@TOME V2.3
(Mar 2018)

Ref. - - Doc.
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Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : LinJ_29_0380: (2018-03-11 )
MGDSQHSSVHSRYGGGQSSIDVSSLMTVNVAGLRNSGVLSPLVWQTPRPTSSASLTMLGLNRRDVLSTSSLAPWSMTPKAGHQRQQGRGLEHGSVPTPTQSSSSSSQANDAATTAGSPFFAGAASLVASAEWAALITKLGDFYDFVVRLPGFHTDDRTAFSAMSSRGVDGDAEHKSYHSSELPRSPEPPGTLPPSLQQSRDPQRREVLFPDPAEAARQRKTVRSPKSCDASVTHEIVSASAVSVSSEASRRRNNNAGSLERNGKDEESEEDRPSTAPAAGPRRLNSTSRCLSQAPDAEAPPGVTTAFDRYLEQARHMILCADSSEVDRAVALDGLLMRCRELFDLLRDMYTLAHVPGATADRSHLSMVKVLPYDEVSTPSSTSVSSTSSIPPGPALRTQESNSDTKGVPLSSTTQPWNSQLPPLSWRPLTAATAARSKDAFERGRRTSVSSCSSSVACIEVLNNYYVMQLIGVGATGRVYLAVDRHTCKAFAMKTVPRHSRRAVGRRFPLAPMSASDSEALQLEGSMLRAVHIDGAAAHAAGSSTTTNAPLALVRPFSMSVASVRPATRREGTRDSMDVSLCEAALDSLIHVAATSHPSDAAIPFVESVTASSSAMTPGSGDVEAPNTSKKPPPQTSSSKHLNGSSLQICAGGAGLHTTVSRSTNAGESVGGDSVVKSVKSAHSSELPAVEREIRVMRRVCNHPHVAQLKEVIDDDKEDSVHLVMTYAENGPLTVMHGFDAALGCAPCDVVRPFSRCARLLHQLAEALIYVHRQRIVHNDVKPDNILLTEADNILLTDFGESVLISKKLPQMPAAHMSIGAAGGEGLNASVLVPHNRWKSSRGANDSWATLSTADRSPCSSSPAGHTANTSQMMAETSFLPDSSMFLAAGVDVEGRLKGNRSAIGTPAFAAPELIMSSTCSYDSDAWSFGVVLYSVIFGRLPFAAATISETFSEILNSALSFPALEEVPERVGMTETDYHQWVELCTKLLVREPRQRLPLSAVLRHPLFRTPAAVGAKPSTSATGGVEMPRGRRPPSRIHSDLSSAPTLWWPNHSSQASRPVSDKEGSPLMSRAARAAMPPLMSREGAASVSAAANRRCSTEGSKSPLTRGGAVREAVLDRHRLQTMAGSSQASSIFASSGTSMASLSPPAASAGFGRRSKPTVAEAAAPQMWPEIRPLQAARLQCQCAWPNSSPAGRHSFSGASSVHTASFTATGHMGRPREHTLVYKQGFASQSASAIQSPINRSFFSTSTPFKESPPDRVVTPGIQLTSCTDFTSPLPCLLTRAGSSTPDLGTEDHEEDQQDESGKEESRSSNVAGAVIALAAVAAPAPPASPPATSSAGRPRSVAAARGAREDTAAVGPCVQRRCSEEEPCEGDGSSGAGCNFSYWGSSNDVADSGDSEDERRKQEINDKASQLPKPPLRPPSGRSAHSSSAVRPLASLQEVVAQHVKPKGRGEHLKSVAGVPYGDSTIAPGSPDNLSATRELVQKARETESPVQQRASKSSPLSNNLVVNSTACGGSSSPCPSPLKSTSEIPPAQAKKSRFWCHR

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GUI_A_3(5JZN)
DCLK1_HUMAN
[Raw transfer]
31 HHSearch 68.0226%-113 - C1 -4XBR - INKA1_HUMAN (first) -
46 Fugue 65.9819% -16 - C1 -1KOB - ? -
26 HHSearch 64.1827%-180 - C1 -4JXF - PLK4_HUMAN -
41 HHSearch 64.0624% -51 - C1 -1KOB - ? -
24 HHSearch 61.7527% 2 - C1 -2Y7J - PHKG2_HUMAN -
33 HHSearch 61.6830% -83 - C1 -5JZN 4.5 DCLK1_HUMAN
55 Fugue 61.0624% 9 - C1 -4AW2 - MRCKA_RAT -
23 HHSearch 60.8727% 4 - C1 -2Y7J - PHKG2_HUMAN -
22 HHSearch 59.4122% -65 - C1 -1TKI - TITIN_HUMAN -
39 HHSearch 58.6124% -18 - C1 -3C0G - CSKP_HUMAN -
27 HHSearch 58.4725% 0 - C- -4PDP - ? -
36 HHSearch 58.2027% -72 - C1 -5IG1 - ? -
40 HHSearch 57.9627% -66 - C1 -5IG1 - ? -
45 HHSearch 57.2225%-126 - C1 -2I0E - KPCB_HUMAN -
37 HHSearch 56.7424% -18 * C1 *3C0I - CSKP_HUMAN -
47 Fugue 56.5620% -32 - C1 -1TKI - TITIN_HUMAN -
38 HHSearch 56.2224% 14 - C1 -2X0G - DAPK1_HUMAN -
42 HHSearch 56.1624% -31 - C1 -1J1B - GSK3B_HUMAN -
25 HHSearch 56.1029% -87 - C1 -3V8S - ROCK1_HUMAN -
49 Fugue 52.1919% 25 - C1 -2RIO - IRE1_YEAST -