTLMYRAPELHFGVVDYSHKMDVWSVGCIFAELFLRRPLFHASTDSHHLLAVCEVLGIPTEESFPGLYHLPQTKTMMQSLPRWNRTSRLASLFQRGAVLPTVAHGDVPVAAEGALLPESGVDLLASVLQWNPRRRPSAAEALQHPFFKEEPLPCAPAELMRPMPWMDAAIAAGNAAPSAALVPEDRRDQPGSRGSQGCPSTATHMAPSTTGRPSSASVPPAMQHVADIPSGVEATVAAVSSASEGATAASPLASASPDTFPGGSRSVFVSDTVGGGYQQAISTRDYSGSDGDLAEEDEEEQRLQLHTRRSTRDQVEDDDDSDAETERVGRQARFLANQDRDE

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

EDO_A_3(1CKP)
CDK2_HUMAN
[Raw transfer]



DTQ_B_2(1DI8)
CDK2_HUMAN
[Raw transfer]



404_A_2(3PJ8)
CDK2_HUMAN
[Raw transfer]



P48_A_5(2WIH)
CDK2_HUMAN
[Raw transfer]



SBC_A_7(2BKZ)
CDK2_HUMAN
[Raw transfer]



WXV_A_5(2WXV)
CDK2_HUMAN
[Raw transfer]



GOL_A_3(5BYZ)
MK07_HUMAN
[Raw transfer]



889_A_6(2WPA)
CDK2_HUMAN
[Raw transfer]



106_A_2(1FVT)
CDK2_HUMAN
[Raw transfer]



P49_A_5(2WIP)
CDK2_HUMAN
[Raw transfer]



ATP_E_5(1FIN)
CDK2_HUMAN
[Raw transfer]



514_A_7(2C4G)
CDK2_HUMAN
[Raw transfer]



292_A_7(1VYW)
CDK2_HUMAN
[Raw transfer]
41 HHSearch 80.3735% -57 - C1 -1UNL - CDK5_HUMAN -
22 HHSearch 78.6033%-103 - C1 -1UA2 - CDK7_HUMAN -
39 HHSearch 75.4536% -77 - C- -3GBZ - ? -
24 HHSearch 74.9630% -74 - C1 -5BYZ 2.4 MK07_HUMAN
40 HHSearch 74.4129% -94 - C1 -4NM5 - GSK3B_HUMAN -
21 HHSearch 73.9730% -92 * C1 *1J1B - GSK3B_HUMAN -
35 HHSearch 73.7436% -78 - C1 -3GC0 - ? -
38 HHSearch 72.0528%-131 - C1 -4BGQ - CDKL5_HUMAN -
32 HHSearch 64.9827% 0 - C- -3EB0 - ? -
28 HHSearch 60.0128% -38 - C1 -2Y7J - PHKG2_HUMAN -
29 HHSearch 58.8428% -36 - C1 -2Y7J - PHKG2_HUMAN -
14 PsiBlast_PDB 57.7738%-150 - C1 -1CKP 3.1 CDK2_HUMAN
16 PsiBlast_PDB 56.5238%-146 - C1 -1DI8 5.7 CDK2_HUMAN
18 PsiBlast_PDB 56.0038%-149 - C1 -1FVT 4.8 CDK2_HUMAN
23 HHSearch 55.6424% -53 - C1 -1TKI - TITIN_HUMAN -
4 PsiBlast_PDB 54.2338% -78 - C1 -2BKZ 4.9 CDK2_HUMAN
27 HHSearch 54.0325% -29 - C1 -2X0G - DAPK1_HUMAN -
33 HHSearch 53.2725% -29 - C1 -4B4L - DAPK1_HUMAN -
6 PsiBlast_PDB 53.2538% -74 - C1 -2WIP 5.5 CDK2_HUMAN
42 HHSearch 52.6122% -61 - C1 -1KOB - ? -
13 PsiBlast_PDB 51.3838% -76 - C1 -1FIN 4.5 CDK2_HUMAN