@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : LinJ_29_2830: (2018-03-11 )
MSLRSAMHASDVDDAGRALQSTQRSIVSISRLTNEMSEVRAMSEGSFGVVKCYRHDFDKLEYAVKQTKRPICGESNLQQQLQEIYALSSFPHRHIVRYFDGWVEDRAVFVRLEKLDDCMASLPPPVSESVLTAMLHQTSTALYELHSHDVVHMDVKPENILRRQLDADTFIFKLCDFGLARPLNGKDSVTGEHFLGLNDDDGDRRYMSPELLKNLHDVVGPPADMYALGKSCEAMMTATEDPSNTSARHLESYSPAFIALIESMLCEDPARRPSAFQVVQATLPERLLSDGGLLELQRRIDAIRCEISDLDASDNDVMSSPRT

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

D15_A_4(4AGU)
CDKL1_HUMAN
[Raw transfer]



DKI_A_2(4AAA)
CDKL2_HUMAN
[Raw transfer]



EDO_A_11(3P1A)
PMYT1_HUMAN
[Raw transfer]



EDO_A_8(4DN5)
M3K14_HUMAN
[Raw transfer]
20 PsiBlast_PDB 84.2423% -22 - C1 -2V7O - KCC2G_HUMAN -
15 PsiBlast_PDB 75.5629% -16 - C1 -3P1A 3.2 PMYT1_HUMAN
31 HHSearch 74.5223% -12 - C1 -3KK8 - KCC2D_CAEEL -
30 HHSearch 74.1924% -10 - C1 -2BDW - KCC2D_CAEEL -
12 PsiBlast_PDB 71.1026% -48 - C1 -3DAE - SNF1_YEAST -
37 HHSearch 70.1124% -11 - C1 -2VN9 - KCC2D_HUMAN -
35 HHSearch 70.0023% -30 - C1 -1U5R - TAOK2_RAT -
25 HHSearch 69.0521% -21 - C1 -3C0I - CSKP_HUMAN -
33 HHSearch 68.6624% -4 - C1 -4NIF - KS6A1_HUMAN -
46 Fugue 68.6522% 20 - C1 -1KOB - ? -
27 HHSearch 68.1021% -17 - C1 -3C0G - CSKP_HUMAN -
39 HHSearch 67.1024% 10 - C1 -2Y7J - PHKG2_HUMAN -
42 HHSearch 66.7521% -24 - C1 -5J5T - M4K3_HUMAN -
5 PsiBlast_PDB 66.5928% 27 - C1 -3CQE - -
21 HHSearch 66.0024% 0 - C- -2WEL - KCC2D_HUMAN -
1 PsiBlast_PDB 66.0028% 32 - C1 -1X8B - -
44 HHSearch 65.9422% -21 - C1 -4XBR - INKA1_HUMAN (first) -
2 PsiBlast_PDB 65.7528% 31 - C1 -2Z2W - -
3 PsiBlast_PDB 65.2828% 33 - C1 -3BI6 - -
38 HHSearch 65.2524% 4 * C1 *2Y7J - PHKG2_HUMAN -