@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : LinJ_30_1060: (2018-03-11 )
MNSQASSSPLPPAASCVQFRPEQLQLGTGIPLGSGAISQVVQCRLHCAAAPLLPVVVKVVSKIQVLQQGKVQSVMNEKATLQRLAPFPYVVRLYGTAQSEDELYFVLEWLPHGDLLQHIRYVAQERVRQYNEEEAAAGSTASMPSPGAVAGGTTGSVPDGAPVAEASASTGPSKRATAIPASSTALRCLDFHDIQLITAQLVLALEHTADRGVVLRDLKPENVAFDEKYRACLLDFDTADLEGAVNMPETNGGVACPPPVDAAAVDEAESSDGGGGHAAAENGGASSSSRRRRLTVSQIHRMRRKTASFCGTAHYVSPEMVGECKWSFSSDLWALGALVYELVYGEHLFSGMTPFEVLQKVVHGSYVERHELFPHIHFADDADGEAEQCCGERRFAAVKDFIQQLLLTDPQKRLGVHPDTHRFDATALRRHALFDGFQWEPVEAQLRTFRMRRFDLGSSKATSAASGDASCDAREASNDASGASSAALKSLVAACVDPSASLASCYHILPFNDPAYAEYVYRATADANPFEQFFTQEDTEPAPTAAAASHEAAGSAGGSAPGAVPTPAVNSRPEAASVVDDDEVDDVIDDVGMHYTGRPADKYFQDYRDTP

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

EDO_A_5(4RA5)
KPCT_HUMAN
[Raw transfer]
41 HHSearch 79.9927%-112 - C1 -4WIH - KAPCA_CRIGR -
42 HHSearch 78.8326%-112 - C1 -1RDQ - KAPCA_MOUSE -
52 Fugue 76.0224% -4 - C1 -4AW2 - MRCKA_RAT -
35 HHSearch 74.8228%-132 - C1 -2I0E - KPCB_HUMAN -
31 HHSearch 74.2928%-116 - C1 -4RA5 3.0 KPCT_HUMAN
37 HHSearch 72.4828%-111 - C1 -5F9E - KPCT_HUMAN -
26 HHSearch 70.9227%-130 - C1 -3TXO - -
29 HHSearch 69.7828% 0 - C- -2I0E - -
34 HHSearch 68.4225%-121 - C1 -5LI9 - KPCI_HUMAN -
44 HHSearch 68.0226%-140 - C1 -5LOH - GWL_HUMAN -
40 HHSearch 66.5026% -63 - C1 -3WF7 - KS6B1_HUMAN -
32 HHSearch 65.2027% -35 - C- -4OTD - PKN1_HUMAN -
24 HHSearch 64.8524% -59 - C1 -4GV1 - AKT1_HUMAN -
23 HHSearch 64.4726% -93 - C1 -2VD5 - DMPK_HUMAN -
38 HHSearch 63.0928% -57 - C1 -1VZO - KS6A5_HUMAN -
21 HHSearch 61.6123% -82 - C1 -4WOT - ROCK2_HUMAN -
33 HHSearch 61.2823% -85 - C1 -4LQS - CBK1_YEAST -
27 HHSearch 60.5622% -76 * C1 *3V8S - ROCK1_HUMAN -
36 HHSearch 59.2226% 0 - C- -1FOT - KAPA_YEAST -
28 HHSearch 58.0623% -85 - C1 -4LQQ - CBK1_YEAST -